RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 TMEM126AQ9H061 195 aa4.3□□□□□ -1.72
CLDND1-213ENST00000506927 DAZ3Q9NR90 486 aaKnown RBP4.3□□□□□ -1.72
CLDND1-213ENST00000506927 LINC00527Q9UJ94 153 aa4.3□□□□□ -1.72
CLDND1-213ENST00000506927 SELENOKQ9Y6D0 94 aa4.3□□□□□ -1.72
CLDND1-213ENST00000506927 POLEQ07864 2286 aa4.3□□□□□ -1.72
CLDND1-213ENST00000506927 ZNF318Q5VUA4 2279 aa4.3□□□□□ -1.72
CLDND1-213ENST00000506927 CFAP54Q96N23 3096 aa4.3□□□□□ -1.72
CLDND1-213ENST00000506927 OTOGLQ3ZCN5 2332 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 ABCA1O95477 2261 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 TRAV13-2A0A0B4J235 113 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 H7C2G1 150 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 LST1O00453 97 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 IGHV3-53P01767 116 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 TRACP01848 142 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 MT-ATP8P03928 68 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 INSL3P51460 131 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 EMP1P54849 157 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 XGP55808 180 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 NDUFV3P56181 108 aaKnown RBP4.29□□□□□ -1.72
CLDND1-213ENST00000506927 BLCAPP62952 87 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 RPL36AP83881 106 aaKnown RBP4.29□□□□□ -1.72
CLDND1-213ENST00000506927 SPINK13Q1W4C9 94 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 FAM19A3Q7Z5A8 133 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 DYNLRB2Q8TF09 96 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 RPL36ALQ969Q0 106 aaKnown RBP4.29□□□□□ -1.72
CLDND1-213ENST00000506927 CITED1Q99966 193 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 VPREB3Q9UKI3 123 aa4.29□□□□□ -1.72
CLDND1-213ENST00000506927 IGLV5-45A0A087WSX0 123 aa4.28□□□□□ -1.72
CLDND1-213ENST00000506927 IGHV4-61A0A0C4DH41 118 aa4.28□□□□□ -1.72
CLDND1-213ENST00000506927 IGHV4-38-2P0DP08 117 aa4.28□□□□□ -1.72
CLDND1-213ENST00000506927 SYNJ2BPP57105 145 aa4.28□□□□□ -1.72
CLDND1-213ENST00000506927 TSPEAR-AS2P59090 65 aa4.28□□□□□ -1.72
CLDND1-213ENST00000506927 FAM222AQ5U5X8 452 aa4.28□□□□□ -1.72
CLDND1-213ENST00000506927 Q6ZQT7 251 aa4.28□□□□□ -1.72
CLDND1-213ENST00000506927 TMEM61Q8N0U2 210 aa4.28□□□□□ -1.72
CLDND1-213ENST00000506927 LINC01587Q99440 93 aa4.28□□□□□ -1.72
CLDND1-213ENST00000506927 UBE2D4Q9Y2X8 147 aa4.28□□□□□ -1.72
CLDND1-213ENST00000506927 TNRC18O15417 2968 aaPredicted RBP4.28□□□□□ -1.72
CLDND1-213ENST00000506927 MYO15AQ9UKN7 3530 aa4.28□□□□□ -1.73
CLDND1-213ENST00000506927 NCOR1O75376 2440 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 FRYQ5TBA9 3013 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 PKDREJQ9NTG1 2253 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 IGHV3OR16-10A0A075B7F0 116 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 TRBV7-7A0A0K0K1E9 115 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 H0YGX0 51 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 COX7A2LO14548 114 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 UBE2L6O14933 153 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 RS1O15537 224 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 HOXD3P31249 432 aaPredicted RBP4.27□□□□□ -1.73
CLDND1-213ENST00000506927 CXCL5P42830 114 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 PROK1P58294 105 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 LY6DQ14210 128 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 LINC00643Q86TS7 51 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 TMEM86BQ8N661 226 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 C15orf53Q8NAA6 179 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 JPT2Q9H910 190 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 FRYLO94915 3013 aa4.27□□□□□ -1.73
CLDND1-213ENST00000506927 TRAV12-2A0A075B6T6 113 aa4.26□□□□□ -1.73
CLDND1-213ENST00000506927 DNAL4O96015 105 aa4.26□□□□□ -1.73
CLDND1-213ENST00000506927 IGKV3-20P01619 116 aa4.26□□□□□ -1.73
CLDND1-213ENST00000506927 DEFB131AP59861 70 aa4.26□□□□□ -1.73
CLDND1-213ENST00000506927 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
CLDND1-213ENST00000506927 S100A7L2Q5SY68 101 aa4.26□□□□□ -1.73
CLDND1-213ENST00000506927 STHQ8IWL8 128 aa4.26□□□□□ -1.73
CLDND1-213ENST00000506927 DAND5Q8N907 189 aa4.26□□□□□ -1.73
CLDND1-213ENST00000506927 C4orf3Q8WVX3 66 aa4.26□□□□□ -1.73
CLDND1-213ENST00000506927 BEX4Q9NWD9 120 aaPredicted RBP4.26□□□□□ -1.73
CLDND1-213ENST00000506927 VPS13AQ96RL7 3174 aa4.26□□□□□ -1.73
CLDND1-213ENST00000506927 IGHV3-64A0A075B6Q5 118 aa4.25□□□□□ -1.73
CLDND1-213ENST00000506927 A0A1W2PPR1 153 aa4.25□□□□□ -1.73
CLDND1-213ENST00000506927 RBMY1BA6NDE4 496 aaKnown RBP4.25□□□□□ -1.73
CLDND1-213ENST00000506927 RBMY1EA6NEQ0 496 aaKnown RBP4.25□□□□□ -1.73
CLDND1-213ENST00000506927 H3BQ85 93 aa4.25□□□□□ -1.73
CLDND1-213ENST00000506927 RBMY1DP0C7P1 496 aaKnown RBP4.25□□□□□ -1.73
CLDND1-213ENST00000506927 RBMY1A1P0DJD3 496 aaKnown RBP4.25□□□□□ -1.73
CLDND1-213ENST00000506927 RBMY1CP0DJD4 496 aa4.25□□□□□ -1.73
CLDND1-213ENST00000506927 DEFB112Q30KQ8 113 aa4.25□□□□□ -1.73
CLDND1-213ENST00000506927 HIST2H2BCQ6DN03 193 aa4.25□□□□□ -1.73
CLDND1-213ENST00000506927 HIST2H2BDQ6DRA6 164 aa4.25□□□□□ -1.73
CLDND1-213ENST00000506927 LITAFQ99732 161 aa4.25□□□□□ -1.73
CLDND1-213ENST00000506927 CHCHD7Q9BUK0 85 aa4.25□□□□□ -1.73
CLDND1-213ENST00000506927 IGHV4-30-2A0A087WSY4 118 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 IGLV5-39A0A0G2JS06 123 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 TEX49A0A1B0GTD5 131 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 TGFAP01135 160 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 IGHV4-59P01825 116 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 CRPP02741 224 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 HTN1P15515 57 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 Q8N2B8 174 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 C11orf44Q8N8P7 122 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 LINC00308Q8TCZ7 52 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 OPRPNQ99935 248 aaPredicted RBP4.24□□□□□ -1.73
CLDND1-213ENST00000506927 FAM110AQ9BQ89 295 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 TMEM243Q9BU79 118 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 Q9H8V8 135 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 ARHGAP32A7KAX9 2087 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 ROS1P08922 2347 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 MUC4Q99102 2169 aa4.24□□□□□ -1.73
CLDND1-213ENST00000506927 ANKHD1Q8IWZ3 2542 aaKnown RBP4.24□□□□□ -1.73
CLDND1-213ENST00000506927 RP1L1Q8IWN7 2480 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms