RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 IGKV1D-13A0A0B4J2D9 117 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 A0A0J9YX75 114 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 TMEM223A0PJW6 202 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 SDHAF1A6NFY7 115 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 M0R3E3 92 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 SH2D1AO60880 128 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 MRPL33O75394 65 aaKnown RBP3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 ERC2-IT1O76042 136 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 IGKV1-39P01597 117 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 IGKV1D-39P04432 117 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 IGKV1-13P0DP09 117 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 DEFA4P12838 97 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 COX6B1P14854 86 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 NNATQ16517 81 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 NSUN5P1Q3KNT7 163 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 FAM27BQ5VT28 67 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 C16orf47Q6ZP98 133 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 C7orf65Q6ZTY9 151 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 MIR17HGQ75NE6 70 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 C6orf223Q8N319 242 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 NKAPP1Q8N9T2 125 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 ESM1Q9NQ30 184 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 ADAMTS9Q9P2N4 1935 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 TRIOO75962 3097 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 FAM223BA6NKX1 122 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 F6UB75 175 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 F8WEM9 126 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 NDUFA3O95167 84 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 PPP1R17O96001 155 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 S100A4P26447 101 aaKnown RBP3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 FUSP35637 526 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 KRTAP10-3P60369 221 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 C10orf128Q5T292 105 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 UNQ9165/PRO28630Q6UXU0 137 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 ATP11AUNQ6ZP68 121 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 Q86TA4 180 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 FAM216BQ8N7L0 139 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 SCGB3A1Q96QR1 104 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 LINC00588Q9Y4M8 146 aa3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 HEATR1Q9H583 2144 aaKnown RBP3.31□□□□□ -1.88
HMGB3P13-201ENST00000511263 MUC6Q6W4X9 2439 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 TRAV8-3A0A0A6YYJ7 113 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 A0A1W2PPR1 153 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 C11orf86A6NJI1 115 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 E7EQL1 145 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 SNRNP200O75643 2136 aaKnown RBP3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 FREM3P0C091 2139 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 ARMS2P0C7Q2 107 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 CD28P10747 220 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 SPTBP11277 2137 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 LYPD5Q6UWN5 251 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 ITLN1Q8WWA0 313 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 CCL13Q99616 98 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 SPRR3Q9UBC9 169 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 PHLDA3Q9Y5J5 127 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 MUC3AQ02505 3323 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 EYSQ5T1H1 3165 aa3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 URB1O60287 2271 aaKnown RBP3.3□□□□□ -1.88
HMGB3P13-201ENST00000511263 VCANP13611 3396 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 IGHV1-69DA0A0B4J2H0 117 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 IGHV3-38A0A0C4DH36 116 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 LOC100131303A0A0U1RQF7 123 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 A0A1B0GVY2 172 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 PINLYPA6NC86 204 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 M0R381 172 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 MIFP14174 115 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 C15orf32Q32M92 178 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 CLEC19AQ6UXS0 136 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 CCL17Q92583 94 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 DIRC1Q969H9 104 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 OCR1Q9BZK8 76 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 LINC00474Q9P2X8 69 aa3.29□□□□□ -1.88
HMGB3P13-201ENST00000511263 GVINP1Q7Z2Y8 2422 aa3.28□□□□□ -1.88
HMGB3P13-201ENST00000511263 A8MUN3 132 aa3.28□□□□□ -1.88
HMGB3P13-201ENST00000511263 H7C2G1 150 aa3.28□□□□□ -1.88
HMGB3P13-201ENST00000511263 COX7A2LO14548 114 aa3.28□□□□□ -1.88
HMGB3P13-201ENST00000511263 CD24P25063 80 aa3.28□□□□□ -1.88
HMGB3P13-201ENST00000511263 PIGYQ3MUY2 71 aa3.28□□□□□ -1.88
HMGB3P13-201ENST00000511263 FBXL19-AS1Q494R0 122 aa3.28□□□□□ -1.88
HMGB3P13-201ENST00000511263 C10orf113Q5VZT2 155 aa3.28□□□□□ -1.88
HMGB3P13-201ENST00000511263 AHCTF1Q8WYP5 2266 aa3.28□□□□□ -1.88
HMGB3P13-201ENST00000511263 PIEZO1Q92508 2521 aa3.28□□□□□ -1.88
HMGB3P13-201ENST00000511263 EML6Q6ZMW3 1958 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 POLEQ07864 2286 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 A0A0J9YXY3 114 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 LEPROTO15243 131 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 ZNF80P51504 273 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 MP68P56378 58 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 SPANXN1Q5VSR9 72 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 Q6ZR54 194 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 Q8IYB0 196 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 FXYD5Q96DB9 178 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 FAM167A-AS1Q96KT0 104 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 CNFNQ9BYD5 112 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 CYP4F30PQ9H0H9 118 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 CNOT1A5YKK6 2376 aaKnown RBP3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 DYSFO75923 2080 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 TANC2Q9HCD6 1990 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms