RNA–Protein interactions for RNA: ENST00000513431.5

MGAT1-222, Transcript of mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, human

TSL 2

Gene MGAT1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MGAT1-222	ENST00000513431	IGLV4-60	A0A075B6I1	120 aa		11.46	□□□□□ -0.57
MGAT1-222	ENST00000513431	PANO1	I0J062	215 aa		11.46	□□□□□ -0.57
MGAT1-222	ENST00000513431	AMT	P48728	403 aa		11.46	□□□□□ -0.57
MGAT1-222	ENST00000513431	HNRNPA3	P51991	378 aa	Known RBP	11.46	□□□□□ -0.57
MGAT1-222	ENST00000513431	MEF2B	Q02080	365 aa	Predicted RBP	11.46	□□□□□ -0.57
MGAT1-222	ENST00000513431	RAB19	A4D1S5	217 aa		11.45	□□□□□ -0.58
MGAT1-222	ENST00000513431	LYZL1	Q6UWQ5	148 aa		11.45	□□□□□ -0.58
MGAT1-222	ENST00000513431	RNF185	Q96GF1	192 aa		11.45	□□□□□ -0.58
MGAT1-222	ENST00000513431	MED9	Q9NWA0	146 aa		11.45	□□□□□ -0.58
MGAT1-222	ENST00000513431	NTF3	P20783	257 aa		11.44	□□□□□ -0.58
MGAT1-222	ENST00000513431	CIRBP	Q14011	172 aa	Known RBP	11.44	□□□□□ -0.58
MGAT1-222	ENST00000513431	CFAP161	Q6P656	301 aa		11.44	□□□□□ -0.58
MGAT1-222	ENST00000513431		Q6ZRU5	148 aa		11.43	□□□□□ -0.58
MGAT1-222	ENST00000513431	GFRA4	Q9GZZ7	299 aa		11.43	□□□□□ -0.58
MGAT1-222	ENST00000513431	PKHD1L1	Q86WI1	4243 aa		11.42	□□□□□ -0.58
MGAT1-222	ENST00000513431	TWIST1	Q15672	202 aa		11.42	□□□□□ -0.58
MGAT1-222	ENST00000513431	C9orf62	Q8N4C0	152 aa		11.42	□□□□□ -0.58
MGAT1-222	ENST00000513431	UBR4	Q5T4S7	5183 aa		11.42	□□□□□ -0.58
MGAT1-222	ENST00000513431	CTRL	P40313	264 aa		11.41	□□□□□ -0.58
MGAT1-222	ENST00000513431	AMMECR1L	Q6DCA0	310 aa		11.41	□□□□□ -0.58
MGAT1-222	ENST00000513431		A0A087WYN8	130 aa		11.4	□□□□□ -0.58
MGAT1-222	ENST00000513431	IGKV3OR2-268	A0A0C4DH90	116 aa		11.4	□□□□□ -0.58
MGAT1-222	ENST00000513431	GAGE12H	A6NDE8	117 aa		11.4	□□□□□ -0.58
MGAT1-222	ENST00000513431	BCL2	P10415	239 aa		11.4	□□□□□ -0.58
MGAT1-222	ENST00000513431	SMIM15	Q7Z3B0	74 aa		11.4	□□□□□ -0.58
MGAT1-222	ENST00000513431	SPACA4	Q8TDM5	124 aa		11.4	□□□□□ -0.58
MGAT1-222	ENST00000513431	C7orf33	Q8WU49	177 aa		11.4	□□□□□ -0.58
MGAT1-222	ENST00000513431	TRBV20OR9-2	A0A075B6H5	130 aa		11.39	□□□□□ -0.59
MGAT1-222	ENST00000513431	CHTF8	P0CG12	524 aa		11.39	□□□□□ -0.59
MGAT1-222	ENST00000513431	TAGLN2	P37802	199 aa	Known RBP	11.39	□□□□□ -0.59
MGAT1-222	ENST00000513431	RPP21	Q9H633	154 aa	Known RBP	11.39	□□□□□ -0.59
MGAT1-222	ENST00000513431	SLPI	P03973	132 aa		11.38	□□□□□ -0.59
MGAT1-222	ENST00000513431	NUDT10	Q8NFP7	164 aa		11.38	□□□□□ -0.59
MGAT1-222	ENST00000513431	NUDT11	Q96G61	164 aa		11.38	□□□□□ -0.59
MGAT1-222	ENST00000513431	CNFN	Q9BYD5	112 aa		11.38	□□□□□ -0.59
MGAT1-222	ENST00000513431	NCR2	O95944	276 aa		11.37	□□□□□ -0.59
MGAT1-222	ENST00000513431	RPS10	P46783	165 aa	Known RBP	11.37	□□□□□ -0.59
MGAT1-222	ENST00000513431	RNASEK	Q6P5S7	137 aa	Known RBP	11.37	□□□□□ -0.59
MGAT1-222	ENST00000513431	TRAV26-2	A0A0B4J265	109 aa		11.36	□□□□□ -0.59
MGAT1-222	ENST00000513431	APCS	P02743	223 aa		11.36	□□□□□ -0.59
MGAT1-222	ENST00000513431	TEX261	Q6UWH6	196 aa		11.36	□□□□□ -0.59
MGAT1-222	ENST00000513431	C15orf56	Q8N910	161 aa		11.36	□□□□□ -0.59
MGAT1-222	ENST00000513431	GATD1	Q8NB37	220 aa		11.36	□□□□□ -0.59
MGAT1-222	ENST00000513431	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.36	□□□□□ -0.59
MGAT1-222	ENST00000513431	PLAC8	Q9NZF1	115 aa		11.36	□□□□□ -0.59
MGAT1-222	ENST00000513431		H7C423	109 aa		11.35	□□□□□ -0.59
MGAT1-222	ENST00000513431	NDUFS6	O75380	124 aa	Known RBP	11.35	□□□□□ -0.59
MGAT1-222	ENST00000513431	COX6A2	Q02221	97 aa		11.35	□□□□□ -0.59
MGAT1-222	ENST00000513431	HIGD2B	Q4VC39	106 aa		11.35	□□□□□ -0.59
MGAT1-222	ENST00000513431	RNASE7	Q9H1E1	156 aa	Known RBP	11.35	□□□□□ -0.59
MGAT1-222	ENST00000513431	MT1HL1	P0DM35	61 aa		11.34	□□□□□ -0.59
MGAT1-222	ENST00000513431	MAJIN	Q3KP22	176 aa		11.34	□□□□□ -0.59
MGAT1-222	ENST00000513431	IGKV2-24	A0A0C4DH68	120 aa		11.33	□□□□□ -0.6
MGAT1-222	ENST00000513431	PHOX2A	O14813	284 aa		11.33	□□□□□ -0.6
MGAT1-222	ENST00000513431		Q6ZNX1	250 aa		11.33	□□□□□ -0.6
MGAT1-222	ENST00000513431	RPL39L	Q96EH5	51 aa	Known RBP	11.33	□□□□□ -0.6
MGAT1-222	ENST00000513431	BTF3L4	Q96K17	158 aa		11.33	□□□□□ -0.6
MGAT1-222	ENST00000513431	PKIG	Q9Y2B9	76 aa		11.33	□□□□□ -0.6
MGAT1-222	ENST00000513431	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.32	□□□□□ -0.6
MGAT1-222	ENST00000513431	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.32	□□□□□ -0.6
MGAT1-222	ENST00000513431	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.32	□□□□□ -0.6
MGAT1-222	ENST00000513431	FGF6	P10767	208 aa		11.32	□□□□□ -0.6
MGAT1-222	ENST00000513431	ZNF25	P17030	456 aa	Predicted RBP	11.32	□□□□□ -0.6
MGAT1-222	ENST00000513431	SLC51B	Q86UW2	128 aa		11.32	□□□□□ -0.6
MGAT1-222	ENST00000513431	GTSF1	Q8WW33	167 aa		11.32	□□□□□ -0.6
MGAT1-222	ENST00000513431	TMEM101	Q96IK0	257 aa		11.32	□□□□□ -0.6
MGAT1-222	ENST00000513431	SDHAF1	A6NFY7	115 aa		11.31	□□□□□ -0.6
MGAT1-222	ENST00000513431		K7EN84	100 aa		11.31	□□□□□ -0.6
MGAT1-222	ENST00000513431	PRSS3P2	Q8NHM4	247 aa		11.31	□□□□□ -0.6
MGAT1-222	ENST00000513431	OCC1	Q8TAD7	63 aa		11.31	□□□□□ -0.6
MGAT1-222	ENST00000513431	BORCS7	Q96B45	105 aa		11.3	□□□□□ -0.6
MGAT1-222	ENST00000513431	LINC00474	Q9P2X8	69 aa		11.3	□□□□□ -0.6
MGAT1-222	ENST00000513431		I3L3M4	83 aa		11.29	□□□□□ -0.6
MGAT1-222	ENST00000513431	GATC	O43716	136 aa	Known RBP	11.29	□□□□□ -0.6
MGAT1-222	ENST00000513431	PMCH	P20382	165 aa		11.29	□□□□□ -0.6
MGAT1-222	ENST00000513431	STPG4	Q8N801	248 aa		11.29	□□□□□ -0.6
MGAT1-222	ENST00000513431	OR5A1	Q8NGJ0	315 aa		11.29	□□□□□ -0.6
MGAT1-222	ENST00000513431		A8MWL6	223 aa		11.28	□□□□□ -0.6
MGAT1-222	ENST00000513431	XCL1	P47992	114 aa		11.28	□□□□□ -0.6
MGAT1-222	ENST00000513431	FOXI1	Q12951	378 aa		11.28	□□□□□ -0.6
MGAT1-222	ENST00000513431	FOXA3	P55318	350 aa	Predicted RBP	11.27	□□□□□ -0.61
MGAT1-222	ENST00000513431	PRR3	P79522	188 aa	Known RBP	11.27	□□□□□ -0.61
MGAT1-222	ENST00000513431	TCTE3	Q8IZS6	198 aa		11.27	□□□□□ -0.61
MGAT1-222	ENST00000513431	LYPD6B	Q8NI32	183 aa		11.27	□□□□□ -0.61
MGAT1-222	ENST00000513431	IGHV1-58	A0A0C4DH39	117 aa		11.26	□□□□□ -0.61
MGAT1-222	ENST00000513431	TMEM250	H0YL14	139 aa		11.26	□□□□□ -0.61
MGAT1-222	ENST00000513431	MRAP2	Q96G30	205 aa		11.26	□□□□□ -0.61
MGAT1-222	ENST00000513431	FAM210A	Q96ND0	272 aa		11.26	□□□□□ -0.61
MGAT1-222	ENST00000513431	ST20	Q9HBF5	79 aa		11.26	□□□□□ -0.61
MGAT1-222	ENST00000513431		A0A096LNI7	61 aa		11.25	□□□□□ -0.61
MGAT1-222	ENST00000513431	TRBV6-5	A0A0K0K1A5	114 aa		11.25	□□□□□ -0.61
MGAT1-222	ENST00000513431	CCL25	O15444	150 aa		11.25	□□□□□ -0.61
MGAT1-222	ENST00000513431	SS18	Q15532	418 aa		11.25	□□□□□ -0.61
MGAT1-222	ENST00000513431	FAM231D	Q6ZW35	169 aa		11.25	□□□□□ -0.61
MGAT1-222	ENST00000513431	CARD19	Q96LW7	228 aa		11.25	□□□□□ -0.61
MGAT1-222	ENST00000513431	LINC00959	A0A1B0GUT2	108 aa		11.24	□□□□□ -0.61
MGAT1-222	ENST00000513431	CT83	Q5H943	113 aa		11.24	□□□□□ -0.61
MGAT1-222	ENST00000513431	ZNF561-AS1	K7EIQ3	104 aa		11.23	□□□□□ -0.61
MGAT1-222	ENST00000513431	CEBPG	P53567	150 aa		11.23	□□□□□ -0.61
MGAT1-222	ENST00000513431	BLOC1S1	P78537	153 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms