RNA–Protein interactions for RNA: ENST00000511424.5

LIMCH1-212, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-212ENST00000511424 COL5A1-AS1Q5SY13 56 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 C1orf194Q5T5A4 169 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 AMTNQ6UX39 209 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 DPPA3Q6W0C5 159 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 S100A7AQ86SG5 101 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 NDUFA11Q86Y39 141 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 C1orf158Q8N1D5 194 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 ZFAND2AQ8N6M9 145 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 C3orf56Q8N813 242 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 ZNF738Q8NE65 137 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 OR4B1Q8NGF8 309 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 OR10D4PQ8NGN7 298 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 METTL26Q96S19 204 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 IMMP2LQ96T52 175 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 HIST1H2BLQ99880 126 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 C20orf144Q9BQM9 153 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 MAP1LC3CQ9BXW4 147 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 LCE3DQ9BYE3 92 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 TMEM14CQ9P0S9 112 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 PSG8Q9UQ74 426 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 TIMM8BQ9Y5J9 83 aaPredicted RBP1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 URGCP-MRPS24S4R325 110 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 ARL2-SNX15V9GYD0 113 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 DNAH7Q8WXX0 4024 aa1.66□□□□□ -2.14
LIMCH1-212ENST00000511424 TRAV30A0A087WSZ9 112 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 A0A0J9YX75 114 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 C20orf202A1L168 122 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 C7orf77A4D0Y5 90 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 LYRM9A8MSI8 78 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 H3BMM0 161 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 K7EIL1 84 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 LGALS9O00182 355 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 NUPR1O60356 82 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 SH2D1AO60880 128 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 MPDU1O75352 247 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 HSBP1O75506 76 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 GCGP01275 180 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 HTN1P15515 57 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 PSMB3P49720 205 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 ZNF138P52744 262 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 CRYBA4P53673 196 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 EIF5AP63241 154 aaKnown RBP1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 MEF2BQ02080 365 aaPredicted RBP1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 RAB31Q13636 194 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 RHEBQ15382 184 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 TMEM183BQ1AE95 376 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 SAMD13Q5VXD3 122 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 Q86TA4 180 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 BAGE2Q86Y30 109 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 BPIFA4PQ86YQ2 179 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 TMEM183AQ8IXX5 376 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 WFDC9Q8NEX5 89 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 OR8A1Q8NGG7 326 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 DYNLRB2Q8TF09 96 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 RNF185Q96GF1 192 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 FAM19A4Q96LR4 140 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 SMIM7Q9BQ49 75 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 VPS25Q9BRG1 176 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 MRPL32Q9BYC8 188 aaKnown RBP1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 SAMD10Q9BYL1 202 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 CST9LQ9H4G1 147 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 DAZ1Q9NQZ3 744 aaKnown RBP1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 OTORQ9NRC9 128 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 VAX2Q9UIW0 290 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 KLF12Q9Y4X4 402 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 V9GYV3 84 aa1.65□□□□□ -2.15
LIMCH1-212ENST00000511424 TENM2Q9NT68 2774 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 IGHV3-73A0A0B4J1V6 119 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 A0A1B0GW15 77 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 A0A1W2PRE2 83 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 C19orf71A6NCJ1 209 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 OR11H12B2RN74 326 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 PANO1I0J062 215 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 K7ERU9 68 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 HIST1H2BKO60814 126 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 ZNF324O75467 553 aaPredicted RBP1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 LTAP01374 205 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 IGHV3-53P01767 116 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 HIST1H2BJP06899 126 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 PFN1P07737 140 aaKnown RBP1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 ARMS2P0C7Q2 107 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 P0DMU3 169 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 FAM231AP0DMU4 169 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 FAM231CP0DMU5 169 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 RPL7P18124 248 aaKnown RBP1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 HIST1H2BOP23527 126 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 HIST1H2BBP33778 126 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 GALR1P47211 349 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 UBE2AP49459 152 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 HIST1H2BDP58876 126 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 HIST1H2BCP62807 126 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 PAFAH1B2P68402 229 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 HIST2H2BEQ16778 126 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 IQCJQ1A5X6 159 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 COX19Q49B96 90 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 EIF5AL1Q6IS14 154 aaKnown RBP1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 MRPL54Q6P161 138 aaKnown RBP1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 ZNF493Q6ZR52 646 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms