RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 HCFC1P51610 2035 aa8.37□□□□□ -1.07
CPNE4-209ENST00000512055 I3L2K1 104 aa8.37□□□□□ -1.07
CPNE4-209ENST00000512055 NDUFC1O43677 76 aa8.37□□□□□ -1.07
CPNE4-209ENST00000512055 COX7A2LO14548 114 aa8.37□□□□□ -1.07
CPNE4-209ENST00000512055 COL4A2P08572 1712 aa8.37□□□□□ -1.07
CPNE4-209ENST00000512055 ARHGAP32A7KAX9 2087 aa8.37□□□□□ -1.07
CPNE4-209ENST00000512055 IGHV4-61A0A0C4DH41 118 aa8.37□□□□□ -1.07
CPNE4-209ENST00000512055 H3BQ85 93 aa8.36□□□□□ -1.07
CPNE4-209ENST00000512055 NAV2Q8IVL1 2488 aa8.36□□□□□ -1.07
CPNE4-209ENST00000512055 SERP1Q9Y6X1 66 aa8.36□□□□□ -1.07
CPNE4-209ENST00000512055 IGKV2D-24A0A075B6R9 120 aa8.36□□□□□ -1.07
CPNE4-209ENST00000512055 PDE6GP18545 87 aa8.36□□□□□ -1.07
CPNE4-209ENST00000512055 NRGNQ92686 78 aa8.36□□□□□ -1.07
CPNE4-209ENST00000512055 ZMAT4Q9H898 229 aa8.36□□□□□ -1.07
CPNE4-209ENST00000512055 SONP18583 2426 aaKnown RBP8.36□□□□□ -1.07
CPNE4-209ENST00000512055 NAV3Q8IVL0 2385 aa8.36□□□□□ -1.07
CPNE4-209ENST00000512055 IGHV7-81A0A0B4J1V7 117 aa8.36□□□□□ -1.07
CPNE4-209ENST00000512055 COX7CP15954 63 aa8.36□□□□□ -1.07
CPNE4-209ENST00000512055 ZFAND3Q9H8U3 227 aa8.36□□□□□ -1.07
CPNE4-209ENST00000512055 TRIOO75962 3097 aa8.35□□□□□ -1.07
CPNE4-209ENST00000512055 FRMD6-AS1P0C7T7 363 aa8.35□□□□□ -1.07
CPNE4-209ENST00000512055 GP9P14770 177 aa8.35□□□□□ -1.07
CPNE4-209ENST00000512055 BLCAPP62952 87 aa8.35□□□□□ -1.07
CPNE4-209ENST00000512055 DEFB112Q30KQ8 113 aa8.35□□□□□ -1.07
CPNE4-209ENST00000512055 IGF2BP2-AS1Q96M15 143 aa8.35□□□□□ -1.07
CPNE4-209ENST00000512055 SPRY2O43597 315 aa8.35□□□□□ -1.07
CPNE4-209ENST00000512055 Q6Q795 121 aa8.35□□□□□ -1.07
CPNE4-209ENST00000512055 DAZ2Q13117 558 aaKnown RBP8.35□□□□□ -1.07
CPNE4-209ENST00000512055 FBXL19-AS1Q494R0 122 aa8.35□□□□□ -1.07
CPNE4-209ENST00000512055 DAZ4Q86SG3 579 aaKnown RBP8.35□□□□□ -1.07
CPNE4-209ENST00000512055 ZNF503Q96F45 646 aa8.35□□□□□ -1.07
CPNE4-209ENST00000512055 DAZ3Q9NR90 486 aaKnown RBP8.35□□□□□ -1.07
CPNE4-209ENST00000512055 Q6ZQT7 251 aa8.34□□□□□ -1.07
CPNE4-209ENST00000512055 FAM19A5Q7Z5A7 132 aaPredicted RBP8.34□□□□□ -1.07
CPNE4-209ENST00000512055 NDUFA11Q86Y39 141 aa8.34□□□□□ -1.07
CPNE4-209ENST00000512055 LINC00574Q9H8X3 128 aa8.34□□□□□ -1.07
CPNE4-209ENST00000512055 WFDC10BQ8IUB3 73 aa8.34□□□□□ -1.07
CPNE4-209ENST00000512055 CAMK2N2Q96S95 79 aa8.34□□□□□ -1.07
CPNE4-209ENST00000512055 IGHV4-38-2P0DP08 117 aa8.34□□□□□ -1.07
CPNE4-209ENST00000512055 IGLV10-54A0A075B6I4 117 aa8.34□□□□□ -1.07
CPNE4-209ENST00000512055 FAM19A3Q7Z5A8 133 aa8.33□□□□□ -1.08
CPNE4-209ENST00000512055 NPBQ8NG41 125 aa8.33□□□□□ -1.08
CPNE4-209ENST00000512055 MYO9AB2RTY4 2548 aa8.33□□□□□ -1.08
CPNE4-209ENST00000512055 IGLV11-55A0A075B6I3 123 aa8.33□□□□□ -1.08
CPNE4-209ENST00000512055 RMI2Q96E14 147 aa8.33□□□□□ -1.08
CPNE4-209ENST00000512055 TIRAPP58753 221 aa8.33□□□□□ -1.08
CPNE4-209ENST00000512055 RPL39LQ96EH5 51 aaKnown RBP8.33□□□□□ -1.08
CPNE4-209ENST00000512055 DSCAMO60469 2012 aa8.32□□□□□ -1.08
CPNE4-209ENST00000512055 IGHV7-4-1A0A0J9YVY3 117 aa8.32□□□□□ -1.08
CPNE4-209ENST00000512055 Q8N9L7 120 aa8.32□□□□□ -1.08
CPNE4-209ENST00000512055 Q8N9W7 124 aa8.32□□□□□ -1.08
CPNE4-209ENST00000512055 DIRC1Q969H9 104 aa8.32□□□□□ -1.08
CPNE4-209ENST00000512055 CTSGP08311 255 aa8.32□□□□□ -1.08
CPNE4-209ENST00000512055 ATP5EP2Q5VTU8 51 aa8.32□□□□□ -1.08
CPNE4-209ENST00000512055 XIRP2A4UGR9 3374 aa8.32□□□□□ -1.08
CPNE4-209ENST00000512055 IGKV1D-37A0A075B6S9 117 aa8.32□□□□□ -1.08
CPNE4-209ENST00000512055 PSPHP1O15172 72 aa8.31□□□□□ -1.08
CPNE4-209ENST00000512055 GNRH2O43555 120 aa8.31□□□□□ -1.08
CPNE4-209ENST00000512055 PIK3CD-AS1Q5SR53 167 aa8.31□□□□□ -1.08
CPNE4-209ENST00000512055 Q96MF0 132 aa8.31□□□□□ -1.08
CPNE4-209ENST00000512055 GATA3P23771 443 aa8.31□□□□□ -1.08
CPNE4-209ENST00000512055 E9PLD3 99 aa8.31□□□□□ -1.08
CPNE4-209ENST00000512055 MIR7-3HGQ8N6C7 128 aa8.3□□□□□ -1.08
CPNE4-209ENST00000512055 A0A0J9YY99 117 aa8.3□□□□□ -1.08
CPNE4-209ENST00000512055 C19orf84I3L1E1 186 aa8.3□□□□□ -1.08
CPNE4-209ENST00000512055 NDUFA4O00483 81 aa8.3□□□□□ -1.08
CPNE4-209ENST00000512055 MYO18BQ8IUG5 2567 aa8.29□□□□□ -1.08
CPNE4-209ENST00000512055 AGPAT4-IT1Q9H0P7 198 aa8.29□□□□□ -1.08
CPNE4-209ENST00000512055 CSDC2Q9Y534 153 aaKnown RBP8.29□□□□□ -1.08
CPNE4-209ENST00000512055 TLN2Q9Y4G6 2542 aa8.29□□□□□ -1.08
CPNE4-209ENST00000512055 XGP55808 180 aa8.29□□□□□ -1.08
CPNE4-209ENST00000512055 RPL39P62891 51 aaKnown RBP8.29□□□□□ -1.08
CPNE4-209ENST00000512055 MRPL53Q96EL3 112 aaKnown RBP8.29□□□□□ -1.08
CPNE4-209ENST00000512055 TM2D2Q9BX73 214 aa8.29□□□□□ -1.08
CPNE4-209ENST00000512055 SPAG11BQ08648 103 aa8.28□□□□□ -1.08
CPNE4-209ENST00000512055 CDSNQ15517 529 aa8.28□□□□□ -1.08
CPNE4-209ENST00000512055 HIVEP3Q5T1R4 2406 aa8.28□□□□□ -1.08
CPNE4-209ENST00000512055 IGHV4-30-4P0DP06 118 aa8.28□□□□□ -1.08
CPNE4-209ENST00000512055 IGHV4-31P0DP07 118 aa8.28□□□□□ -1.08
CPNE4-209ENST00000512055 C4orf48Q5BLP8 95 aa8.28□□□□□ -1.08
CPNE4-209ENST00000512055 SHISA2Q6UWI4 295 aa8.28□□□□□ -1.08
CPNE4-209ENST00000512055 MRPS12O15235 138 aaKnown RBP8.28□□□□□ -1.08
CPNE4-209ENST00000512055 SIRPDQ9H106 197 aa8.28□□□□□ -1.08
CPNE4-209ENST00000512055 C11orf86A6NJI1 115 aa8.28□□□□□ -1.08
CPNE4-209ENST00000512055 MSRB1Q9NZV6 116 aa8.28□□□□□ -1.08
CPNE4-209ENST00000512055 USP9YO00507 2555 aaPredicted RBP8.28□□□□□ -1.08
CPNE4-209ENST00000512055 ABCA2Q9BZC7 2435 aa8.27□□□□□ -1.09
CPNE4-209ENST00000512055 FAM222AQ5U5X8 452 aa8.27□□□□□ -1.09
CPNE4-209ENST00000512055 GTSF1Q8WW33 167 aa8.27□□□□□ -1.09
CPNE4-209ENST00000512055 A0A096LNI7 61 aa8.27□□□□□ -1.09
CPNE4-209ENST00000512055 PIFOQ8TCI5 191 aa8.27□□□□□ -1.09
CPNE4-209ENST00000512055 SLPIP03973 132 aa8.27□□□□□ -1.09
CPNE4-209ENST00000512055 LINC01548A6NM66 108 aa8.26□□□□□ -1.09
CPNE4-209ENST00000512055 POM121L12Q8N7R1 296 aa8.26□□□□□ -1.09
CPNE4-209ENST00000512055 C5orf56Q8N8D9 126 aa8.26□□□□□ -1.09
CPNE4-209ENST00000512055 SZT2Q5T011 3432 aa8.26□□□□□ -1.09
CPNE4-209ENST00000512055 LOC107984640A0A0U1RRK4 108 aa8.26□□□□□ -1.09
CPNE4-209ENST00000512055 IMUPQ9GZP8 106 aa8.26□□□□□ -1.09
CPNE4-209ENST00000512055 PRAC2D3DTV9 90 aa8.26□□□□□ -1.09
CPNE4-209ENST00000512055 COX7BP24311 80 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms