RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 HILS1P60008 231 aa5.41□□□□□ -1.54
CPNE4-208ENST00000511604 APRG1Q8IVJ8 170 aa5.41□□□□□ -1.54
CPNE4-208ENST00000511604 IGHV1-69P01742 117 aa5.4□□□□□ -1.54
CPNE4-208ENST00000511604 CCKP06307 115 aa5.4□□□□□ -1.54
CPNE4-208ENST00000511604 RPL28P46779 137 aaKnown RBP5.4□□□□□ -1.54
CPNE4-208ENST00000511604 DEFB1P60022 68 aa5.4□□□□□ -1.54
CPNE4-208ENST00000511604 PRR9Q5T870 116 aa5.4□□□□□ -1.54
CPNE4-208ENST00000511604 Q8N2B8 174 aa5.4□□□□□ -1.54
CPNE4-208ENST00000511604 VSIG2Q96IQ7 327 aa5.4□□□□□ -1.54
CPNE4-208ENST00000511604 NDUFA12Q9UI09 145 aa5.4□□□□□ -1.54
CPNE4-208ENST00000511604 GVINP1Q7Z2Y8 2422 aa5.4□□□□□ -1.54
CPNE4-208ENST00000511604 PKDREJQ9NTG1 2253 aa5.4□□□□□ -1.54
CPNE4-208ENST00000511604 POLEQ07864 2286 aa5.4□□□□□ -1.55
CPNE4-208ENST00000511604 TRAV23DV6A0A075B6W5 121 aa5.4□□□□□ -1.55
CPNE4-208ENST00000511604 A0A0J9YXV3 536 aa5.4□□□□□ -1.55
CPNE4-208ENST00000511604 POLR2KP53803 58 aaKnown RBP5.4□□□□□ -1.55
CPNE4-208ENST00000511604 ZFAND3Q9H8U3 227 aa5.4□□□□□ -1.55
CPNE4-208ENST00000511604 ATRXP46100 2492 aa5.4□□□□□ -1.55
CPNE4-208ENST00000511604 WNK2Q9Y3S1 2297 aa5.4□□□□□ -1.55
CPNE4-208ENST00000511604 FAM208BQ5VWN6 2430 aa5.39□□□□□ -1.55
CPNE4-208ENST00000511604 TPRP12270 2363 aaKnown RBP5.39□□□□□ -1.55
CPNE4-208ENST00000511604 TRBV7-6A0A0J9YX20 115 aa5.39□□□□□ -1.55
CPNE4-208ENST00000511604 A0A1W2PNU3 283 aaPredicted RBP5.39□□□□□ -1.55
CPNE4-208ENST00000511604 TIMM17BO60830 172 aa5.39□□□□□ -1.55
CPNE4-208ENST00000511604 IGFL2Q6UWQ7 119 aa5.39□□□□□ -1.55
CPNE4-208ENST00000511604 Q96MF0 132 aa5.39□□□□□ -1.55
CPNE4-208ENST00000511604 C14orf132Q9NPU4 83 aa5.39□□□□□ -1.55
CPNE4-208ENST00000511604 RP1L1Q8IWN7 2480 aaPredicted RBP5.39□□□□□ -1.55
CPNE4-208ENST00000511604 CACNA1GO43497 2377 aa5.39□□□□□ -1.55
CPNE4-208ENST00000511604 IGHV3-49A0A0A0MS15 119 aa5.39□□□□□ -1.55
CPNE4-208ENST00000511604 VCYO14598 125 aa5.39□□□□□ -1.55
CPNE4-208ENST00000511604 TRBV12-3P01733 135 aa5.39□□□□□ -1.55
CPNE4-208ENST00000511604 RBM3P98179 157 aaKnown RBP5.39□□□□□ -1.55
CPNE4-208ENST00000511604 ACACBO00763 2458 aa5.39□□□□□ -1.55
CPNE4-208ENST00000511604 CHD8Q9HCK8 2581 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 TRBV27A0A0K0K1C4 114 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 TMEM89A2RUT3 159 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 NDPQ00604 133 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 KLKP1Q107X0 134 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 FAM218AQ96MZ4 157 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 DCHS2Q6V1P9 2916 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 CUBNO60494 3623 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 IGHV4OR15-8A0A075B7B6 117 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 A0A087WW49 117 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 BUB1B-PAK6H3BSN5 160 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 ZNF561-AS1K7EIQ3 104 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 CD164Q04900 197 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 PHLDA3Q9Y5J5 127 aa5.38□□□□□ -1.55
CPNE4-208ENST00000511604 NCOR2Q9Y618 2525 aa5.37□□□□□ -1.55
CPNE4-208ENST00000511604 C9orf129Q5T035 196 aaKnown RBP5.37□□□□□ -1.55
CPNE4-208ENST00000511604 Q9HAA7 133 aa5.37□□□□□ -1.55
CPNE4-208ENST00000511604 ASH1LQ9NR48 2969 aaKnown RBP5.37□□□□□ -1.55
CPNE4-208ENST00000511604 IGHV1-58A0A0C4DH39 117 aa5.37□□□□□ -1.55
CPNE4-208ENST00000511604 CLPSL1A2RUU4 121 aa5.37□□□□□ -1.55
CPNE4-208ENST00000511604 A8MZ25 164 aa5.37□□□□□ -1.55
CPNE4-208ENST00000511604 S100A4P26447 101 aaKnown RBP5.37□□□□□ -1.55
CPNE4-208ENST00000511604 SNRPD3P62318 126 aaKnown RBP5.37□□□□□ -1.55
CPNE4-208ENST00000511604 CFHR3Q02985 330 aa5.37□□□□□ -1.55
CPNE4-208ENST00000511604 C9orf47Q6ZRZ4 202 aa5.37□□□□□ -1.55
CPNE4-208ENST00000511604 C1orf158Q8N1D5 194 aa5.37□□□□□ -1.55
CPNE4-208ENST00000511604 IGHV1-3A0A0C4DH29 117 aa5.36□□□□□ -1.55
CPNE4-208ENST00000511604 RIF1Q5UIP0 2472 aaKnown RBP5.36□□□□□ -1.55
CPNE4-208ENST00000511604 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.36□□□□□ -1.55
CPNE4-208ENST00000511604 F8WEM9 126 aa5.36□□□□□ -1.55
CPNE4-208ENST00000511604 COX7A1P24310 79 aa5.36□□□□□ -1.55
CPNE4-208ENST00000511604 Q6ZRU5 148 aa5.36□□□□□ -1.55
CPNE4-208ENST00000511604 PRR15Q8IV56 129 aa5.36□□□□□ -1.55
CPNE4-208ENST00000511604 WFDC9Q8NEX5 89 aa5.36□□□□□ -1.55
CPNE4-208ENST00000511604 CCL17Q92583 94 aa5.36□□□□□ -1.55
CPNE4-208ENST00000511604 IGLV3-9A0A075B6K5 115 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 TRAV7A0A075B6U4 112 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 IGHV1-8P0DP01 117 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 LINC00315P59091 139 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 ATP5EP2Q5VTU8 51 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 SEM1Q6ZVN7 128 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 OBSCN-AS1Q96MR7 158 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 BPESC1Q9GZL8 116 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 GNRH2O43555 120 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 MPLKIPQ8TAP9 179 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 RMI2Q96E14 147 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 SNURFQ9Y675 71 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 USP24Q9UPU5 2620 aa5.35□□□□□ -1.55
CPNE4-208ENST00000511604 IGLV4-3A0A075B6K6 122 aa5.34□□□□□ -1.55
CPNE4-208ENST00000511604 SUMO4Q6EEV6 95 aa5.34□□□□□ -1.55
CPNE4-208ENST00000511604 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.34□□□□□ -1.55
CPNE4-208ENST00000511604 LINC00308Q8TCZ7 52 aa5.34□□□□□ -1.55
CPNE4-208ENST00000511604 KIF25-AS1Q9Y6Z4 181 aa5.34□□□□□ -1.55
CPNE4-208ENST00000511604 PCNX1Q96RV3 2341 aa5.34□□□□□ -1.55
CPNE4-208ENST00000511604 CNOT1A5YKK6 2376 aaKnown RBP5.34□□□□□ -1.55
CPNE4-208ENST00000511604 GPR179Q6PRD1 2367 aa5.34□□□□□ -1.55
CPNE4-208ENST00000511604 CTSGP08311 255 aa5.34□□□□□ -1.56
CPNE4-208ENST00000511604 HOXD3P31249 432 aaPredicted RBP5.34□□□□□ -1.56
CPNE4-208ENST00000511604 VMO1Q7Z5L0 202 aa5.34□□□□□ -1.56
CPNE4-208ENST00000511604 CHD6Q8TD26 2715 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 SAA4P35542 130 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 ATP5EP56381 51 aaPredicted RBP5.33□□□□□ -1.56
CPNE4-208ENST00000511604 S100A7L2Q5SY68 101 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 ENHOQ6UWT2 76 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 MOB4Q9Y3A3 225 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 BSNQ9UPA5 3926 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms