RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 TRAV8-4A0A0B4J246 113 aa7.21□□□□□ -1.26
PTPN13-207ENST00000508063 UBE2L6O14933 153 aa7.21□□□□□ -1.26
PTPN13-207ENST00000508063 CTRLP40313 264 aa7.21□□□□□ -1.26
PTPN13-207ENST00000508063 TWIST1Q15672 202 aa7.21□□□□□ -1.26
PTPN13-207ENST00000508063 CLPSL2Q6UWE3 100 aa7.21□□□□□ -1.26
PTPN13-207ENST00000508063 CLRN3Q8NCR9 226 aa7.21□□□□□ -1.26
PTPN13-207ENST00000508063 NUDT10Q8NFP7 164 aa7.21□□□□□ -1.26
PTPN13-207ENST00000508063 CIRBP-AS1Q8TBR5 109 aa7.21□□□□□ -1.26
PTPN13-207ENST00000508063 NUDT11Q96G61 164 aa7.21□□□□□ -1.26
PTPN13-207ENST00000508063 PGLYRP4Q96LB8 373 aa7.21□□□□□ -1.26
PTPN13-207ENST00000508063 A0A1B0GUV1 79 aa7.2□□□□□ -1.26
PTPN13-207ENST00000508063 REG3AQ06141 175 aa7.2□□□□□ -1.26
PTPN13-207ENST00000508063 COTL1Q14019 142 aa7.2□□□□□ -1.26
PTPN13-207ENST00000508063 SMIM15Q7Z3B0 74 aa7.2□□□□□ -1.26
PTPN13-207ENST00000508063 RPP21Q9H633 154 aaKnown RBP7.2□□□□□ -1.26
PTPN13-207ENST00000508063 FLG2Q5D862 2391 aaPredicted RBP7.19□□□□□ -1.26
PTPN13-207ENST00000508063 PRSS1P07477 247 aa7.19□□□□□ -1.26
PTPN13-207ENST00000508063 AMTP48728 403 aa7.19□□□□□ -1.26
PTPN13-207ENST00000508063 BLOC1S1P78537 153 aa7.19□□□□□ -1.26
PTPN13-207ENST00000508063 CNFNQ9BYD5 112 aa7.19□□□□□ -1.26
PTPN13-207ENST00000508063 KRTAP29-1A8MX34 341 aaPredicted RBP7.18□□□□□ -1.26
PTPN13-207ENST00000508063 TMEM250H0YL14 139 aa7.18□□□□□ -1.26
PTPN13-207ENST00000508063 KRTAP26-1Q6PEX3 210 aa7.18□□□□□ -1.26
PTPN13-207ENST00000508063 C9orf163Q8N9P6 203 aa7.18□□□□□ -1.26
PTPN13-207ENST00000508063 C20orf203Q8NBC4 194 aa7.18□□□□□ -1.26
PTPN13-207ENST00000508063 OCC1Q8TAD7 63 aa7.18□□□□□ -1.26
PTPN13-207ENST00000508063 RNASE7Q9H1E1 156 aaKnown RBP7.18□□□□□ -1.26
PTPN13-207ENST00000508063 IGLV10-54A0A075B6I4 117 aa7.17□□□□□ -1.26
PTPN13-207ENST00000508063 K7EN84 100 aa7.17□□□□□ -1.26
PTPN13-207ENST00000508063 IFITM2Q01629 132 aa7.17□□□□□ -1.26
PTPN13-207ENST00000508063 TEX261Q6UWH6 196 aa7.17□□□□□ -1.26
PTPN13-207ENST00000508063 AP5S1Q9NUS5 200 aa7.17□□□□□ -1.26
PTPN13-207ENST00000508063 IGLV4-60A0A075B6I1 120 aa7.16□□□□□ -1.26
PTPN13-207ENST00000508063 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.16□□□□□ -1.26
PTPN13-207ENST00000508063 hDV102S1A0JD36 115 aa7.16□□□□□ -1.26
PTPN13-207ENST00000508063 A8MWL6 223 aa7.16□□□□□ -1.26
PTPN13-207ENST00000508063 GATCO43716 136 aaKnown RBP7.16□□□□□ -1.26
PTPN13-207ENST00000508063 NCR2O95944 276 aa7.16□□□□□ -1.26
PTPN13-207ENST00000508063 GATD1Q8NB37 220 aa7.16□□□□□ -1.26
PTPN13-207ENST00000508063 BORCS7Q96B45 105 aa7.16□□□□□ -1.26
PTPN13-207ENST00000508063 CNBPP62633 177 aaKnown RBP7.15□□□□□ -1.26
PTPN13-207ENST00000508063 NDUFA5Q16718 116 aa7.15□□□□□ -1.26
PTPN13-207ENST00000508063 AMMECR1LQ6DCA0 310 aa7.15□□□□□ -1.26
PTPN13-207ENST00000508063 CFAP161Q6P656 301 aa7.15□□□□□ -1.26
PTPN13-207ENST00000508063 ALKAL2Q6UX46 152 aa7.15□□□□□ -1.26
PTPN13-207ENST00000508063 FAM231DQ6ZW35 169 aa7.15□□□□□ -1.26
PTPN13-207ENST00000508063 KRTAP4-8Q9BYQ9 185 aa7.15□□□□□ -1.26
PTPN13-207ENST00000508063 IGHV3-64A0A075B6Q5 118 aa7.14□□□□□ -1.27
PTPN13-207ENST00000508063 H7C423 109 aa7.14□□□□□ -1.27
PTPN13-207ENST00000508063 RPL37AP61513 92 aaKnown RBP7.14□□□□□ -1.27
PTPN13-207ENST00000508063 CT83Q5H943 113 aa7.14□□□□□ -1.27
PTPN13-207ENST00000508063 GTSF1Q8WW33 167 aa7.14□□□□□ -1.27
PTPN13-207ENST00000508063 TRAV26-2A0A0B4J265 109 aa7.13□□□□□ -1.27
PTPN13-207ENST00000508063 NDUFS6O75380 124 aaKnown RBP7.13□□□□□ -1.27
PTPN13-207ENST00000508063 OXTP01178 125 aa7.13□□□□□ -1.27
PTPN13-207ENST00000508063 APCSP02743 223 aa7.13□□□□□ -1.27
PTPN13-207ENST00000508063 CEBPGP53567 150 aa7.13□□□□□ -1.27
PTPN13-207ENST00000508063 KRTAP10-4P60372 401 aaPredicted RBP7.13□□□□□ -1.27
PTPN13-207ENST00000508063 SDIM1Q6ZPB5 146 aa7.13□□□□□ -1.27
PTPN13-207ENST00000508063 LYPD6BQ8NI32 183 aa7.13□□□□□ -1.27
PTPN13-207ENST00000508063 FAM210AQ96ND0 272 aa7.13□□□□□ -1.27
PTPN13-207ENST00000508063 EIF5A2Q9GZV4 153 aaKnown RBP7.13□□□□□ -1.27
PTPN13-207ENST00000508063 GFRA4Q9GZZ7 299 aa7.13□□□□□ -1.27
PTPN13-207ENST00000508063 H3BS24 57 aa7.12□□□□□ -1.27
PTPN13-207ENST00000508063 PMCHP20382 165 aa7.12□□□□□ -1.27
PTPN13-207ENST00000508063 FOXA3P55318 350 aaPredicted RBP7.12□□□□□ -1.27
PTPN13-207ENST00000508063 RNASEKQ6P5S7 137 aaKnown RBP7.12□□□□□ -1.27
PTPN13-207ENST00000508063 RPL39LQ96EH5 51 aaKnown RBP7.12□□□□□ -1.27
PTPN13-207ENST00000508063 DPH3Q96FX2 82 aa7.12□□□□□ -1.27
PTPN13-207ENST00000508063 RNF185Q96GF1 192 aa7.12□□□□□ -1.27
PTPN13-207ENST00000508063 BTF3L4Q96K17 158 aa7.12□□□□□ -1.27
PTPN13-207ENST00000508063 IGKV3OR2-268A0A0C4DH90 116 aa7.11□□□□□ -1.27
PTPN13-207ENST00000508063 TRBV6-5A0A0K0K1A5 114 aa7.11□□□□□ -1.27
PTPN13-207ENST00000508063 GAGE12HA6NDE8 117 aa7.11□□□□□ -1.27
PTPN13-207ENST00000508063 SDHAF1A6NFY7 115 aa7.11□□□□□ -1.27
PTPN13-207ENST00000508063 I3L3M4 83 aa7.11□□□□□ -1.27
PTPN13-207ENST00000508063 ZNF25P17030 456 aaPredicted RBP7.11□□□□□ -1.27
PTPN13-207ENST00000508063 TMEM101Q96IK0 257 aa7.11□□□□□ -1.27
PTPN13-207ENST00000508063 SMIM7Q9BQ49 75 aa7.11□□□□□ -1.27
PTPN13-207ENST00000508063 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.11□□□□□ -1.27
PTPN13-207ENST00000508063 A0A1B0GUT8 65 aa7.1□□□□□ -1.27
PTPN13-207ENST00000508063 FAM231BA6NCW3 169 aa7.1□□□□□ -1.27
PTPN13-207ENST00000508063 FGF6P10767 208 aa7.1□□□□□ -1.27
PTPN13-207ENST00000508063 CIRBPQ14011 172 aaKnown RBP7.1□□□□□ -1.27
PTPN13-207ENST00000508063 TSKUQ8WUA8 353 aa7.1□□□□□ -1.27
PTPN13-207ENST00000508063 ST20Q9HBF5 79 aa7.1□□□□□ -1.27
PTPN13-207ENST00000508063 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.09□□□□□ -1.27
PTPN13-207ENST00000508063 IGKV2-29A2NJV5 120 aaPredicted RBP7.09□□□□□ -1.27
PTPN13-207ENST00000508063 ZNF727A8MUV8 499 aa7.09□□□□□ -1.27
PTPN13-207ENST00000508063 ATP6V1G1O75348 118 aa7.09□□□□□ -1.27
PTPN13-207ENST00000508063 RAB14P61106 215 aa7.09□□□□□ -1.27
PTPN13-207ENST00000508063 SERTAD4-AS1Q5TG53 156 aa7.09□□□□□ -1.27
PTPN13-207ENST00000508063 LINC01551Q86U37 167 aa7.09□□□□□ -1.27
PTPN13-207ENST00000508063 OR5A1Q8NGJ0 315 aa7.09□□□□□ -1.27
PTPN13-207ENST00000508063 CHCHD10Q8WYQ3 142 aaPredicted RBP7.09□□□□□ -1.27
PTPN13-207ENST00000508063 TMEM191AQ9H0A3 160 aa7.09□□□□□ -1.27
PTPN13-207ENST00000508063 OSTCQ9NRP0 149 aa7.09□□□□□ -1.27
PTPN13-207ENST00000508063 HIGD1CA8MV81 97 aa7.08□□□□□ -1.28
PTPN13-207ENST00000508063 PANO1I0J062 215 aa7.08□□□□□ -1.28
PTPN13-207ENST00000508063 RPS10P46783 165 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms