RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 KHDC1LQ5JSQ8 128 aa6.71□□□□□ -1.34
CPNE4-210ENST00000512332 CHCHD7Q9BUK0 85 aa6.71□□□□□ -1.34
CPNE4-210ENST00000512332 IGHV3-73A0A0B4J1V6 119 aa6.7□□□□□ -1.34
CPNE4-210ENST00000512332 CFC1BP0CG36 223 aa6.7□□□□□ -1.34
CPNE4-210ENST00000512332 CFC1P0CG37 223 aa6.7□□□□□ -1.34
CPNE4-210ENST00000512332 Q6ZSN1 163 aa6.7□□□□□ -1.34
CPNE4-210ENST00000512332 C10orf126Q8N4M7 172 aa6.7□□□□□ -1.34
CPNE4-210ENST00000512332 TEX15Q9BXT5 2789 aa6.7□□□□□ -1.34
CPNE4-210ENST00000512332 TINCRA0A1B0GVN0 87 aa6.7□□□□□ -1.34
CPNE4-210ENST00000512332 UBE2D4Q9Y2X8 147 aa6.7□□□□□ -1.34
CPNE4-210ENST00000512332 NACAE9PAV3 2078 aa6.7□□□□□ -1.34
CPNE4-210ENST00000512332 TRBV20-1A0A075B6N2 111 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 TMEM238C9JI98 176 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 PRM2P04554 102 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 ODF3L2Q3SX64 289 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 PRO1854Q9UHT4 67 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 MYO9AB2RTY4 2548 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 CENPEQ02224 2701 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 DNAJC9-AS1A6NH13 148 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 APOMO95445 188 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 IGHV3-30-3P0DP02 117 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 COTL1Q14019 142 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 C21orf62-AS1Q17RA5 79 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 IL17DQ8TAD2 202 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 TIMM21Q9BVV7 248 aa6.69□□□□□ -1.34
CPNE4-210ENST00000512332 ABCA12Q86UK0 2595 aa6.68□□□□□ -1.34
CPNE4-210ENST00000512332 A0A0B4J2C4 111 aa6.68□□□□□ -1.34
CPNE4-210ENST00000512332 IGHV1-58A0A0C4DH39 117 aa6.68□□□□□ -1.34
CPNE4-210ENST00000512332 CMC4P56277 68 aaPredicted RBP6.68□□□□□ -1.34
CPNE4-210ENST00000512332 ETDBQ3ZM63 59 aa6.68□□□□□ -1.34
CPNE4-210ENST00000512332 ATP6V0E2Q8NHE4 81 aa6.68□□□□□ -1.34
CPNE4-210ENST00000512332 Q9UF83 564 aa6.68□□□□□ -1.34
CPNE4-210ENST00000512332 CCL24O00175 119 aa6.68□□□□□ -1.34
CPNE4-210ENST00000512332 STHQ8IWL8 128 aa6.68□□□□□ -1.34
CPNE4-210ENST00000512332 C1orf158Q8N1D5 194 aa6.68□□□□□ -1.34
CPNE4-210ENST00000512332 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.67□□□□□ -1.34
CPNE4-210ENST00000512332 LOC107984156A0A0G2JMH3 177 aa6.67□□□□□ -1.34
CPNE4-210ENST00000512332 A0A0J9YXY3 114 aa6.67□□□□□ -1.34
CPNE4-210ENST00000512332 A4D1N5 150 aa6.67□□□□□ -1.34
CPNE4-210ENST00000512332 ARL17AQ8IVW1 177 aa6.67□□□□□ -1.34
CPNE4-210ENST00000512332 TRBV10-1A0A0K0K1A3 114 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 TIRAPP58753 221 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 CEMP1Q6PRD7 247 aaPredicted RBP6.66□□□□□ -1.34
CPNE4-210ENST00000512332 SH2D6Q7Z4S9 175 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 WFDC11Q8NEX6 87 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 VSIG2Q96IQ7 327 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 FAM110AQ9BQ89 295 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 XCL2Q9UBD3 114 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 IGLV5-45A0A087WSX0 123 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 AZU1P20160 251 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 MUSTN1Q8IVN3 82 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 SBSPONQ8IVN8 264 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 TMEM263Q8WUH6 116 aaKnown RBP6.66□□□□□ -1.34
CPNE4-210ENST00000512332 RNF183Q96D59 192 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 LITAFQ99732 161 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 C16orf95Q9H693 158 aa6.66□□□□□ -1.34
CPNE4-210ENST00000512332 IGHV3-33P01772 117 aa6.65□□□□□ -1.34
CPNE4-210ENST00000512332 PSMB2P49721 201 aa6.65□□□□□ -1.34
CPNE4-210ENST00000512332 SMCPP49901 116 aaPredicted RBP6.65□□□□□ -1.34
CPNE4-210ENST00000512332 ESM1Q9NQ30 184 aa6.65□□□□□ -1.34
CPNE4-210ENST00000512332 CSDC2Q9Y534 153 aaKnown RBP6.65□□□□□ -1.34
CPNE4-210ENST00000512332 TSSC4Q9Y5U2 329 aaPredicted RBP6.65□□□□□ -1.34
CPNE4-210ENST00000512332 IGHV3-64A0A075B6Q5 118 aa6.65□□□□□ -1.35
CPNE4-210ENST00000512332 TCL1BO95988 128 aa6.65□□□□□ -1.35
CPNE4-210ENST00000512332 FAM19A3Q7Z5A8 133 aa6.65□□□□□ -1.35
CPNE4-210ENST00000512332 SPATA25Q9BR10 227 aa6.65□□□□□ -1.35
CPNE4-210ENST00000512332 C1QTNF4Q9BXJ3 329 aa6.65□□□□□ -1.35
CPNE4-210ENST00000512332 SPANXDQ9BXN6 97 aa6.65□□□□□ -1.35
CPNE4-210ENST00000512332 SPANXCQ9NY87 97 aa6.65□□□□□ -1.35
CPNE4-210ENST00000512332 NDUFA12Q9UI09 145 aa6.65□□□□□ -1.35
CPNE4-210ENST00000512332 APCP25054 2843 aa6.64□□□□□ -1.35
CPNE4-210ENST00000512332 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.64□□□□□ -1.35
CPNE4-210ENST00000512332 IGKV2-29A2NJV5 120 aaPredicted RBP6.64□□□□□ -1.35
CPNE4-210ENST00000512332 M0QXV9 152 aa6.64□□□□□ -1.35
CPNE4-210ENST00000512332 TIMM17BO60830 172 aa6.64□□□□□ -1.35
CPNE4-210ENST00000512332 ZFAND6Q6FIF0 208 aa6.64□□□□□ -1.35
CPNE4-210ENST00000512332 Q6ZUT4 128 aa6.64□□□□□ -1.35
CPNE4-210ENST00000512332 ERG28Q9UKR5 140 aa6.64□□□□□ -1.35
CPNE4-210ENST00000512332 TRAV8-3A0A0A6YYJ7 113 aa6.64□□□□□ -1.35
CPNE4-210ENST00000512332 GAGE12HA6NDE8 117 aa6.64□□□□□ -1.35
CPNE4-210ENST00000512332 EIF4EBP3O60516 100 aaPredicted RBP6.64□□□□□ -1.35
CPNE4-210ENST00000512332 RNASE1P07998 156 aaKnown RBP6.64□□□□□ -1.35
CPNE4-210ENST00000512332 FOXI1Q12951 378 aa6.64□□□□□ -1.35
CPNE4-210ENST00000512332 DAZ2Q13117 558 aaKnown RBP6.64□□□□□ -1.35
CPNE4-210ENST00000512332 DAZ4Q86SG3 579 aaKnown RBP6.64□□□□□ -1.35
CPNE4-210ENST00000512332 GEMIN7Q9H840 131 aaKnown RBP6.64□□□□□ -1.35
CPNE4-210ENST00000512332 DAZ3Q9NR90 486 aaKnown RBP6.64□□□□□ -1.35
CPNE4-210ENST00000512332 TRAV4A0A0B4J268 109 aa6.63□□□□□ -1.35
CPNE4-210ENST00000512332 CIDEAO60543 219 aa6.63□□□□□ -1.35
CPNE4-210ENST00000512332 RPL36AP83881 106 aaKnown RBP6.63□□□□□ -1.35
CPNE4-210ENST00000512332 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
CPNE4-210ENST00000512332 LINC01006Q8NI28 216 aa6.63□□□□□ -1.35
CPNE4-210ENST00000512332 RPL36ALQ969Q0 106 aaKnown RBP6.63□□□□□ -1.35
CPNE4-210ENST00000512332 SIGMAR1Q99720 223 aa6.63□□□□□ -1.35
CPNE4-210ENST00000512332 CITED2Q99967 270 aaPredicted RBP6.63□□□□□ -1.35
CPNE4-210ENST00000512332 ITPR3Q14573 2671 aa6.63□□□□□ -1.35
CPNE4-210ENST00000512332 TRGV1A0A0A0MS02 117 aa6.62□□□□□ -1.35
CPNE4-210ENST00000512332 IGHV3-38A0A0C4DH36 116 aa6.62□□□□□ -1.35
CPNE4-210ENST00000512332 SCGB1C2P0DMR2 95 aa6.62□□□□□ -1.35
CPNE4-210ENST00000512332 SCGB1A1P11684 91 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms