RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 TRAV8-6A0A0B4J262 113 aa6.65□□□□□ -1.34
HTT-205ENST00000509043 K7EQD1 137 aa6.65□□□□□ -1.34
HTT-205ENST00000509043 TAX1BP3O14907 124 aa6.65□□□□□ -1.34
HTT-205ENST00000509043 MRPS36P82909 103 aaKnown RBP6.65□□□□□ -1.34
HTT-205ENST00000509043 CITED1Q99966 193 aa6.65□□□□□ -1.34
HTT-205ENST00000509043 PRADC1Q9BSG0 188 aa6.65□□□□□ -1.34
HTT-205ENST00000509043 TP73-AS1Q9UF72 201 aa6.65□□□□□ -1.34
HTT-205ENST00000509043 ACANP16112 2415 aa6.64□□□□□ -1.35
HTT-205ENST00000509043 TRBV6-4A0A1B0GX49 114 aa6.64□□□□□ -1.35
HTT-205ENST00000509043 RPL35AP18077 110 aaKnown RBP6.64□□□□□ -1.35
HTT-205ENST00000509043 Q6ZSN1 163 aa6.64□□□□□ -1.35
HTT-205ENST00000509043 KIR2DL5BQ8NHK3 375 aa6.64□□□□□ -1.35
HTT-205ENST00000509043 PLEKHB2Q96CS7 222 aa6.64□□□□□ -1.35
HTT-205ENST00000509043 CHCHD7Q9BUK0 85 aa6.64□□□□□ -1.35
HTT-205ENST00000509043 GTSF1LQ9H1H1 148 aa6.64□□□□□ -1.35
HTT-205ENST00000509043 CSDC2Q9Y534 153 aaKnown RBP6.64□□□□□ -1.35
HTT-205ENST00000509043 PLAC8L1A1L4L8 177 aa6.63□□□□□ -1.35
HTT-205ENST00000509043 H7C423 109 aa6.63□□□□□ -1.35
HTT-205ENST00000509043 WIPF1O43516 503 aa6.63□□□□□ -1.35
HTT-205ENST00000509043 PRM2P04554 102 aa6.63□□□□□ -1.35
HTT-205ENST00000509043 UBE2V1Q13404 147 aa6.63□□□□□ -1.35
HTT-205ENST00000509043 TMEM170BQ5T4T1 132 aa6.63□□□□□ -1.35
HTT-205ENST00000509043 Q6ZTI0 123 aa6.63□□□□□ -1.35
HTT-205ENST00000509043 CEND1Q8N111 149 aa6.63□□□□□ -1.35
HTT-205ENST00000509043 NOP10Q9NPE3 64 aaKnown RBP6.63□□□□□ -1.35
HTT-205ENST00000509043 UBE2D4Q9Y2X8 147 aa6.63□□□□□ -1.35
HTT-205ENST00000509043 SORL1Q92673 2214 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 TRGV2A0A075B6R0 118 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 TMEM238LA0A1B0GVL6 79 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 TINCRA0A1B0GVN0 87 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 TMEM223A0PJW6 202 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 C9orf118A6NHY6 69 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 A6NJY4 79 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 ZNF815PA8K554 130 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 LEPROTO15243 131 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 SMIM13P0DJ93 91 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 APOC4P55056 127 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 TCTAP57738 103 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 UBE2D3P61077 147 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 UBE2D2P62837 147 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 MAPKAPK5-AS1Q8N8E1 139 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 WFDC9Q8NEX5 89 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 ZNRF2Q8NHG8 242 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 ZNF479Q96JC4 524 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 HIST1H4GQ99525 98 aa6.62□□□□□ -1.35
HTT-205ENST00000509043 MTORP42345 2549 aa6.61□□□□□ -1.35
HTT-205ENST00000509043 NF1P21359 2839 aa6.61□□□□□ -1.35
HTT-205ENST00000509043 LGALS3P17931 250 aaKnown RBP6.61□□□□□ -1.35
HTT-205ENST00000509043 GCSHP23434 173 aa6.61□□□□□ -1.35
HTT-205ENST00000509043 PTTG1IPP53801 180 aa6.61□□□□□ -1.35
HTT-205ENST00000509043 VAMP3Q15836 100 aa6.61□□□□□ -1.35
HTT-205ENST00000509043 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
HTT-205ENST00000509043 LINC00612Q8N6U2 182 aa6.61□□□□□ -1.35
HTT-205ENST00000509043 WFDC10AQ9H1F0 79 aa6.61□□□□□ -1.35
HTT-205ENST00000509043 SPANXB1Q9NS25 103 aaPredicted RBP6.61□□□□□ -1.35
HTT-205ENST00000509043 HECTD1Q9ULT8 2610 aa6.61□□□□□ -1.35
HTT-205ENST00000509043 OTOGQ6ZRI0 2925 aa6.6□□□□□ -1.35
HTT-205ENST00000509043 J3QQQ9 107 aa6.6□□□□□ -1.35
HTT-205ENST00000509043 ZNF22P17026 224 aaPredicted RBP6.6□□□□□ -1.35
HTT-205ENST00000509043 TIRAPP58753 221 aa6.6□□□□□ -1.35
HTT-205ENST00000509043 DGAT2L7PQ6IED9 249 aa6.6□□□□□ -1.35
HTT-205ENST00000509043 GTF2H5Q6ZYL4 71 aa6.6□□□□□ -1.35
HTT-205ENST00000509043 FAM19A3Q7Z5A8 133 aa6.6□□□□□ -1.35
HTT-205ENST00000509043 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.6□□□□□ -1.35
HTT-205ENST00000509043 SLC25A29Q8N8R3 303 aa6.6□□□□□ -1.35
HTT-205ENST00000509043 KRTAP3-3Q9BYR6 98 aa6.6□□□□□ -1.35
HTT-205ENST00000509043 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
HTT-205ENST00000509043 TTTY13Q9BZ97 58 aa6.6□□□□□ -1.35
HTT-205ENST00000509043 TRGV4A0A0C4DH28 118 aa6.59□□□□□ -1.35
HTT-205ENST00000509043 A0A0J9YXV3 536 aa6.59□□□□□ -1.35
HTT-205ENST00000509043 A0A1B0GWB2 263 aa6.59□□□□□ -1.35
HTT-205ENST00000509043 GAGE12BA1L429 117 aa6.59□□□□□ -1.35
HTT-205ENST00000509043 LYRM9A8MSI8 78 aa6.59□□□□□ -1.35
HTT-205ENST00000509043 GAGE7O76087 117 aa6.59□□□□□ -1.35
HTT-205ENST00000509043 GAGE12FP0CL80 117 aa6.59□□□□□ -1.35
HTT-205ENST00000509043 GAGE12GP0CL81 117 aa6.59□□□□□ -1.35
HTT-205ENST00000509043 GAGE12IP0CL82 117 aa6.59□□□□□ -1.35
HTT-205ENST00000509043 NACAE9PAV3 2078 aa6.58□□□□□ -1.36
HTT-205ENST00000509043 IGLV5-45A0A087WSX0 123 aa6.58□□□□□ -1.36
HTT-205ENST00000509043 FXYD2P54710 66 aa6.58□□□□□ -1.36
HTT-205ENST00000509043 HERVK_113P63121 156 aa6.58□□□□□ -1.36
HTT-205ENST00000509043 OR5A1Q8NGJ0 315 aa6.58□□□□□ -1.36
HTT-205ENST00000509043 PHLDA1Q8WV24 401 aaPredicted RBP6.58□□□□□ -1.36
HTT-205ENST00000509043 FAM104AQ969W3 186 aa6.58□□□□□ -1.36
HTT-205ENST00000509043 TMEM101Q96IK0 257 aa6.58□□□□□ -1.36
HTT-205ENST00000509043 OPRPNQ99935 248 aaPredicted RBP6.58□□□□□ -1.36
HTT-205ENST00000509043 TMEM243Q9BU79 118 aa6.58□□□□□ -1.36
HTT-205ENST00000509043 NSD1Q96L73 2696 aaPredicted RBP6.57□□□□□ -1.36
HTT-205ENST00000509043 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.57□□□□□ -1.36
HTT-205ENST00000509043 IGHV3-38A0A0C4DH36 116 aa6.57□□□□□ -1.36
HTT-205ENST00000509043 IGHV1-58A0A0C4DH39 117 aa6.57□□□□□ -1.36
HTT-205ENST00000509043 A0A0J9YY99 117 aa6.57□□□□□ -1.36
HTT-205ENST00000509043 IGKV2-29A2NJV5 120 aaPredicted RBP6.57□□□□□ -1.36
HTT-205ENST00000509043 LINC00694P0DN24 101 aa6.57□□□□□ -1.36
HTT-205ENST00000509043 UBE2D1P51668 147 aa6.57□□□□□ -1.36
HTT-205ENST00000509043 EMP1P54849 157 aa6.57□□□□□ -1.36
HTT-205ENST00000509043 SRSF9Q13242 221 aaKnown RBP eCLIP6.57□□□□□ -1.36
HTT-205ENST00000509043 FHL2Q14192 279 aa6.57□□□□□ -1.36
HTT-205ENST00000509043 SBSPONQ8IVN8 264 aa6.57□□□□□ -1.36
HTT-205ENST00000509043 DEFB104AQ8WTQ1 72 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms