RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 WDR73Q6P4I2 378 aa6.46□□□□□ -1.38
CYSTM1-203ENST00000509589 ALKAL2Q6UX46 152 aa6.46□□□□□ -1.38
CYSTM1-203ENST00000509589 STPG4Q8N801 248 aa6.46□□□□□ -1.38
CYSTM1-203ENST00000509589 SFT2D1Q8WV19 159 aa6.46□□□□□ -1.38
CYSTM1-203ENST00000509589 SSBP4Q9BWG4 385 aaPredicted RBP6.46□□□□□ -1.38
CYSTM1-203ENST00000509589 LPAP08519 4548 aa6.45□□□□□ -1.38
CYSTM1-203ENST00000509589 TRAV8-4A0A0B4J246 113 aa6.45□□□□□ -1.38
CYSTM1-203ENST00000509589 M0QY20 66 aa6.45□□□□□ -1.38
CYSTM1-203ENST00000509589 GAS8-AS1O95177 125 aa6.45□□□□□ -1.38
CYSTM1-203ENST00000509589 P01737 135 aa6.45□□□□□ -1.38
CYSTM1-203ENST00000509589 CXCL1P09341 107 aa6.45□□□□□ -1.38
CYSTM1-203ENST00000509589 PRR3P79522 188 aaKnown RBP6.45□□□□□ -1.38
CYSTM1-203ENST00000509589 LINC00526Q96FQ7 95 aa6.45□□□□□ -1.38
CYSTM1-203ENST00000509589 RNF185Q96GF1 192 aa6.45□□□□□ -1.38
CYSTM1-203ENST00000509589 MLST8Q9BVC4 326 aa6.45□□□□□ -1.38
CYSTM1-203ENST00000509589 UMAD1C9J7I0 102 aa6.44□□□□□ -1.38
CYSTM1-203ENST00000509589 AMTP48728 403 aa6.44□□□□□ -1.38
CYSTM1-203ENST00000509589 FER1L6-AS1Q8NA97 138 aa6.44□□□□□ -1.38
CYSTM1-203ENST00000509589 OR2D3Q8NGH3 330 aa6.44□□□□□ -1.38
CYSTM1-203ENST00000509589 A0A096LNI7 61 aa6.43□□□□□ -1.38
CYSTM1-203ENST00000509589 A0A0J9YXV3 536 aa6.43□□□□□ -1.38
CYSTM1-203ENST00000509589 H7C1H1 209 aa6.43□□□□□ -1.38
CYSTM1-203ENST00000509589 NDUFS6O75380 124 aaKnown RBP6.43□□□□□ -1.38
CYSTM1-203ENST00000509589 RPL35P42766 123 aaKnown RBP6.43□□□□□ -1.38
CYSTM1-203ENST00000509589 RPS10P46783 165 aaKnown RBP6.43□□□□□ -1.38
CYSTM1-203ENST00000509589 KRTAP10-8P60410 259 aa6.43□□□□□ -1.38
CYSTM1-203ENST00000509589 RASL11AQ6T310 242 aa6.43□□□□□ -1.38
CYSTM1-203ENST00000509589 TCEAL7Q9BRU2 100 aa6.43□□□□□ -1.38
CYSTM1-203ENST00000509589 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.42□□□□□ -1.38
CYSTM1-203ENST00000509589 TRAV26-2A0A0B4J265 109 aa6.42□□□□□ -1.38
CYSTM1-203ENST00000509589 IGKV2-29A2NJV5 120 aaPredicted RBP6.42□□□□□ -1.38
CYSTM1-203ENST00000509589 S100A9P06702 114 aaKnown RBP6.42□□□□□ -1.38
CYSTM1-203ENST00000509589 COTL1Q14019 142 aa6.42□□□□□ -1.38
CYSTM1-203ENST00000509589 CENPWQ5EE01 88 aa6.42□□□□□ -1.38
CYSTM1-203ENST00000509589 RNASEKQ6P5S7 137 aaKnown RBP6.42□□□□□ -1.38
CYSTM1-203ENST00000509589 CHCHD10Q8WYQ3 142 aaPredicted RBP6.42□□□□□ -1.38
CYSTM1-203ENST00000509589 A0A1B0GUV1 79 aa6.41□□□□□ -1.38
CYSTM1-203ENST00000509589 RAB19A4D1S5 217 aa6.41□□□□□ -1.38
CYSTM1-203ENST00000509589 IGLC6P0CF74 106 aa6.41□□□□□ -1.38
CYSTM1-203ENST00000509589 BLOC1S1P78537 153 aa6.41□□□□□ -1.38
CYSTM1-203ENST00000509589 CLLU1Q5K131 121 aa6.41□□□□□ -1.38
CYSTM1-203ENST00000509589 AMMECR1LQ6DCA0 310 aa6.41□□□□□ -1.38
CYSTM1-203ENST00000509589 LYZL1Q6UWQ5 148 aa6.41□□□□□ -1.38
CYSTM1-203ENST00000509589 NIT2Q9NQR4 276 aa6.41□□□□□ -1.38
CYSTM1-203ENST00000509589 GNG13Q9P2W3 67 aa6.41□□□□□ -1.38
CYSTM1-203ENST00000509589 TEX46H3BTG2 121 aa6.4□□□□□ -1.38
CYSTM1-203ENST00000509589 H2AFB1P0C5Y9 115 aa6.4□□□□□ -1.38
CYSTM1-203ENST00000509589 NTF3P20783 257 aa6.4□□□□□ -1.38
CYSTM1-203ENST00000509589 CCL20P78556 96 aa6.4□□□□□ -1.38
CYSTM1-203ENST00000509589 NDUFA5Q16718 116 aa6.4□□□□□ -1.38
CYSTM1-203ENST00000509589 CFAP161Q6P656 301 aa6.4□□□□□ -1.38
CYSTM1-203ENST00000509589 MBD3L1Q8WWY6 194 aa6.4□□□□□ -1.38
CYSTM1-203ENST00000509589 RPL39LQ96EH5 51 aaKnown RBP6.4□□□□□ -1.38
CYSTM1-203ENST00000509589 TRGC1P0CF51 173 aa6.39□□□□□ -1.39
CYSTM1-203ENST00000509589 XCL1P47992 114 aa6.39□□□□□ -1.39
CYSTM1-203ENST00000509589 CACNG7P62955 275 aa6.39□□□□□ -1.39
CYSTM1-203ENST00000509589 PGLYRP4Q96LB8 373 aa6.39□□□□□ -1.39
CYSTM1-203ENST00000509589 IFNA1P01562 189 aa6.38□□□□□ -1.39
CYSTM1-203ENST00000509589 RPS20P60866 119 aaKnown RBP6.38□□□□□ -1.39
CYSTM1-203ENST00000509589 TWIST1Q15672 202 aa6.38□□□□□ -1.39
CYSTM1-203ENST00000509589 REG3GQ6UW15 175 aa6.38□□□□□ -1.39
CYSTM1-203ENST00000509589 MUC2Q02817 5179 aa6.37□□□□□ -1.39
CYSTM1-203ENST00000509589 TRAV1-1A0A0B4J248 108 aa6.37□□□□□ -1.39
CYSTM1-203ENST00000509589 C19orf71A6NCJ1 209 aa6.37□□□□□ -1.39
CYSTM1-203ENST00000509589 APCSP02743 223 aa6.37□□□□□ -1.39
CYSTM1-203ENST00000509589 GNG4P50150 75 aa6.37□□□□□ -1.39
CYSTM1-203ENST00000509589 FOXA3P55318 350 aaPredicted RBP6.37□□□□□ -1.39
CYSTM1-203ENST00000509589 FOXI1Q12951 378 aa6.37□□□□□ -1.39
CYSTM1-203ENST00000509589 SRSF9Q13242 221 aaKnown RBP eCLIP6.37□□□□□ -1.39
CYSTM1-203ENST00000509589 SPINK6Q6UWN8 80 aa6.37□□□□□ -1.39
CYSTM1-203ENST00000509589 GATD1Q8NB37 220 aa6.37□□□□□ -1.39
CYSTM1-203ENST00000509589 MED9Q9NWA0 146 aa6.37□□□□□ -1.39
CYSTM1-203ENST00000509589 GVQW2A0A096LPI5 108 aaPredicted RBP6.36□□□□□ -1.39
CYSTM1-203ENST00000509589 LINC00862A6NCI5 91 aa6.36□□□□□ -1.39
CYSTM1-203ENST00000509589 CCL25O15444 150 aa6.36□□□□□ -1.39
CYSTM1-203ENST00000509589 FGF6P10767 208 aa6.36□□□□□ -1.39
CYSTM1-203ENST00000509589 GAGE2BQ13066 116 aa6.36□□□□□ -1.39
CYSTM1-203ENST00000509589 CARD19Q96LW7 228 aa6.36□□□□□ -1.39
CYSTM1-203ENST00000509589 XKRY2A2RUG3 117 aa6.35□□□□□ -1.39
CYSTM1-203ENST00000509589 F2Z2F3 143 aa6.35□□□□□ -1.39
CYSTM1-203ENST00000509589 COMMD7Q86VX2 200 aa6.35□□□□□ -1.39
CYSTM1-203ENST00000509589 C11orf52Q96A22 123 aa6.35□□□□□ -1.39
CYSTM1-203ENST00000509589 RNASE7Q9H1E1 156 aaKnown RBP6.35□□□□□ -1.39
CYSTM1-203ENST00000509589 MANBALQ9NQG1 85 aa6.35□□□□□ -1.39
CYSTM1-203ENST00000509589 TRBV20OR9-2A0A075B6H5 130 aa6.34□□□□□ -1.39
CYSTM1-203ENST00000509589 Q6ZRP5 223 aa6.34□□□□□ -1.39
CYSTM1-203ENST00000509589 NUDT10Q8NFP7 164 aa6.34□□□□□ -1.39
CYSTM1-203ENST00000509589 NUDT11Q96G61 164 aa6.34□□□□□ -1.39
CYSTM1-203ENST00000509589 LINC00959A0A1B0GUT2 108 aa6.33□□□□□ -1.4
CYSTM1-203ENST00000509589 SDHAF1A6NFY7 115 aa6.33□□□□□ -1.4
CYSTM1-203ENST00000509589 ZNF561-AS1K7EIQ3 104 aa6.33□□□□□ -1.4
CYSTM1-203ENST00000509589 BCL2P10415 239 aa6.33□□□□□ -1.4
CYSTM1-203ENST00000509589 PMCHP20382 165 aa6.33□□□□□ -1.4
CYSTM1-203ENST00000509589 TAGLN2P37802 199 aaKnown RBP6.33□□□□□ -1.4
CYSTM1-203ENST00000509589 CTRLP40313 264 aa6.33□□□□□ -1.4
CYSTM1-203ENST00000509589 SLC7A5P1Q8MH63 180 aa6.33□□□□□ -1.4
CYSTM1-203ENST00000509589 OR5A1Q8NGJ0 315 aa6.33□□□□□ -1.4
CYSTM1-203ENST00000509589 TMEM101Q96IK0 257 aa6.33□□□□□ -1.4
CYSTM1-203ENST00000509589 BTF3L4Q96K17 158 aa6.33□□□□□ -1.4
CYSTM1-203ENST00000509589 TMEM242Q9NWH2 141 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms