RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 ODF3Q96PU9 254 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 TMEM243Q9BU79 118 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 MS4A6AQ9H2W1 248 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 PRO1933Q9H354 126 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 CEP295Q9C0D2 2601 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 FRYQ5TBA9 3013 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 RP1L1Q8IWN7 2480 aaPredicted RBP3.52□□□□□ -1.85
NEDD4-203ENST00000502612 IGHV3-49A0A0A0MS15 119 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 TRAV2A0A0B4J234 112 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 IGHV1-24A0A0C4DH33 117 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 D6R8Y8 96 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 SYS1-DBNDD2H3BUS1 97 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 J3QKU1 62 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 HBDP02042 147 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 SMIM17P0DL12 118 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 SPATA45Q537H7 98 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 UNQ9165/PRO28630Q6UXU0 137 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 SPATA12Q7Z6I5 190 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 AMN1Q8IY45 258 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 Q8N2B8 174 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 FAM19A2Q8N3H0 131 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 MRAP2Q96G30 205 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 C14orf144Q96I85 54 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 PMCHL2Q9BQD1 86 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 C2orf88Q9BSF0 95 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 ST20Q9HBF5 79 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 PHLDA3Q9Y5J5 127 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 TLN1Q9Y490 2541 aaKnown RBP3.52□□□□□ -1.85
NEDD4-203ENST00000502612 ASPMQ8IZT6 3477 aa3.52□□□□□ -1.85
NEDD4-203ENST00000502612 LOC400499M0QZD8 3231 aa3.51□□□□□ -1.85
NEDD4-203ENST00000502612 SPENQ96T58 3664 aaKnown RBP3.51□□□□□ -1.85
NEDD4-203ENST00000502612 PIEZO2Q9H5I5 2752 aa3.51□□□□□ -1.85
NEDD4-203ENST00000502612 IGHV3OR16-9A0A0B4J2B5 98 aa3.51□□□□□ -1.85
NEDD4-203ENST00000502612 OR4C46A6NHA9 309 aa3.51□□□□□ -1.85
NEDD4-203ENST00000502612 C2orf70A6NJV1 201 aa3.51□□□□□ -1.85
NEDD4-203ENST00000502612 LINC01619G3V211 115 aa3.51□□□□□ -1.85
NEDD4-203ENST00000502612 HLA-DMBP28068 263 aa3.51□□□□□ -1.85
NEDD4-203ENST00000502612 ZNF80P51504 273 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-203ENST00000502612 CMC4P56277 68 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-203ENST00000502612 MRPL51Q4U2R6 128 aaKnown RBP3.51□□□□□ -1.85
NEDD4-203ENST00000502612 DEFB125Q8N687 156 aa3.51□□□□□ -1.85
NEDD4-203ENST00000502612 MYOZ3Q8TDC0 251 aa3.51□□□□□ -1.85
NEDD4-203ENST00000502612 AP1S3Q96PC3 154 aa3.51□□□□□ -1.85
NEDD4-203ENST00000502612 DPH3P1Q9H4G8 78 aa3.51□□□□□ -1.85
NEDD4-203ENST00000502612 ACACBO00763 2458 aa3.51□□□□□ -1.85
NEDD4-203ENST00000502612 MAP1BP46821 2468 aaKnown RBP3.5□□□□□ -1.85
NEDD4-203ENST00000502612 DIDO1Q9BTC0 2240 aaKnown RBP3.5□□□□□ -1.85
NEDD4-203ENST00000502612 TMEM213A2RRL7 107 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 LINC01546A6NGU7 62 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 M0R381 172 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 TCAPO15273 167 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 TRBV12-3P01733 135 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 ZNF688P0C7X2 276 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 FCER1GP30273 86 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 IFI27P40305 119 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-203ENST00000502612 LGALS9BQ3B8N2 356 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 LGALS9CQ6DKI2 356 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 FOXI2Q6ZQN5 318 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 ZFAND2AQ8N6M9 145 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 Q8N8P6 123 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 OR2K2Q8NGT1 345 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 C4orf3Q8WVX3 66 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 FAM19A4Q96LR4 140 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 C20orf78Q9BR46 151 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 MRPS16Q9Y3D3 137 aaKnown RBP3.5□□□□□ -1.85
NEDD4-203ENST00000502612 CELSR3Q9NYQ7 3312 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 ICE1Q9Y2F5 2266 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 BSNQ9UPA5 3926 aa3.5□□□□□ -1.85
NEDD4-203ENST00000502612 MGAQ8IWI9 3026 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 IGF2RP11717 2491 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 DCHS1Q96JQ0 3298 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 IGKV3-7A0A075B6H7 116 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 LOC389332A0A1B0GUA5 103 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 C7orf71A4D174 169 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 IGLC3P0DOY3 106 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 RNASE4P34096 147 aaKnown RBP3.49□□□□□ -1.85
NEDD4-203ENST00000502612 TDRG1Q3Y452 100 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 COL5A1-AS1Q5SY13 56 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 LINC01545Q5VT33 79 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 SLC25A34Q6PIV7 304 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 DYNLRB2Q8TF09 96 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 ZNF418Q8TF45 676 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-203ENST00000502612 DCANP1Q8TF63 244 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 IFI27L1Q96BM0 104 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 PKDREJQ9NTG1 2253 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 SPTA1P02549 2419 aa3.49□□□□□ -1.85
NEDD4-203ENST00000502612 PRRC2CQ9Y520 2896 aaKnown RBP3.49□□□□□ -1.85
NEDD4-203ENST00000502612 TNCP24821 2201 aa3.48□□□□□ -1.85
NEDD4-203ENST00000502612 CFAP47Q6ZTR5 3102 aa3.48□□□□□ -1.85
NEDD4-203ENST00000502612 A0A0J9YX75 114 aa3.48□□□□□ -1.85
NEDD4-203ENST00000502612 H3BVH4 76 aa3.48□□□□□ -1.85
NEDD4-203ENST00000502612 NPYP01303 97 aa3.48□□□□□ -1.85
NEDD4-203ENST00000502612 C18orf15Q96N68 181 aa3.48□□□□□ -1.85
NEDD4-203ENST00000502612 ZMAT5Q9UDW3 170 aaKnown RBP3.48□□□□□ -1.85
NEDD4-203ENST00000502612 TIMM8BQ9Y5J9 83 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-203ENST00000502612 CACNA1AO00555 2505 aa3.47□□□□□ -1.85
NEDD4-203ENST00000502612 CHD8Q9HCK8 2581 aa3.47□□□□□ -1.85
NEDD4-203ENST00000502612 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
NEDD4-203ENST00000502612 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-203ENST00000502612 NCR2O95944 276 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms