RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 CRIP2P52943 208 aaPredicted RBP9.53□□□□□ -0.88
SMG7-214ENST00000508461 CFAP46Q8IYW2 2715 aa9.53□□□□□ -0.88
SMG7-214ENST00000508461 C11orf68Q9H3H3 251 aaKnown RBP9.53□□□□□ -0.88
SMG7-214ENST00000508461 TSPAN13O95857 204 aa9.53□□□□□ -0.88
SMG7-214ENST00000508461 PF4P02776 101 aa9.53□□□□□ -0.88
SMG7-214ENST00000508461 A0A0J9YY99 117 aa9.52□□□□□ -0.88
SMG7-214ENST00000508461 IGHV4-31P0DP07 118 aa9.52□□□□□ -0.88
SMG7-214ENST00000508461 RPL13AP40429 203 aaKnown RBP9.52□□□□□ -0.88
SMG7-214ENST00000508461 TRBV7-3A0A075B6L6 115 aa9.52□□□□□ -0.89
SMG7-214ENST00000508461 RHODO00212 210 aa9.52□□□□□ -0.89
SMG7-214ENST00000508461 DEFB130BP0DP73 79 aa9.52□□□□□ -0.89
SMG7-214ENST00000508461 DEFB130AP0DP74 79 aa9.52□□□□□ -0.89
SMG7-214ENST00000508461 H3BMM0 161 aa9.51□□□□□ -0.89
SMG7-214ENST00000508461 TMEM101Q96IK0 257 aa9.51□□□□□ -0.89
SMG7-214ENST00000508461 CHCHD5Q9BSY4 110 aa9.51□□□□□ -0.89
SMG7-214ENST00000508461 ZNF702PQ9H963 129 aa9.51□□□□□ -0.89
SMG7-214ENST00000508461 NOP10Q9NPE3 64 aaKnown RBP9.51□□□□□ -0.89
SMG7-214ENST00000508461 ZNF580Q9UK33 172 aa9.51□□□□□ -0.89
SMG7-214ENST00000508461 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.51□□□□□ -0.89
SMG7-214ENST00000508461 TRBV27A0A0K0K1C4 114 aa9.51□□□□□ -0.89
SMG7-214ENST00000508461 LGALS9O00182 355 aa9.51□□□□□ -0.89
SMG7-214ENST00000508461 INSL3P51460 131 aa9.51□□□□□ -0.89
SMG7-214ENST00000508461 Q6YL49 198 aa9.51□□□□□ -0.89
SMG7-214ENST00000508461 FLNAP21333 2647 aaKnown RBP9.51□□□□□ -0.89
SMG7-214ENST00000508461 IGIPA6NJ69 53 aa9.5□□□□□ -0.89
SMG7-214ENST00000508461 LEPROTO15243 131 aa9.5□□□□□ -0.89
SMG7-214ENST00000508461 PRIMA1Q86XR5 153 aa9.5□□□□□ -0.89
SMG7-214ENST00000508461 NDUFA11Q86Y39 141 aa9.5□□□□□ -0.89
SMG7-214ENST00000508461 MAP6D1Q9H9H5 199 aa9.5□□□□□ -0.89
SMG7-214ENST00000508461 TSPEAR-AS2P59090 65 aa9.5□□□□□ -0.89
SMG7-214ENST00000508461 C10orf126Q8N4M7 172 aa9.5□□□□□ -0.89
SMG7-214ENST00000508461 IGLV4-3A0A075B6K6 122 aa9.5□□□□□ -0.89
SMG7-214ENST00000508461 CCL24O00175 119 aa9.5□□□□□ -0.89
SMG7-214ENST00000508461 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
SMG7-214ENST00000508461 Q6ZUT4 128 aa9.5□□□□□ -0.89
SMG7-214ENST00000508461 CFC1BP0CG36 223 aa9.49□□□□□ -0.89
SMG7-214ENST00000508461 CFC1P0CG37 223 aa9.49□□□□□ -0.89
SMG7-214ENST00000508461 ZNF22P17026 224 aaPredicted RBP9.49□□□□□ -0.89
SMG7-214ENST00000508461 TSHBP01222 138 aa9.49□□□□□ -0.89
SMG7-214ENST00000508461 WFDC11Q8NEX6 87 aa9.49□□□□□ -0.89
SMG7-214ENST00000508461 C9orf85Q96MD7 179 aa9.49□□□□□ -0.89
SMG7-214ENST00000508461 UTP20O75691 2785 aaKnown RBP9.49□□□□□ -0.89
SMG7-214ENST00000508461 IGLV4-69A0A075B6H9 119 aa9.48□□□□□ -0.89
SMG7-214ENST00000508461 SLC25A20O43772 301 aa9.48□□□□□ -0.89
SMG7-214ENST00000508461 TCL1BO95988 128 aa9.48□□□□□ -0.89
SMG7-214ENST00000508461 OR13C6PQ8NH95 151 aa9.48□□□□□ -0.89
SMG7-214ENST00000508461 SPANXB1Q9NS25 103 aaPredicted RBP9.48□□□□□ -0.89
SMG7-214ENST00000508461 KIF25-AS1Q9Y6Z4 181 aa9.48□□□□□ -0.89
SMG7-214ENST00000508461 PRSS47A8MTI9 375 aa9.48□□□□□ -0.89
SMG7-214ENST00000508461 TEX15Q9BXT5 2789 aa9.47□□□□□ -0.89
SMG7-214ENST00000508461 LINC00315P59091 139 aa9.47□□□□□ -0.89
SMG7-214ENST00000508461 C2orf82Q6UX34 121 aa9.47□□□□□ -0.89
SMG7-214ENST00000508461 LINC00467Q9BRT7 94 aa9.47□□□□□ -0.89
SMG7-214ENST00000508461 TRBV20-1A0A075B6N2 111 aa9.47□□□□□ -0.89
SMG7-214ENST00000508461 HTN3P15516 51 aa9.47□□□□□ -0.89
SMG7-214ENST00000508461 GAGE6Q13070 117 aa9.47□□□□□ -0.89
SMG7-214ENST00000508461 SLC25A29Q8N8R3 303 aa9.47□□□□□ -0.89
SMG7-214ENST00000508461 CITED2Q99967 270 aaPredicted RBP9.47□□□□□ -0.89
SMG7-214ENST00000508461 Q9UF83 564 aa9.47□□□□□ -0.89
SMG7-214ENST00000508461 A0A096LPF7 62 aa9.46□□□□□ -0.89
SMG7-214ENST00000508461 A0A1B0GV72 72 aa9.46□□□□□ -0.89
SMG7-214ENST00000508461 NTN5Q8WTR8 489 aaPredicted RBP9.46□□□□□ -0.89
SMG7-214ENST00000508461 Q9H8V8 135 aa9.46□□□□□ -0.89
SMG7-214ENST00000508461 ATXN8Q156A1 80 aa9.46□□□□□ -0.9
SMG7-214ENST00000508461 TMEM89A2RUT3 159 aa9.46□□□□□ -0.9
SMG7-214ENST00000508461 LINC01546A6NGU7 62 aa9.46□□□□□ -0.9
SMG7-214ENST00000508461 SNCGO76070 127 aa9.45□□□□□ -0.9
SMG7-214ENST00000508461 MORN3Q6PF18 240 aaPredicted RBP9.45□□□□□ -0.9
SMG7-214ENST00000508461 Q6ZTI0 123 aa9.45□□□□□ -0.9
SMG7-214ENST00000508461 PPDPFLQ8WWR9 84 aa9.45□□□□□ -0.9
SMG7-214ENST00000508461 ODF3Q96PU9 254 aa9.45□□□□□ -0.9
SMG7-214ENST00000508461 WFDC10AQ9H1F0 79 aa9.45□□□□□ -0.9
SMG7-214ENST00000508461 BSNQ9UPA5 3926 aa9.45□□□□□ -0.9
SMG7-214ENST00000508461 DEFB114Q30KQ6 69 aa9.45□□□□□ -0.9
SMG7-214ENST00000508461 TRBV6-5A0A0K0K1A5 114 aa9.45□□□□□ -0.9
SMG7-214ENST00000508461 BBC3Q96PG8 261 aaPredicted RBP9.45□□□□□ -0.9
SMG7-214ENST00000508461 C1QTNF4Q9BXJ3 329 aa9.45□□□□□ -0.9
SMG7-214ENST00000508461 CHD6Q8TD26 2715 aa9.45□□□□□ -0.9
SMG7-214ENST00000508461 ITPR3Q14573 2671 aa9.45□□□□□ -0.9
SMG7-214ENST00000508461 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 TMEM223A0PJW6 202 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 RBMY1A1P0DJD3 496 aaKnown RBP9.44□□□□□ -0.9
SMG7-214ENST00000508461 RBMY1CP0DJD4 496 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 LINC00158P58513 81 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 FOXI1Q12951 378 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 RBMY1FQ15415 496 aaKnown RBP9.44□□□□□ -0.9
SMG7-214ENST00000508461 CDKN2A-AS1Q9UH64 79 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 DNAJC9-AS1A6NH13 148 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 IGHV3-30P01768 117 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 IGHV3-30-5P0DP03 117 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 CFAP126Q5VTH2 177 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 Q6ZSV7 163 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 ANKRD29Q8N6D5 301 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 TEX29Q8N6K0 151 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 FAM19A4Q96LR4 140 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 HECTD1Q9ULT8 2610 aa9.44□□□□□ -0.9
SMG7-214ENST00000508461 C4orf3Q8WVX3 66 aa9.43□□□□□ -0.9
SMG7-214ENST00000508461 CLPSL2Q6UWE3 100 aa9.43□□□□□ -0.9
SMG7-214ENST00000508461 CKS1BP61024 79 aa9.43□□□□□ -0.9
SMG7-214ENST00000508461 Q6ZSN1 163 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms