RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 PHOX2AO14813 284 aa8.37□□□□□ -1.07
PDGFRA-204ENST00000504461 CKS2P33552 79 aa8.37□□□□□ -1.07
PDGFRA-204ENST00000504461 C20orf78Q9BR46 151 aa8.37□□□□□ -1.07
PDGFRA-204ENST00000504461 LAMTOR2Q9Y2Q5 125 aa8.37□□□□□ -1.07
PDGFRA-204ENST00000504461 TRBV6-8A0A0A6YYG3 113 aa8.36□□□□□ -1.07
PDGFRA-204ENST00000504461 VCYO14598 125 aa8.36□□□□□ -1.07
PDGFRA-204ENST00000504461 TCAPO15273 167 aa8.36□□□□□ -1.07
PDGFRA-204ENST00000504461 NCR2O95944 276 aa8.36□□□□□ -1.07
PDGFRA-204ENST00000504461 MRPL51Q4U2R6 128 aaKnown RBP8.36□□□□□ -1.07
PDGFRA-204ENST00000504461 LINC01556Q5JQF7 62 aa8.36□□□□□ -1.07
PDGFRA-204ENST00000504461 CHCHD7Q9BUK0 85 aa8.36□□□□□ -1.07
PDGFRA-204ENST00000504461 GNB1LQ9BYB4 327 aa8.36□□□□□ -1.07
PDGFRA-204ENST00000504461 TRBV25-1A0A075B6N4 114 aa8.35□□□□□ -1.07
PDGFRA-204ENST00000504461 TRAV26-2A0A0B4J265 109 aa8.35□□□□□ -1.07
PDGFRA-204ENST00000504461 I3L3M4 83 aa8.35□□□□□ -1.07
PDGFRA-204ENST00000504461 IGHV3-30P01768 117 aa8.35□□□□□ -1.07
PDGFRA-204ENST00000504461 IGHV3-33P01772 117 aa8.35□□□□□ -1.07
PDGFRA-204ENST00000504461 IGHV3-30-3P0DP02 117 aa8.35□□□□□ -1.07
PDGFRA-204ENST00000504461 IGHV3-30-5P0DP03 117 aa8.35□□□□□ -1.07
PDGFRA-204ENST00000504461 COTL1Q14019 142 aa8.35□□□□□ -1.07
PDGFRA-204ENST00000504461 TMEM136Q6ZRR5 245 aa8.35□□□□□ -1.07
PDGFRA-204ENST00000504461 ORMDL3Q8N138 153 aa8.35□□□□□ -1.07
PDGFRA-204ENST00000504461 URGCP-MRPS24S4R325 110 aa8.35□□□□□ -1.07
PDGFRA-204ENST00000504461 RYR1P21817 5038 aa8.34□□□□□ -1.07
PDGFRA-204ENST00000504461 SDHAF1A6NFY7 115 aa8.34□□□□□ -1.07
PDGFRA-204ENST00000504461 IBA57-AS1B1ANH7 110 aa8.34□□□□□ -1.07
PDGFRA-204ENST00000504461 HLA-DQA1P01909 254 aa8.34□□□□□ -1.07
PDGFRA-204ENST00000504461 MT-ND6P03923 174 aa8.34□□□□□ -1.07
PDGFRA-204ENST00000504461 PMCHP20382 165 aa8.34□□□□□ -1.07
PDGFRA-204ENST00000504461 RPL32P62910 135 aaKnown RBP8.34□□□□□ -1.07
PDGFRA-204ENST00000504461 ELOBQ15370 118 aa8.34□□□□□ -1.07
PDGFRA-204ENST00000504461 IQCJQ1A5X6 159 aa8.34□□□□□ -1.07
PDGFRA-204ENST00000504461 Q9HAA7 133 aa8.34□□□□□ -1.07
PDGFRA-204ENST00000504461 SMCO4Q9NRQ5 59 aa8.34□□□□□ -1.07
PDGFRA-204ENST00000504461 IGHV1-24A0A0C4DH33 117 aa8.33□□□□□ -1.08
PDGFRA-204ENST00000504461 TRBV27A0A0K0K1C4 114 aa8.33□□□□□ -1.08
PDGFRA-204ENST00000504461 EPM2AB3EWF7 344 aa8.33□□□□□ -1.08
PDGFRA-204ENST00000504461 H7C423 109 aa8.33□□□□□ -1.08
PDGFRA-204ENST00000504461 GCSHP23434 173 aa8.33□□□□□ -1.08
PDGFRA-204ENST00000504461 POLR2KP53803 58 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-204ENST00000504461 SUMO2P61956 95 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-204ENST00000504461 KIR2DL4Q99706 377 aa8.33□□□□□ -1.08
PDGFRA-204ENST00000504461 A0A087WX48 190 aa8.32□□□□□ -1.08
PDGFRA-204ENST00000504461 TMEM262E9PQX1 116 aa8.32□□□□□ -1.08
PDGFRA-204ENST00000504461 TNFRSF6BO95407 300 aa8.32□□□□□ -1.08
PDGFRA-204ENST00000504461 APCSP02743 223 aa8.32□□□□□ -1.08
PDGFRA-204ENST00000504461 SMAGPQ0VAQ4 97 aa8.32□□□□□ -1.08
PDGFRA-204ENST00000504461 NRACQ8N912 160 aa8.32□□□□□ -1.08
PDGFRA-204ENST00000504461 RPL39LQ96EH5 51 aaKnown RBP8.32□□□□□ -1.08
PDGFRA-204ENST00000504461 TMEM70Q9BUB7 260 aa8.32□□□□□ -1.08
PDGFRA-204ENST00000504461 IGLV5-52A0A0A0MRZ9 124 aa8.31□□□□□ -1.08
PDGFRA-204ENST00000504461 PRSS47A8MTI9 375 aa8.31□□□□□ -1.08
PDGFRA-204ENST00000504461 D6R8Y8 96 aa8.31□□□□□ -1.08
PDGFRA-204ENST00000504461 KRTAP10-1P60331 282 aa8.31□□□□□ -1.08
PDGFRA-204ENST00000504461 PRELID3AQ96N28 172 aa8.31□□□□□ -1.08
PDGFRA-204ENST00000504461 CHCHD5Q9BSY4 110 aa8.31□□□□□ -1.08
PDGFRA-204ENST00000504461 TMEM243Q9BU79 118 aa8.31□□□□□ -1.08
PDGFRA-204ENST00000504461 TM2D2Q9BX73 214 aa8.31□□□□□ -1.08
PDGFRA-204ENST00000504461 HSPG2P98160 4391 aa8.31□□□□□ -1.08
PDGFRA-204ENST00000504461 LRCOL1A6NCL2 159 aa8.3□□□□□ -1.08
PDGFRA-204ENST00000504461 K7EMI3 77 aa8.3□□□□□ -1.08
PDGFRA-204ENST00000504461 UBE2L6O14933 153 aa8.3□□□□□ -1.08
PDGFRA-204ENST00000504461 RPS10P46783 165 aaKnown RBP8.3□□□□□ -1.08
PDGFRA-204ENST00000504461 XGP55808 180 aa8.3□□□□□ -1.08
PDGFRA-204ENST00000504461 NTM-AS1Q6ZSK4 140 aa8.3□□□□□ -1.08
PDGFRA-204ENST00000504461 NIT1Q86X76 327 aa8.3□□□□□ -1.08
PDGFRA-204ENST00000504461 LRP1BQ9NZR2 4599 aa8.29□□□□□ -1.08
PDGFRA-204ENST00000504461 A0A1B0GUV1 79 aa8.29□□□□□ -1.08
PDGFRA-204ENST00000504461 G0S2P27469 103 aa8.29□□□□□ -1.08
PDGFRA-204ENST00000504461 FCER1GP30273 86 aa8.29□□□□□ -1.08
PDGFRA-204ENST00000504461 AMTP48728 403 aa8.29□□□□□ -1.08
PDGFRA-204ENST00000504461 LAGE3Q14657 143 aa8.29□□□□□ -1.08
PDGFRA-204ENST00000504461 NTN5Q8WTR8 489 aaPredicted RBP8.29□□□□□ -1.08
PDGFRA-204ENST00000504461 TMEM18Q96B42 140 aa8.29□□□□□ -1.08
PDGFRA-204ENST00000504461 TRAV8-3A0A0A6YYJ7 113 aa8.28□□□□□ -1.08
PDGFRA-204ENST00000504461 SMKR1H3BMG3 65 aa8.28□□□□□ -1.08
PDGFRA-204ENST00000504461 GAS8-AS1O95177 125 aa8.28□□□□□ -1.08
PDGFRA-204ENST00000504461 RAB5AP20339 215 aa8.28□□□□□ -1.08
PDGFRA-204ENST00000504461 Q8N814 137 aa8.28□□□□□ -1.08
PDGFRA-204ENST00000504461 MAP1LC3AQ9H492 121 aa8.28□□□□□ -1.08
PDGFRA-204ENST00000504461 TRAPPC1Q9Y5R8 145 aa8.28□□□□□ -1.08
PDGFRA-204ENST00000504461 TGIF2-C20orf24A0A0A6YYL0 155 aa8.27□□□□□ -1.09
PDGFRA-204ENST00000504461 S100A1P23297 94 aa8.27□□□□□ -1.09
PDGFRA-204ENST00000504461 Q0VG73 95 aa8.27□□□□□ -1.09
PDGFRA-204ENST00000504461 FABP9Q0Z7S8 132 aa8.27□□□□□ -1.09
PDGFRA-204ENST00000504461 ATRAIDQ6UW56 229 aa8.27□□□□□ -1.09
PDGFRA-204ENST00000504461 NXT2Q9NPJ8 142 aaKnown RBP8.27□□□□□ -1.09
PDGFRA-204ENST00000504461 COX11Q9Y6N1 276 aa8.27□□□□□ -1.09
PDGFRA-204ENST00000504461 ABCA13Q86UQ4 5058 aa8.27□□□□□ -1.09
PDGFRA-204ENST00000504461 INAFM2P0DMQ5 153 aa8.26□□□□□ -1.09
PDGFRA-204ENST00000504461 ZNF25P17030 456 aaPredicted RBP8.26□□□□□ -1.09
PDGFRA-204ENST00000504461 Q8N3U1 123 aa8.26□□□□□ -1.09
PDGFRA-204ENST00000504461 RMI2Q96E14 147 aa8.26□□□□□ -1.09
PDGFRA-204ENST00000504461 SMIM2Q9BVW6 85 aa8.26□□□□□ -1.09
PDGFRA-204ENST00000504461 MRPL18Q9H0U6 180 aaKnown RBP8.26□□□□□ -1.09
PDGFRA-204ENST00000504461 TSHBP01222 138 aa8.25□□□□□ -1.09
PDGFRA-204ENST00000504461 NPYP01303 97 aa8.25□□□□□ -1.09
PDGFRA-204ENST00000504461 SMR3BP02814 79 aaPredicted RBP8.25□□□□□ -1.09
PDGFRA-204ENST00000504461 ESDP10768 282 aa8.25□□□□□ -1.09
PDGFRA-204ENST00000504461 Q5VSD8 79 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms