RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 PPDPFQ9H3Y8 114 aa6.44□□□□□ -1.38
HTT-208ENST00000510626 NDUFS5O43920 106 aa6.44□□□□□ -1.38
HTT-208ENST00000510626 Q6JHZ5 121 aa6.44□□□□□ -1.38
HTT-208ENST00000510626 CLEC2BQ92478 149 aa6.44□□□□□ -1.38
HTT-208ENST00000510626 IGHV7-81A0A0B4J1V7 117 aa6.43□□□□□ -1.38
HTT-208ENST00000510626 LST1O00453 97 aa6.43□□□□□ -1.38
HTT-208ENST00000510626 COX7BP24311 80 aa6.43□□□□□ -1.38
HTT-208ENST00000510626 COX8CQ7Z4L0 72 aa6.43□□□□□ -1.38
HTT-208ENST00000510626 PRB3Q04118 309 aaPredicted RBP6.43□□□□□ -1.38
HTT-208ENST00000510626 NRGNQ92686 78 aa6.43□□□□□ -1.38
HTT-208ENST00000510626 F8WDY8 70 aa6.43□□□□□ -1.38
HTT-208ENST00000510626 CAMK2N2Q96S95 79 aa6.43□□□□□ -1.38
HTT-208ENST00000510626 TRBV7-7A0A0K0K1E9 115 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 IGLV2-14P01704 120 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 SMIM9A6NGZ8 99 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 TMEM263Q8WUH6 116 aaKnown RBP6.42□□□□□ -1.38
HTT-208ENST00000510626 C14orf132Q9NPU4 83 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 BRD3OSQ6XYD6 125 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 UBE2D3P61077 147 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 UBE2D2P62837 147 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 PRRC2CQ9Y520 2896 aaKnown RBP6.42□□□□□ -1.38
HTT-208ENST00000510626 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.42□□□□□ -1.38
HTT-208ENST00000510626 IGKV2-29A2NJV5 120 aaPredicted RBP6.42□□□□□ -1.38
HTT-208ENST00000510626 GNLYP22749 145 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 TMEM223A0PJW6 202 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 TRAV7A0A075B6U4 112 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 IGLV2-8P01709 118 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 IGHV3-30P01768 117 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 IGHV3-30-5P0DP03 117 aa6.42□□□□□ -1.38
HTT-208ENST00000510626 GYPEP15421 78 aa6.41□□□□□ -1.38
HTT-208ENST00000510626 C17orf77Q96MU5 243 aa6.41□□□□□ -1.38
HTT-208ENST00000510626 SP5Q6BEB4 398 aaPredicted RBP6.41□□□□□ -1.38
HTT-208ENST00000510626 C2orf91Q6ZV80 131 aa6.41□□□□□ -1.38
HTT-208ENST00000510626 COL4A6Q14031 1691 aa6.41□□□□□ -1.38
HTT-208ENST00000510626 THSD7BQ9C0I4 1608 aa6.41□□□□□ -1.38
HTT-208ENST00000510626 A0A0J9YY99 117 aa6.4□□□□□ -1.38
HTT-208ENST00000510626 CRYGAP11844 174 aa6.4□□□□□ -1.38
HTT-208ENST00000510626 GATA1P15976 413 aaPredicted RBP6.4□□□□□ -1.38
HTT-208ENST00000510626 C4orf3Q8WVX3 66 aa6.4□□□□□ -1.38
HTT-208ENST00000510626 IGKV1OR2-108A0A075B7D4 117 aa6.4□□□□□ -1.39
HTT-208ENST00000510626 IGHV3-38A0A0C4DH36 116 aa6.4□□□□□ -1.39
HTT-208ENST00000510626 IGHV3-33P01772 117 aa6.4□□□□□ -1.39
HTT-208ENST00000510626 WT1P19544 449 aaPredicted RBP6.4□□□□□ -1.39
HTT-208ENST00000510626 C5orf56Q8N8D9 126 aa6.4□□□□□ -1.39
HTT-208ENST00000510626 IGHV4OR15-8A0A075B7B6 117 aa6.4□□□□□ -1.39
HTT-208ENST00000510626 A0A087WW49 117 aa6.4□□□□□ -1.39
HTT-208ENST00000510626 MIR7-3HGQ8N6C7 128 aa6.39□□□□□ -1.39
HTT-208ENST00000510626 INSL3P51460 131 aa6.39□□□□□ -1.39
HTT-208ENST00000510626 CXCL6P80162 114 aa6.39□□□□□ -1.39
HTT-208ENST00000510626 LY6G6EA0A0G2JKS1 128 aa6.39□□□□□ -1.39
HTT-208ENST00000510626 U3KQA8 63 aa6.39□□□□□ -1.39
HTT-208ENST00000510626 RPL39P62891 51 aaKnown RBP6.39□□□□□ -1.39
HTT-208ENST00000510626 TRIAP1O43715 76 aa6.39□□□□□ -1.39
HTT-208ENST00000510626 SPART-AS1P0CW21 52 aa6.39□□□□□ -1.39
HTT-208ENST00000510626 C1orf195Q5TG92 126 aa6.39□□□□□ -1.39
HTT-208ENST00000510626 LRP4O75096 1905 aa6.39□□□□□ -1.39
HTT-208ENST00000510626 DEFB104AQ8WTQ1 72 aa6.39□□□□□ -1.39
HTT-208ENST00000510626 RNASE13Q5GAN3 156 aaKnown RBP6.38□□□□□ -1.39
HTT-208ENST00000510626 USP17L23D6RBM5 183 aa6.38□□□□□ -1.39
HTT-208ENST00000510626 HHLA3Q9XRX5 114 aa6.38□□□□□ -1.39
HTT-208ENST00000510626 MSRB1Q9NZV6 116 aa6.38□□□□□ -1.39
HTT-208ENST00000510626 LINC00308Q8TCZ7 52 aa6.38□□□□□ -1.39
HTT-208ENST00000510626 C20orf197Q8N268 126 aa6.38□□□□□ -1.39
HTT-208ENST00000510626 ZNRD1Q9P1U0 126 aa6.38□□□□□ -1.39
HTT-208ENST00000510626 DHRS4-AS1Q9P1J3 65 aa6.37□□□□□ -1.39
HTT-208ENST00000510626 LIMD2Q9BT23 127 aa6.37□□□□□ -1.39
HTT-208ENST00000510626 C9orf66Q5T8R8 295 aa6.37□□□□□ -1.39
HTT-208ENST00000510626 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.37□□□□□ -1.39
HTT-208ENST00000510626 AJUBAQ96IF1 538 aa6.37□□□□□ -1.39
HTT-208ENST00000510626 TRBV6-5A0A0K0K1A5 114 aa6.37□□□□□ -1.39
HTT-208ENST00000510626 TMEM105Q8N8V8 129 aa6.37□□□□□ -1.39
HTT-208ENST00000510626 GDF5OSQ5U4N7 250 aa6.37□□□□□ -1.39
HTT-208ENST00000510626 IGFL2Q6UWQ7 119 aa6.37□□□□□ -1.39
HTT-208ENST00000510626 ENHOQ6UWT2 76 aa6.37□□□□□ -1.39
HTT-208ENST00000510626 IGKV1D-37A0A075B6S9 117 aa6.37□□□□□ -1.39
HTT-208ENST00000510626 DKK4Q9UBT3 224 aa6.37□□□□□ -1.39
HTT-208ENST00000510626 USP24Q9UPU5 2620 aa6.37□□□□□ -1.39
HTT-208ENST00000510626 LINC01546A6NGU7 62 aa6.36□□□□□ -1.39
HTT-208ENST00000510626 ZNF22P17026 224 aaPredicted RBP6.36□□□□□ -1.39
HTT-208ENST00000510626 COL4A4P53420 1690 aaPredicted RBP6.36□□□□□ -1.39
HTT-208ENST00000510626 TRAV23DV6A0A075B6W5 121 aa6.36□□□□□ -1.39
HTT-208ENST00000510626 ASPHD1Q5U4P2 390 aa6.36□□□□□ -1.39
HTT-208ENST00000510626 FAM215AQ9Y5M1 114 aa6.36□□□□□ -1.39
HTT-208ENST00000510626 C5orf38Q86SI9 138 aa6.36□□□□□ -1.39
HTT-208ENST00000510626 IGKV2D-24A0A075B6R9 120 aa6.36□□□□□ -1.39
HTT-208ENST00000510626 ZNF503-AS2A6NEH8 195 aa6.36□□□□□ -1.39
HTT-208ENST00000510626 SPTSSBQ8NFR3 76 aa6.36□□□□□ -1.39
HTT-208ENST00000510626 CFHR3Q02985 330 aa6.36□□□□□ -1.39
HTT-208ENST00000510626 LTBP2Q14767 1821 aa6.36□□□□□ -1.39
HTT-208ENST00000510626 PMAIP1Q13794 54 aa6.36□□□□□ -1.39
HTT-208ENST00000510626 IGLV1-47P01700 117 aa6.36□□□□□ -1.39
HTT-208ENST00000510626 RUSC1-AS1Q66K80 236 aa6.35□□□□□ -1.39
HTT-208ENST00000510626 B9D2Q9BPU9 175 aa6.35□□□□□ -1.39
HTT-208ENST00000510626 MYCNOSP40205 109 aa6.35□□□□□ -1.39
HTT-208ENST00000510626 PRSS33Q8NF86 280 aa6.35□□□□□ -1.39
HTT-208ENST00000510626 CSDC2Q9Y534 153 aaKnown RBP6.35□□□□□ -1.39
HTT-208ENST00000510626 M0QY20 66 aa6.35□□□□□ -1.39
HTT-208ENST00000510626 CCL18P55774 89 aa6.35□□□□□ -1.39
HTT-208ENST00000510626 ZFAND2AQ8N6M9 145 aa6.35□□□□□ -1.39
HTT-208ENST00000510626 RS1O15537 224 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms