RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 UFSP1Q6NVU6 142 aa9.02□□□□□ -0.97
SPCS3-204ENST00000513139 HIGD1CA8MV81 97 aa9.01□□□□□ -0.97
SPCS3-204ENST00000513139 FOXA3P55318 350 aaPredicted RBP9.01□□□□□ -0.97
SPCS3-204ENST00000513139 CACNG7P62955 275 aa9.01□□□□□ -0.97
SPCS3-204ENST00000513139 PNRC1Q12796 327 aaPredicted RBP9.01□□□□□ -0.97
SPCS3-204ENST00000513139 C14orf177Q52M58 125 aa9.01□□□□□ -0.97
SPCS3-204ENST00000513139 FAM74A4Q5TZK3 123 aa9.01□□□□□ -0.97
SPCS3-204ENST00000513139 C14orf178Q8N769 122 aaPredicted RBP9.01□□□□□ -0.97
SPCS3-204ENST00000513139 IGKV2D-24A0A075B6R9 120 aa9□□□□□ -0.97
SPCS3-204ENST00000513139 LINC00694P0DN24 101 aa9□□□□□ -0.97
SPCS3-204ENST00000513139 TWIST1Q15672 202 aa9□□□□□ -0.97
SPCS3-204ENST00000513139 WDR73Q6P4I2 378 aa9□□□□□ -0.97
SPCS3-204ENST00000513139 NUP35Q8NFH5 326 aa9□□□□□ -0.97
SPCS3-204ENST00000513139 GFRA4Q9GZZ7 299 aa9□□□□□ -0.97
SPCS3-204ENST00000513139 SMIM27A0A1W2PRY6 76 aa8.99□□□□□ -0.97
SPCS3-204ENST00000513139 MT-ND4LP03901 98 aa8.99□□□□□ -0.97
SPCS3-204ENST00000513139 ATRAIDQ6UW56 229 aa8.99□□□□□ -0.97
SPCS3-204ENST00000513139 ZFP2Q6ZN57 461 aa8.99□□□□□ -0.97
SPCS3-204ENST00000513139 CNFNQ9BYD5 112 aa8.99□□□□□ -0.97
SPCS3-204ENST00000513139 Q9UF83 564 aa8.99□□□□□ -0.97
SPCS3-204ENST00000513139 CARHSP1Q9Y2V2 147 aaKnown RBP8.99□□□□□ -0.97
SPCS3-204ENST00000513139 KIF25-AS1Q9Y6Z4 181 aa8.99□□□□□ -0.97
SPCS3-204ENST00000513139 URGCP-MRPS24S4R325 110 aa8.99□□□□□ -0.97
SPCS3-204ENST00000513139 FAM231BA6NCW3 169 aa8.98□□□□□ -0.97
SPCS3-204ENST00000513139 PPP1R2P9O14990 202 aa8.98□□□□□ -0.97
SPCS3-204ENST00000513139 NAT8BQ9UHF3 227 aa8.98□□□□□ -0.97
SPCS3-204ENST00000513139 A0A1B0GUT8 65 aa8.97□□□□□ -0.97
SPCS3-204ENST00000513139 APOC3P02656 99 aa8.97□□□□□ -0.97
SPCS3-204ENST00000513139 NIT1Q86X76 327 aa8.97□□□□□ -0.97
SPCS3-204ENST00000513139 DNAJC30Q96LL9 226 aa8.97□□□□□ -0.97
SPCS3-204ENST00000513139 AP1S3Q96PC3 154 aa8.97□□□□□ -0.97
SPCS3-204ENST00000513139 F5H697 171 aa8.96□□□□□ -0.98
SPCS3-204ENST00000513139 RHODO00212 210 aa8.96□□□□□ -0.98
SPCS3-204ENST00000513139 SMIM17P0DL12 118 aa8.96□□□□□ -0.98
SPCS3-204ENST00000513139 ELOBQ15370 118 aa8.96□□□□□ -0.98
SPCS3-204ENST00000513139 CLRN3Q8NCR9 226 aa8.96□□□□□ -0.98
SPCS3-204ENST00000513139 BORCS7Q96B45 105 aa8.96□□□□□ -0.98
SPCS3-204ENST00000513139 CHCHD7Q9BUK0 85 aa8.96□□□□□ -0.98
SPCS3-204ENST00000513139 KLK12Q9UKR0 248 aa8.96□□□□□ -0.98
SPCS3-204ENST00000513139 C7orf77A4D0Y5 90 aa8.95□□□□□ -0.98
SPCS3-204ENST00000513139 GAGE12JA6NER3 117 aa8.95□□□□□ -0.98
SPCS3-204ENST00000513139 MGPP08493 103 aa8.95□□□□□ -0.98
SPCS3-204ENST00000513139 TRGC1P0CF51 173 aa8.95□□□□□ -0.98
SPCS3-204ENST00000513139 Q0VG73 95 aa8.95□□□□□ -0.98
SPCS3-204ENST00000513139 GAGE1Q13065 139 aa8.95□□□□□ -0.98
SPCS3-204ENST00000513139 GAGE4Q13068 117 aa8.95□□□□□ -0.98
SPCS3-204ENST00000513139 GAGE5Q13069 117 aa8.95□□□□□ -0.98
SPCS3-204ENST00000513139 ZNF56Q15929 161 aa8.95□□□□□ -0.98
SPCS3-204ENST00000513139 GAGE13Q4V321 117 aa8.95□□□□□ -0.98
SPCS3-204ENST00000513139 UBE2WQ96B02 151 aa8.95□□□□□ -0.98
SPCS3-204ENST00000513139 RAB4BP61018 213 aa8.94□□□□□ -0.98
SPCS3-204ENST00000513139 RIGQ13278 110 aa8.94□□□□□ -0.98
SPCS3-204ENST00000513139 DGAT2L7PQ6IED9 249 aa8.94□□□□□ -0.98
SPCS3-204ENST00000513139 DPH3P1Q9H4G8 78 aa8.94□□□□□ -0.98
SPCS3-204ENST00000513139 CAMPP49913 170 aa8.93□□□□□ -0.98
SPCS3-204ENST00000513139 NDUFA5Q16718 116 aa8.93□□□□□ -0.98
SPCS3-204ENST00000513139 C21orf62-AS1Q17RA5 79 aa8.93□□□□□ -0.98
SPCS3-204ENST00000513139 MRPL54Q6P161 138 aaKnown RBP8.93□□□□□ -0.98
SPCS3-204ENST00000513139 CTDSP1Q9GZU7 261 aa8.93□□□□□ -0.98
SPCS3-204ENST00000513139 RPS10P5Q9NQ39 176 aa8.93□□□□□ -0.98
SPCS3-204ENST00000513139 A0A087WX48 190 aa8.92□□□□□ -0.98
SPCS3-204ENST00000513139 SUMO4Q6EEV6 95 aa8.92□□□□□ -0.98
SPCS3-204ENST00000513139 SMIM15Q7Z3B0 74 aa8.92□□□□□ -0.98
SPCS3-204ENST00000513139 C9orf163Q8N9P6 203 aa8.92□□□□□ -0.98
SPCS3-204ENST00000513139 C1orf43Q9BWL3 253 aa8.92□□□□□ -0.98
SPCS3-204ENST00000513139 TRAV26-2A0A0B4J265 109 aa8.91□□□□□ -0.98
SPCS3-204ENST00000513139 M0QY20 66 aa8.91□□□□□ -0.98
SPCS3-204ENST00000513139 RHEBQ15382 184 aa8.91□□□□□ -0.98
SPCS3-204ENST00000513139 KCNIP4Q6PIL6 250 aa8.91□□□□□ -0.98
SPCS3-204ENST00000513139 SVBPQ8N300 66 aa8.91□□□□□ -0.98
SPCS3-204ENST00000513139 TMEM191AQ9H0A3 160 aa8.91□□□□□ -0.98
SPCS3-204ENST00000513139 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.91□□□□□ -0.98
SPCS3-204ENST00000513139 A0A1B0GXF2 115 aa8.9□□□□□ -0.98
SPCS3-204ENST00000513139 AMN1Q8IY45 258 aa8.9□□□□□ -0.98
SPCS3-204ENST00000513139 GATD1Q8NB37 220 aa8.9□□□□□ -0.98
SPCS3-204ENST00000513139 NEXN-AS1Q8NBZ9 246 aa8.9□□□□□ -0.98
SPCS3-204ENST00000513139 RNF185Q96GF1 192 aa8.9□□□□□ -0.98
SPCS3-204ENST00000513139 IMMP2LQ96T52 175 aa8.9□□□□□ -0.98
SPCS3-204ENST00000513139 TRBV10-1A0A0K0K1A3 114 aa8.89□□□□□ -0.99
SPCS3-204ENST00000513139 USP17L23D6RBM5 183 aa8.89□□□□□ -0.99
SPCS3-204ENST00000513139 GAS8-AS1O95177 125 aa8.89□□□□□ -0.99
SPCS3-204ENST00000513139 SNAPINO95295 136 aa8.89□□□□□ -0.99
SPCS3-204ENST00000513139 RAB4AP20338 218 aa8.89□□□□□ -0.99
SPCS3-204ENST00000513139 HBBP68871 147 aa8.89□□□□□ -0.99
SPCS3-204ENST00000513139 SDIM1Q6ZPB5 146 aa8.89□□□□□ -0.99
SPCS3-204ENST00000513139 CDIP1Q9H305 208 aa8.89□□□□□ -0.99
SPCS3-204ENST00000513139 TMEM242Q9NWH2 141 aa8.89□□□□□ -0.99
SPCS3-204ENST00000513139 A0A1B0GW15 77 aa8.88□□□□□ -0.99
SPCS3-204ENST00000513139 PRSS1P07477 247 aa8.88□□□□□ -0.99
SPCS3-204ENST00000513139 CIRBPQ14011 172 aaKnown RBP8.88□□□□□ -0.99
SPCS3-204ENST00000513139 ENHOQ6UWT2 76 aa8.88□□□□□ -0.99
SPCS3-204ENST00000513139 BTF3L4Q96K17 158 aa8.88□□□□□ -0.99
SPCS3-204ENST00000513139 TRBV7-3A0A075B6L6 115 aa8.87□□□□□ -0.99
SPCS3-204ENST00000513139 SMKR1H3BMG3 65 aa8.87□□□□□ -0.99
SPCS3-204ENST00000513139 PANO1I0J062 215 aa8.87□□□□□ -0.99
SPCS3-204ENST00000513139 UBE2D3P61077 147 aa8.87□□□□□ -0.99
SPCS3-204ENST00000513139 UBE2D2P62837 147 aa8.87□□□□□ -0.99
SPCS3-204ENST00000513139 RPL36AP83881 106 aaKnown RBP8.87□□□□□ -0.99
SPCS3-204ENST00000513139 FAM104BQ5XKR9 115 aa8.87□□□□□ -0.99
SPCS3-204ENST00000513139 RASL11AQ6T310 242 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms