RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 ERVK-7P63135 1459 aa1.54□□□□□ -2.16
COPS4-203ENST00000504274 EPRSP07814 1512 aaKnown RBP1.54□□□□□ -2.16
COPS4-203ENST00000504274 A0A087WTM6 91 aa1.53□□□□□ -2.16
COPS4-203ENST00000504274 LOC110117498A0A087WWA1 95 aa1.53□□□□□ -2.16
COPS4-203ENST00000504274 HCRTO43612 131 aa1.53□□□□□ -2.16
COPS4-203ENST00000504274 CLTCQ00610 1675 aaKnown RBP1.53□□□□□ -2.16
COPS4-203ENST00000504274 PDCD11Q14690 1871 aaKnown RBP1.53□□□□□ -2.16
COPS4-203ENST00000504274 MPV17LQ2QL34 196 aa1.53□□□□□ -2.16
COPS4-203ENST00000504274 KRTAP21-3Q3LHN1 58 aa1.53□□□□□ -2.16
COPS4-203ENST00000504274 PRRC2BQ5JSZ5 2229 aaKnown RBP1.53□□□□□ -2.16
COPS4-203ENST00000504274 MYO3AQ8NEV4 1616 aa1.53□□□□□ -2.16
COPS4-203ENST00000504274 CYP4F30PQ9H0H9 118 aa1.53□□□□□ -2.16
COPS4-203ENST00000504274 KLK9Q9UKQ9 250 aa1.53□□□□□ -2.16
COPS4-203ENST00000504274 AP4S1Q9Y587 144 aa1.53□□□□□ -2.16
COPS4-203ENST00000504274 ZNF236Q9UL36 1845 aa1.52□□□□□ -2.17
COPS4-203ENST00000504274 POLA1P09884 1462 aaPredicted RBP1.52□□□□□ -2.17
COPS4-203ENST00000504274 NRXN1Q9ULB1 1477 aa1.52□□□□□ -2.17
COPS4-203ENST00000504274 UBE2D3P61077 147 aa1.52□□□□□ -2.17
COPS4-203ENST00000504274 GNG11P61952 73 aa1.52□□□□□ -2.17
COPS4-203ENST00000504274 UBE2D2P62837 147 aa1.52□□□□□ -2.17
COPS4-203ENST00000504274 SEC11AP67812 179 aa1.52□□□□□ -2.17
COPS4-203ENST00000504274 RPL7L1Q6DKI1 246 aaKnown RBP1.52□□□□□ -2.17
COPS4-203ENST00000504274 ZNF818PQ6ZRF7 136 aa1.52□□□□□ -2.17
COPS4-203ENST00000504274 WFDC10AQ9H1F0 79 aa1.52□□□□□ -2.17
COPS4-203ENST00000504274 KIF20BQ96Q89 1820 aa1.52□□□□□ -2.17
COPS4-203ENST00000504274 PPRC1Q5VV67 1664 aaKnown RBP1.51□□□□□ -2.17
COPS4-203ENST00000504274 KIF14Q15058 1648 aa1.51□□□□□ -2.17
COPS4-203ENST00000504274 TRAV22A0A0B4J277 110 aa1.51□□□□□ -2.17
COPS4-203ENST00000504274 H7BZZ5 65 aa1.51□□□□□ -2.17
COPS4-203ENST00000504274 CCL3L1P16619 93 aa1.51□□□□□ -2.17
COPS4-203ENST00000504274 ASIPP42127 132 aa1.51□□□□□ -2.17
COPS4-203ENST00000504274 RPL37AP61513 92 aaKnown RBP1.51□□□□□ -2.17
COPS4-203ENST00000504274 MYOZ3Q8TDC0 251 aa1.51□□□□□ -2.17
COPS4-203ENST00000504274 LRRC37A3O60309 1634 aa1.51□□□□□ -2.17
COPS4-203ENST00000504274 DIP2CQ9Y2E4 1556 aa1.51□□□□□ -2.17
COPS4-203ENST00000504274 MLH3Q9UHC1 1453 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 MAP2P11137 1827 aaKnown RBP1.5□□□□□ -2.17
COPS4-203ENST00000504274 INTS1Q8N201 2190 aaKnown RBP1.5□□□□□ -2.17
COPS4-203ENST00000504274 TRBV7-3A0A075B6L6 115 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 IGKV2-29A2NJV5 120 aaPredicted RBP1.5□□□□□ -2.17
COPS4-203ENST00000504274 A6NIN4 97 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 SFT2D2O95562 160 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 DNAL4O96015 105 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 TRAPPC2P0DI81 140 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 TRAPPC2BP0DI82 140 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 FXYD3Q14802 87 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 LINC00322Q6ZN03 302 aaPredicted RBP1.5□□□□□ -2.17
COPS4-203ENST00000504274 C20orf197Q8N268 126 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 C5orf56Q8N8D9 126 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 FAM167A-AS1Q96KT0 104 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 HMGXB3Q12766 1538 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 CCDC88BA6NC98 1476 aa1.5□□□□□ -2.17
COPS4-203ENST00000504274 BLMP54132 1417 aaPredicted RBP1.49□□□□□ -2.17
COPS4-203ENST00000504274 TMEM131LA2VDJ0 1609 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 TRAV23DV6A0A075B6W5 121 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 ATOX1O00244 68 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 ZNF56Q15929 161 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 SERP2Q8N6R1 65 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 CDC42SE2Q9NRR3 84 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 NDUFA4L2Q9NRX3 87 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 BET1LQ9NYM9 111 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 HIGD1BQ9P298 99 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 CACFD1Q9UGQ2 172 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 MYO7BQ6PIF6 2116 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 TENM1Q9UKZ4 2725 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 MRC1P22897 1456 aa1.49□□□□□ -2.17
COPS4-203ENST00000504274 HELZ2Q9BYK8 2649 aaKnown RBP1.49□□□□□ -2.17
COPS4-203ENST00000504274 LAMA4Q16363 1823 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 TRBV6-7A0A0A0MS04 114 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 IGLC7A0M8Q6 106 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 NAP1L6A6NFF2 107 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 CRYM-AS1A6NIL9 109 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 HIGD1CA8MV81 97 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 SYS1-DBNDD2H3BUS1 97 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 APOC3P02656 99 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 FAUP35544 74 aaKnown RBP1.48□□□□□ -2.17
COPS4-203ENST00000504274 FXYD4P59646 89 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 C10orf128Q5T292 105 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 CYP2G1PQ6ZSU1 146 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 LINC00208Q96KT6 92 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 OBSCN-AS1Q96MR7 158 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 NLRP1Q9C000 1473 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 MAP3K4Q9Y6R4 1608 aa1.48□□□□□ -2.17
COPS4-203ENST00000504274 BTAF1O14981 1849 aa1.47□□□□□ -2.17
COPS4-203ENST00000504274 ADAMTS12P58397 1594 aa1.47□□□□□ -2.17
COPS4-203ENST00000504274 EHBP1L1Q8N3D4 1523 aa1.47□□□□□ -2.17
COPS4-203ENST00000504274 SUPT6HQ7KZ85 1726 aaKnown RBP1.47□□□□□ -2.17
COPS4-203ENST00000504274 ELOF1P60002 83 aaKnown RBP1.47□□□□□ -2.17
COPS4-203ENST00000504274 ALKAL2Q6UX46 152 aa1.47□□□□□ -2.17
COPS4-203ENST00000504274 VMO1Q7Z5L0 202 aa1.47□□□□□ -2.17
COPS4-203ENST00000504274 FAM223AQ8IWN6 122 aa1.47□□□□□ -2.17
COPS4-203ENST00000504274 Q8N6K4 173 aa1.47□□□□□ -2.17
COPS4-203ENST00000504274 FANCAO15360 1455 aa1.47□□□□□ -2.17
COPS4-203ENST00000504274 COL4A1P02462 1669 aa1.47□□□□□ -2.17
COPS4-203ENST00000504274 UACAQ9BZF9 1416 aa1.47□□□□□ -2.17
COPS4-203ENST00000504274 KDM3BQ7LBC6 1761 aa1.47□□□□□ -2.17
COPS4-203ENST00000504274 IFT172Q9UG01 1749 aa1.46□□□□□ -2.18
COPS4-203ENST00000504274 A0A0G2JND7 137 aa1.46□□□□□ -2.18
COPS4-203ENST00000504274 GYPAP02724 150 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms