RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 Q6ZQT7 251 aa9.76□□□□□ -0.85
PCDHA4-202ENST00000512229 C5orf38Q86SI9 138 aa9.76□□□□□ -0.85
PCDHA4-202ENST00000512229 PSCAO43653 123 aa9.76□□□□□ -0.85
PCDHA4-202ENST00000512229 RNF185Q96GF1 192 aa9.76□□□□□ -0.85
PCDHA4-202ENST00000512229 C11orf86A6NJI1 115 aa9.76□□□□□ -0.85
PCDHA4-202ENST00000512229 NXPH4O95158 308 aa9.76□□□□□ -0.85
PCDHA4-202ENST00000512229 ZMAT4Q9H898 229 aa9.76□□□□□ -0.85
PCDHA4-202ENST00000512229 Q9H8V8 135 aa9.76□□□□□ -0.85
PCDHA4-202ENST00000512229 TRBV20-1A0A075B6N2 111 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 TEX48A0A1B0GUV7 120 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 C12orf74Q32Q52 190 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 C2orf82Q6UX34 121 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 FRYQ5TBA9 3013 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 C9JAW5 83 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 K7ERJ3 54 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 P0DMU3 169 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 FAM231AP0DMU4 169 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 FAM231CP0DMU5 169 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 SCGB1A1P11684 91 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 RNASE3P12724 160 aaKnown RBP9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 TTC32Q5I0X7 151 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 TRAV4A0A0B4J268 109 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 BOD1L2Q8IYS8 172 aa9.75□□□□□ -0.85
PCDHA4-202ENST00000512229 ZNF580Q9UK33 172 aa9.74□□□□□ -0.85
PCDHA4-202ENST00000512229 PRO0255Q9UI72 69 aa9.74□□□□□ -0.85
PCDHA4-202ENST00000512229 TRAV8-3A0A0A6YYJ7 113 aa9.74□□□□□ -0.85
PCDHA4-202ENST00000512229 E9PLD3 99 aa9.74□□□□□ -0.85
PCDHA4-202ENST00000512229 PCP4P48539 62 aa9.74□□□□□ -0.85
PCDHA4-202ENST00000512229 AMTNQ6UX39 209 aa9.74□□□□□ -0.85
PCDHA4-202ENST00000512229 OPRPNQ99935 248 aaPredicted RBP9.74□□□□□ -0.85
PCDHA4-202ENST00000512229 Q6ZVH6 145 aa9.74□□□□□ -0.85
PCDHA4-202ENST00000512229 SLC25A29Q8N8R3 303 aa9.74□□□□□ -0.85
PCDHA4-202ENST00000512229 U3KQK5 164 aa9.74□□□□□ -0.85
PCDHA4-202ENST00000512229 NPSP0C0P6 89 aa9.73□□□□□ -0.85
PCDHA4-202ENST00000512229 SH2D6Q7Z4S9 175 aa9.73□□□□□ -0.85
PCDHA4-202ENST00000512229 UBE2WQ96B02 151 aa9.73□□□□□ -0.85
PCDHA4-202ENST00000512229 A0A1W2PPM0 123 aa9.73□□□□□ -0.85
PCDHA4-202ENST00000512229 SMR3AQ99954 134 aa9.73□□□□□ -0.85
PCDHA4-202ENST00000512229 ICOSQ9Y6W8 199 aa9.73□□□□□ -0.85
PCDHA4-202ENST00000512229 EDN2P20800 178 aa9.72□□□□□ -0.85
PCDHA4-202ENST00000512229 CNFNQ9BYD5 112 aa9.72□□□□□ -0.85
PCDHA4-202ENST00000512229 M0QY20 66 aa9.72□□□□□ -0.85
PCDHA4-202ENST00000512229 HIGD1BQ9P298 99 aa9.72□□□□□ -0.85
PCDHA4-202ENST00000512229 CEMP1Q6PRD7 247 aaPredicted RBP9.71□□□□□ -0.85
PCDHA4-202ENST00000512229 NBEAQ8NFP9 2946 aa9.71□□□□□ -0.85
PCDHA4-202ENST00000512229 IGHV4-4A0A075B6R2 117 aa9.71□□□□□ -0.86
PCDHA4-202ENST00000512229 PRSS47A8MTI9 375 aa9.71□□□□□ -0.86
PCDHA4-202ENST00000512229 ETDBQ3ZM63 59 aa9.71□□□□□ -0.86
PCDHA4-202ENST00000512229 MTURNQ8N3F0 131 aa9.71□□□□□ -0.86
PCDHA4-202ENST00000512229 F8P00451 2351 aa9.7□□□□□ -0.86
PCDHA4-202ENST00000512229 IGLV10-54A0A075B6I4 117 aa9.7□□□□□ -0.86
PCDHA4-202ENST00000512229 K7EP34 96 aa9.7□□□□□ -0.86
PCDHA4-202ENST00000512229 HERV-K104P63124 156 aa9.7□□□□□ -0.86
PCDHA4-202ENST00000512229 OVOL2Q9BRP0 275 aa9.7□□□□□ -0.86
PCDHA4-202ENST00000512229 SMIM9A6NGZ8 99 aa9.7□□□□□ -0.86
PCDHA4-202ENST00000512229 TSPAN13O95857 204 aa9.7□□□□□ -0.86
PCDHA4-202ENST00000512229 VSIG2Q96IQ7 327 aa9.69□□□□□ -0.86
PCDHA4-202ENST00000512229 H3BMG7 143 aa9.69□□□□□ -0.86
PCDHA4-202ENST00000512229 FXYD2P54710 66 aa9.69□□□□□ -0.86
PCDHA4-202ENST00000512229 AGRNO00468 2067 aa9.69□□□□□ -0.86
PCDHA4-202ENST00000512229 FAM222AQ5U5X8 452 aa9.69□□□□□ -0.86
PCDHA4-202ENST00000512229 CFAP126Q5VTH2 177 aa9.69□□□□□ -0.86
PCDHA4-202ENST00000512229 NRACQ8N912 160 aa9.69□□□□□ -0.86
PCDHA4-202ENST00000512229 TRBV27A0A0K0K1C4 114 aa9.68□□□□□ -0.86
PCDHA4-202ENST00000512229 CFC1BP0CG36 223 aa9.68□□□□□ -0.86
PCDHA4-202ENST00000512229 CFC1P0CG37 223 aa9.68□□□□□ -0.86
PCDHA4-202ENST00000512229 COX8CQ7Z4L0 72 aa9.68□□□□□ -0.86
PCDHA4-202ENST00000512229 TNRC18O15417 2968 aaPredicted RBP9.68□□□□□ -0.86
PCDHA4-202ENST00000512229 IFITM1P13164 125 aa9.68□□□□□ -0.86
PCDHA4-202ENST00000512229 LINC00482Q8N8I6 264 aa9.68□□□□□ -0.86
PCDHA4-202ENST00000512229 TRAV8-4A0A0B4J246 113 aa9.68□□□□□ -0.86
PCDHA4-202ENST00000512229 K7EP13 123 aa9.68□□□□□ -0.86
PCDHA4-202ENST00000512229 GAS8-AS1O95177 125 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 Q6ZUT4 128 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 WFDC10AQ9H1F0 79 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 IGKV2D-24A0A075B6R9 120 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 TRAV13-2A0A0B4J235 113 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 TRBV6-5A0A0K0K1A5 114 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 A4D1N5 150 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 PRM2P04554 102 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 PROK1P58294 105 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 SIGMAR1Q99720 223 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 RMI2Q96E14 147 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 C9orf85Q96MD7 179 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 C1orf43Q9BWL3 253 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 F8W1H4 67 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 COX7A2LO14548 114 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 CRYGDP07320 174 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 LINC00310P59036 64 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 NEXN-AS1Q8NBZ9 246 aa9.67□□□□□ -0.86
PCDHA4-202ENST00000512229 ODF3L2Q3SX64 289 aa9.66□□□□□ -0.86
PCDHA4-202ENST00000512229 NDUFA7O95182 113 aa9.66□□□□□ -0.86
PCDHA4-202ENST00000512229 MUSTN1Q8IVN3 82 aa9.66□□□□□ -0.86
PCDHA4-202ENST00000512229 C10orf126Q8N4M7 172 aa9.66□□□□□ -0.86
PCDHA4-202ENST00000512229 AKAP13Q12802 2813 aa9.66□□□□□ -0.86
PCDHA4-202ENST00000512229 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
PCDHA4-202ENST00000512229 Q9HAA7 133 aa9.66□□□□□ -0.86
PCDHA4-202ENST00000512229 LAMTOR3Q9UHA4 124 aa9.66□□□□□ -0.86
PCDHA4-202ENST00000512229 IGHV3-30-3P0DP02 117 aa9.65□□□□□ -0.86
PCDHA4-202ENST00000512229 OCIAD2Q56VL3 154 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms