RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 TRBV6-8A0A0A6YYG3 113 aa5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 MAP1BP46821 2468 aaKnown RBP5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 PSMG3-AS1Q96PY0 264 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 ZDBF2Q9HCK1 2354 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 EBI3Q14213 229 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 CACNA1EQ15878 2313 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 BPY2O14599 106 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 UBE2D1P51668 147 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 CASC2Q6XLA1 102 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 C18orf65Q6ZTR6 163 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 M0R2N4 97 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 PROK1P58294 105 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 ZNF407Q9C0G0 2248 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 IGLV4-3A0A075B6K6 122 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 NDUFC2O95298 119 aa5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 BBC3Q96PG8 261 aaPredicted RBP5.35□□□□□ -1.55
SYNPO2-205ENST00000504178 IGLV2-18A0A075B6J9 118 aa5.34□□□□□ -1.55
SYNPO2-205ENST00000504178 TRBV6-4A0A1B0GX49 114 aa5.34□□□□□ -1.55
SYNPO2-205ENST00000504178 Q6ZPA2 131 aa5.34□□□□□ -1.55
SYNPO2-205ENST00000504178 APC2O95996 2303 aa5.34□□□□□ -1.55
SYNPO2-205ENST00000504178 SLPIP03973 132 aa5.34□□□□□ -1.56
SYNPO2-205ENST00000504178 SPANXB1Q9NS25 103 aaPredicted RBP5.34□□□□□ -1.56
SYNPO2-205ENST00000504178 ICE1Q9Y2F5 2266 aa5.33□□□□□ -1.56
SYNPO2-205ENST00000504178 PRO3102Q9H379 93 aa5.33□□□□□ -1.56
SYNPO2-205ENST00000504178 M0QY20 66 aa5.33□□□□□ -1.56
SYNPO2-205ENST00000504178 PLA2G2AP14555 144 aa5.33□□□□□ -1.56
SYNPO2-205ENST00000504178 DCANP1Q8TF63 244 aa5.33□□□□□ -1.56
SYNPO2-205ENST00000504178 CDKN2A-AS1Q9UH64 79 aa5.33□□□□□ -1.56
SYNPO2-205ENST00000504178 TPRP12270 2363 aaKnown RBP5.33□□□□□ -1.56
SYNPO2-205ENST00000504178 IBA57-AS1B1ANH7 110 aa5.33□□□□□ -1.56
SYNPO2-205ENST00000504178 ZNF22P17026 224 aaPredicted RBP5.33□□□□□ -1.56
SYNPO2-205ENST00000504178 SYCNQ0VAF6 134 aa5.33□□□□□ -1.56
SYNPO2-205ENST00000504178 LY6G6CO95867 125 aa5.33□□□□□ -1.56
SYNPO2-205ENST00000504178 PTH2Q96A98 100 aa5.33□□□□□ -1.56
SYNPO2-205ENST00000504178 DNAH12Q6ZR08 3092 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 TRAV23DV6A0A075B6W5 121 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 CRIP3Q6Q6R5 217 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 J3KT08 172 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 LINC01006Q8NI28 216 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 ZNF706Q9Y5V0 76 aaPredicted RBP5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 SCXQ7RTU7 201 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 ZNF318Q5VUA4 2279 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 PIK3CD-AS1Q5SR53 167 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 ZNF295-AS1Q8N0V1 137 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 LINC00308Q8TCZ7 52 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 RNF185Q96GF1 192 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 CLUHP3Q96NS8 147 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 WFDC10AQ9H1F0 79 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 RTTNQ86VV8 2226 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 XAGE1AQ9HD64 81 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 U3KQK5 164 aa5.32□□□□□ -1.56
SYNPO2-205ENST00000504178 LOC100131303A0A0U1RQF7 123 aa5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 G3V4G9 280 aa5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 CRIP1P50238 77 aa5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 KPRPQ5T749 579 aaPredicted RBP5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 HRCT1Q6UXD1 115 aa5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 MLST8Q9BVC4 326 aa5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 ALPK3Q96L96 1907 aa5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 WFDC10BQ8IUB3 73 aa5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 SPATA12Q7Z6I5 190 aa5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 IGKV2-28A0A075B6P5 120 aa5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 IGKV2D-28P01615 120 aa5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 LINC00643Q86TS7 51 aa5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 Q8N6K4 173 aa5.31□□□□□ -1.56
SYNPO2-205ENST00000504178 A0A0J9YWU9 116 aa5.3□□□□□ -1.56
SYNPO2-205ENST00000504178 LOC107984640A0A0U1RRK4 108 aa5.3□□□□□ -1.56
SYNPO2-205ENST00000504178 ARFGEF3Q5TH69 2177 aa5.3□□□□□ -1.56
SYNPO2-205ENST00000504178 USP17L23D6RBM5 183 aa5.3□□□□□ -1.56
SYNPO2-205ENST00000504178 SDIM1Q6ZPB5 146 aa5.3□□□□□ -1.56
SYNPO2-205ENST00000504178 MUC22E2RYF6 1773 aaPredicted RBP5.3□□□□□ -1.56
SYNPO2-205ENST00000504178 NANOS2P60321 138 aaKnown RBP5.3□□□□□ -1.56
SYNPO2-205ENST00000504178 LELP1Q5T871 98 aa5.3□□□□□ -1.56
SYNPO2-205ENST00000504178 PPDPFQ9H3Y8 114 aa5.3□□□□□ -1.56
SYNPO2-205ENST00000504178 TSHBP01222 138 aa5.3□□□□□ -1.56
SYNPO2-205ENST00000504178 Q8N976 141 aa5.3□□□□□ -1.56
SYNPO2-205ENST00000504178 CEP350Q5VT06 3117 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 CEP192Q8TEP8 1941 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 INTS1Q8N201 2190 aaKnown RBP5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 IGLV4-69A0A075B6H9 119 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 CD164L2Q6UWJ8 174 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 ENHOQ6UWT2 76 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 Q6ZS46 218 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 TEX49A0A1B0GTD5 131 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 M0R378 163 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 IGLV1-40P01703 118 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 UBE2D4Q9Y2X8 147 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 DOCK7Q96N67 2140 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 RBX1P62877 108 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 MBD6Q96DN6 1003 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 DHRS4-AS1Q9P1J3 65 aa5.29□□□□□ -1.56
SYNPO2-205ENST00000504178 PLAC8L1A1L4L8 177 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 PRR9Q5T870 116 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 LINC00959A0A1B0GUT2 108 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 TRIAP1O43715 76 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 IGLV2-11P01706 119 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 UBE2D3P61077 147 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 LINC00526Q96FQ7 95 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 PYGO1Q9Y3Y4 419 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 RPL37AP8A6NKH3 93 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms