RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 NACAE9PAV3 2078 aa16.1■□□□□ 0.17
SPCS3-203ENST00000507678 CD28P10747 220 aa16.1■□□□□ 0.17
SPCS3-203ENST00000507678 RNF183Q96D59 192 aa16.1■□□□□ 0.17
SPCS3-203ENST00000507678 TMEM141Q96I45 108 aa16.1■□□□□ 0.17
SPCS3-203ENST00000507678 JMJD1CQ15652 2540 aa16.1■□□□□ 0.17
SPCS3-203ENST00000507678 TIMM17AQ99595 171 aa16.1■□□□□ 0.17
SPCS3-203ENST00000507678 IGHV3-64A0A075B6Q5 118 aa16.09■□□□□ 0.17
SPCS3-203ENST00000507678 I3L3M4 83 aa16.09■□□□□ 0.17
SPCS3-203ENST00000507678 TSPAN13O95857 204 aa16.08■□□□□ 0.16
SPCS3-203ENST00000507678 FOXI1Q12951 378 aa16.08■□□□□ 0.16
SPCS3-203ENST00000507678 Q6ZSN1 163 aa16.08■□□□□ 0.16
SPCS3-203ENST00000507678 SRSF9Q13242 221 aaKnown RBP eCLIP16.07■□□□□ 0.16
SPCS3-203ENST00000507678 FHL3Q13643 280 aa16.07■□□□□ 0.16
SPCS3-203ENST00000507678 CEMP1Q6PRD7 247 aaPredicted RBP16.07■□□□□ 0.16
SPCS3-203ENST00000507678 TRBV7-3A0A075B6L6 115 aa16.07■□□□□ 0.16
SPCS3-203ENST00000507678 HERVK_113P61574 105 aa16.07■□□□□ 0.16
SPCS3-203ENST00000507678 RNASE13Q5GAN3 156 aaKnown RBP16.07■□□□□ 0.16
SPCS3-203ENST00000507678 CFAP161Q6P656 301 aa16.07■□□□□ 0.16
SPCS3-203ENST00000507678 YAE1D1Q9NRH1 226 aa16.07■□□□□ 0.16
SPCS3-203ENST00000507678 M0R2P5 195 aa16.06■□□□□ 0.16
SPCS3-203ENST00000507678 TSPEAR-AS2P59090 65 aa16.06■□□□□ 0.16
SPCS3-203ENST00000507678 ZNF415Q09FC8 603 aa16.06■□□□□ 0.16
SPCS3-203ENST00000507678 NSUN5P1Q3KNT7 163 aa16.06■□□□□ 0.16
SPCS3-203ENST00000507678 C20orf203Q8NBC4 194 aa16.06■□□□□ 0.16
SPCS3-203ENST00000507678 CITED2Q99967 270 aaPredicted RBP16.06■□□□□ 0.16
SPCS3-203ENST00000507678 XGP55808 180 aa16.05■□□□□ 0.16
SPCS3-203ENST00000507678 TNFRSF18Q9Y5U5 241 aa16.05■□□□□ 0.16
SPCS3-203ENST00000507678 CCL24O00175 119 aa16.05■□□□□ 0.16
SPCS3-203ENST00000507678 RHOHQ15669 191 aa16.05■□□□□ 0.16
SPCS3-203ENST00000507678 RRN3P1Q2M238 152 aa16.05■□□□□ 0.16
SPCS3-203ENST00000507678 IGHV3-38A0A0C4DH36 116 aa16.04■□□□□ 0.16
SPCS3-203ENST00000507678 ODF3L2Q3SX64 289 aa16.04■□□□□ 0.16
SPCS3-203ENST00000507678 NFE4Q86UQ8 179 aa16.04■□□□□ 0.16
SPCS3-203ENST00000507678 HELZ2Q9BYK8 2649 aaKnown RBP16.04■□□□□ 0.16
SPCS3-203ENST00000507678 TAL2Q16559 108 aa16.04■□□□□ 0.16
SPCS3-203ENST00000507678 PAPPA-AS1Q5QFB9 102 aa16.03■□□□□ 0.16
SPCS3-203ENST00000507678 PDZD2O15018 2839 aa16.03■□□□□ 0.16
SPCS3-203ENST00000507678 LINC01549A6NIU2 74 aa16.03■□□□□ 0.16
SPCS3-203ENST00000507678 INSP01308 110 aa16.03■□□□□ 0.16
SPCS3-203ENST00000507678 Q6ZUT4 128 aa16.03■□□□□ 0.16
SPCS3-203ENST00000507678 STHQ8IWL8 128 aa16.03■□□□□ 0.16
SPCS3-203ENST00000507678 TMEM86BQ8N661 226 aa16.02■□□□□ 0.16
SPCS3-203ENST00000507678 C1QTNF4Q9BXJ3 329 aa16.02■□□□□ 0.16
SPCS3-203ENST00000507678 SFTA2Q6UW10 78 aa16.02■□□□□ 0.16
SPCS3-203ENST00000507678 VCX2Q9H322 139 aa16.02■□□□□ 0.16
SPCS3-203ENST00000507678 ERG28Q9UKR5 140 aa16.02■□□□□ 0.16
SPCS3-203ENST00000507678 A0A0J9YXV3 536 aa16.02■□□□□ 0.15
SPCS3-203ENST00000507678 SMCPP49901 116 aaPredicted RBP16.02■□□□□ 0.15
SPCS3-203ENST00000507678 CFAP126Q5VTH2 177 aa16.02■□□□□ 0.15
SPCS3-203ENST00000507678 TRAV2A0A0B4J234 112 aa16.01■□□□□ 0.15
SPCS3-203ENST00000507678 A8MTW9 85 aa16.01■□□□□ 0.15
SPCS3-203ENST00000507678 A8MWV9 139 aa16.01■□□□□ 0.15
SPCS3-203ENST00000507678 IGLV4-3A0A075B6K6 122 aa16.01■□□□□ 0.15
SPCS3-203ENST00000507678 PTH2Q96A98 100 aa16■□□□□ 0.15
SPCS3-203ENST00000507678 C11orf72Q8NBR9 251 aa16■□□□□ 0.15
SPCS3-203ENST00000507678 SETXQ7Z333 2677 aaKnown RBP15.98■□□□□ 0.15
SPCS3-203ENST00000507678 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.98■□□□□ 0.15
SPCS3-203ENST00000507678 IGKV2-29A2NJV5 120 aaPredicted RBP15.98■□□□□ 0.15
SPCS3-203ENST00000507678 ANAPC13Q9BS18 74 aa15.98■□□□□ 0.15
SPCS3-203ENST00000507678 PGPEP1Q9NXJ5 209 aa15.98■□□□□ 0.15
SPCS3-203ENST00000507678 J3QQQ9 107 aa15.98■□□□□ 0.15
SPCS3-203ENST00000507678 LGALS3P17931 250 aaKnown RBP15.98■□□□□ 0.15
SPCS3-203ENST00000507678 WFDC10AQ9H1F0 79 aa15.97■□□□□ 0.15
SPCS3-203ENST00000507678 C2CD3Q4AC94 2353 aa15.97■□□□□ 0.15
SPCS3-203ENST00000507678 LINC01006Q8NI28 216 aa15.97■□□□□ 0.15
SPCS3-203ENST00000507678 A0A0J9YY99 117 aa15.96■□□□□ 0.15
SPCS3-203ENST00000507678 B5MCH6 92 aa15.96■□□□□ 0.15
SPCS3-203ENST00000507678 IGHV3-53P01767 116 aa15.96■□□□□ 0.15
SPCS3-203ENST00000507678 KRTAP1-1Q07627 177 aa15.96■□□□□ 0.15
SPCS3-203ENST00000507678 SPXQ9BT56 116 aa15.96■□□□□ 0.15
SPCS3-203ENST00000507678 FASNP49327 2511 aaKnown RBP15.96■□□□□ 0.14
SPCS3-203ENST00000507678 TRGV1A0A0A0MS02 117 aa15.95■□□□□ 0.14
SPCS3-203ENST00000507678 ZNF22P17026 224 aaPredicted RBP15.95■□□□□ 0.14
SPCS3-203ENST00000507678 C1orf158Q8N1D5 194 aa15.94■□□□□ 0.14
SPCS3-203ENST00000507678 TEX29Q8N6K0 151 aa15.94■□□□□ 0.14
SPCS3-203ENST00000507678 NOTCH2Q04721 2471 aa15.94■□□□□ 0.14
SPCS3-203ENST00000507678 SHISA2Q6UWI4 295 aa15.94■□□□□ 0.14
SPCS3-203ENST00000507678 ADARB2-AS1A8MUL3 147 aa15.93■□□□□ 0.14
SPCS3-203ENST00000507678 RHODO00212 210 aa15.93■□□□□ 0.14
SPCS3-203ENST00000507678 PSMB2P49721 201 aa15.93■□□□□ 0.14
SPCS3-203ENST00000507678 UNC79Q9P2D8 2635 aa15.93■□□□□ 0.14
SPCS3-203ENST00000507678 SMR3AQ99954 134 aa15.93■□□□□ 0.14
SPCS3-203ENST00000507678 TMEM223A0PJW6 202 aa15.92■□□□□ 0.14
SPCS3-203ENST00000507678 CARD19Q96LW7 228 aa15.92■□□□□ 0.14
SPCS3-203ENST00000507678 LOC107984156A0A0G2JMH3 177 aa15.92■□□□□ 0.14
SPCS3-203ENST00000507678 GAGE5Q13069 117 aa15.92■□□□□ 0.14
SPCS3-203ENST00000507678 GAGE6Q13070 117 aa15.92■□□□□ 0.14
SPCS3-203ENST00000507678 ARL17AQ8IVW1 177 aa15.92■□□□□ 0.14
SPCS3-203ENST00000507678 ATP6V0E2Q8NHE4 81 aa15.92■□□□□ 0.14
SPCS3-203ENST00000507678 A6NJY4 79 aa15.91■□□□□ 0.14
SPCS3-203ENST00000507678 FAM104AQ969W3 186 aa15.91■□□□□ 0.14
SPCS3-203ENST00000507678 LINC00467Q9BRT7 94 aa15.91■□□□□ 0.14
SPCS3-203ENST00000507678 RPL35AP18077 110 aaKnown RBP15.91■□□□□ 0.14
SPCS3-203ENST00000507678 TRAV8-3A0A0A6YYJ7 113 aa15.9■□□□□ 0.14
SPCS3-203ENST00000507678 AMELXQ99217 191 aa15.9■□□□□ 0.14
SPCS3-203ENST00000507678 CHCHD7Q9BUK0 85 aa15.9■□□□□ 0.14
SPCS3-203ENST00000507678 PLA2G2AP14555 144 aa15.9■□□□□ 0.14
SPCS3-203ENST00000507678 ANK3Q12955 4377 aaKnown RBP15.89■□□□□ 0.13
SPCS3-203ENST00000507678 Q6ZTI0 123 aa15.89■□□□□ 0.13
SPCS3-203ENST00000507678 TRAV25A0A0B4J276 109 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 998.8 ms