RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 PATE2Q6UY27 113 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 SDIM1Q6ZPB5 146 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 SHANK2-AS3Q9BTD1 123 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 SMIM2Q9BVW6 85 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 FGF23Q9GZV9 251 aaPredicted RBP3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 JMJD1CQ15652 2540 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 UNC13CQ8NB66 2214 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 PRRC2CQ9Y520 2896 aaKnown RBP3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 TACC2O95359 2948 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 IGLV2-18A0A075B6J9 118 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 IGHV4-4A0A075B6R2 117 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 TRAV3A0A0B4J244 114 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 IGHV5-51A0A0C4DH38 117 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 A0A0J9YWU9 116 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 A0A0J9YXY3 114 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 LST1O00453 97 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 MRPS12O15235 138 aaKnown RBP3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 SH2D1AO60880 128 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 TSHBP01222 138 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 SAA2P0DJI9 122 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 PFN2P35080 140 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 C17orf82Q86X59 251 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 TMEM263Q8WUH6 116 aaKnown RBP3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 PATE1Q8WXA2 126 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 RNF125Q96EQ8 232 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 TIMM17AQ99595 171 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 LINC00574Q9H8X3 128 aa3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 COL27A1Q8IZC6 1860 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-211ENST00000508531 IGKV1D-37A0A075B6S9 117 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 IGHV3-15A0A0B4J1V0 119 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 hADV29S1A0JD25 119 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 KNCNA6PVL3 124 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 TMEM178BH3BS89 294 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 J3QQQ9 107 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 LEPROTO15243 131 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 IGHG2P01859 326 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 EFNA4P52798 201 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 SYNJ2BPP57105 145 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 ERCC8Q13216 396 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 C1orf195Q5TG92 126 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 Q6JHZ5 121 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 APRG1Q8IVJ8 170 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 VKORC1L1Q8N0U8 176 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 FAM216BQ8N7L0 139 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 RNF185Q96GF1 192 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 SMR3AQ99954 134 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 SRXN1Q9BYN0 137 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 TTTY13Q9BZ97 58 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 PYGO1Q9Y3Y4 419 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 ICOSQ9Y6W8 199 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 DCHS2Q6V1P9 2916 aa3.38□□□□□ -1.87
PDLIM5-211ENST00000508531 IGHV3-43A0A0B4J1X8 118 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 FAM236DA0A1B0GTK5 79 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 TMEM223A0PJW6 202 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 DEFB108AA8MXU0 73 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 LMO7DNF2Z398 122 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 H3BRN7 92 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 H7C423 109 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 CXCL13O43927 109 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 TIMM17BO60830 172 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 DNAL4O96015 105 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 SAA1P0DJI8 122 aaPredicted RBP3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 IGHV3-43DP0DP04 118 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 FAM236CP0DP71 79 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 RPL39P5Q59GN2 51 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 HRCT1Q6UXD1 115 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 C2orf66Q6UXQ4 117 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 ZNF833PQ6ZTB9 187 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 C2orf48Q96LS8 159 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 TP53TG1Q9Y2A0 90 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 COL6A5A8TX70 2615 aa3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 FBN1P35555 2871 aaKnown RBP3.37□□□□□ -1.87
PDLIM5-211ENST00000508531 MAP1AP78559 2803 aaPredicted RBP3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 ATRQ13535 2644 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 TRGV5A0A0B4J1U4 118 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 TRBV10-3A0A0K0K1G6 114 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 SRRM5B3KS81 715 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 C10orf142B7Z368 130 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 IGHV1-69P01742 117 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 IGHV3-13P01766 116 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 GFERP55789 205 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 B3GALT5-AS1P59052 145 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 LYZP61626 148 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 CIRBPQ14011 172 aaKnown RBP3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 Q5XG85 94 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 SPINK14Q6IE38 97 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 SFTA2Q6UW10 78 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 WDR86Q86TI4 376 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 TMEM86BQ8N661 226 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 MRPL53Q96EL3 112 aaKnown RBP3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 RNF5Q99942 180 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 TIMM21Q9BVV7 248 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 DPH3P1Q9H4G8 78 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 LENEPQ9Y5L5 61 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 USF3Q68DE3 2245 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 ABCA4P78363 2273 aa3.36□□□□□ -1.87
PDLIM5-211ENST00000508531 VPS13CQ709C8 3753 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 STAB1Q9NY15 2570 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 IGHV1OR21-1A0A087WYE8 117 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms