RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 RPL24P83731 157 aaKnown RBP12.03□□□□□ -0.48
VCAN-204ENST00000502527 STHQ8IWL8 128 aa12.03□□□□□ -0.48
VCAN-204ENST00000502527 A0A1W2PRX2 142 aa12.02□□□□□ -0.48
VCAN-204ENST00000502527 RS1O15537 224 aa12.02□□□□□ -0.48
VCAN-204ENST00000502527 XCL2Q9UBD3 114 aa12.02□□□□□ -0.48
VCAN-204ENST00000502527 SPANXA1Q9NS26 97 aa12.02□□□□□ -0.49
VCAN-204ENST00000502527 MRPS36P82909 103 aaKnown RBP12.01□□□□□ -0.49
VCAN-204ENST00000502527 GAGE13Q4V321 117 aa12.01□□□□□ -0.49
VCAN-204ENST00000502527 C11orf44Q8N8P7 122 aa12.01□□□□□ -0.49
VCAN-204ENST00000502527 FAM104AQ969W3 186 aa12.01□□□□□ -0.49
VCAN-204ENST00000502527 ESM1Q9NQ30 184 aa12.01□□□□□ -0.49
VCAN-204ENST00000502527 Q9UF83 564 aa12.01□□□□□ -0.49
VCAN-204ENST00000502527 APOMO95445 188 aa12.01□□□□□ -0.49
VCAN-204ENST00000502527 NDUFA11Q86Y39 141 aa12.01□□□□□ -0.49
VCAN-204ENST00000502527 CHCHD7Q9BUK0 85 aa12.01□□□□□ -0.49
VCAN-204ENST00000502527 TSPAN13O95857 204 aa12□□□□□ -0.49
VCAN-204ENST00000502527 WFDC2Q14508 124 aa12□□□□□ -0.49
VCAN-204ENST00000502527 EPG5Q9HCE0 2579 aa12□□□□□ -0.49
VCAN-204ENST00000502527 ITPR3Q14573 2671 aa12□□□□□ -0.49
VCAN-204ENST00000502527 IGHV3-64A0A075B6Q5 118 aa11.99□□□□□ -0.49
VCAN-204ENST00000502527 TEX48A0A1B0GUV7 120 aa11.99□□□□□ -0.49
VCAN-204ENST00000502527 CEMP1Q6PRD7 247 aaPredicted RBP11.99□□□□□ -0.49
VCAN-204ENST00000502527 AZU1P20160 251 aa11.99□□□□□ -0.49
VCAN-204ENST00000502527 COTL1Q14019 142 aa11.99□□□□□ -0.49
VCAN-204ENST00000502527 UBE2D4Q9Y2X8 147 aa11.99□□□□□ -0.49
VCAN-204ENST00000502527 CFC1BP0CG36 223 aa11.98□□□□□ -0.49
VCAN-204ENST00000502527 CFC1P0CG37 223 aa11.98□□□□□ -0.49
VCAN-204ENST00000502527 LYRM7Q5U5X0 104 aa11.98□□□□□ -0.49
VCAN-204ENST00000502527 C1orf158Q8N1D5 194 aa11.98□□□□□ -0.49
VCAN-204ENST00000502527 TIMM21Q9BVV7 248 aa11.98□□□□□ -0.49
VCAN-204ENST00000502527 TLN2Q9Y4G6 2542 aa11.98□□□□□ -0.49
VCAN-204ENST00000502527 CITED2Q99967 270 aaPredicted RBP11.98□□□□□ -0.49
VCAN-204ENST00000502527 TSSC4Q9Y5U2 329 aaPredicted RBP11.98□□□□□ -0.49
VCAN-204ENST00000502527 IGHV3OR16-12A0A075B7B8 117 aa11.97□□□□□ -0.49
VCAN-204ENST00000502527 TINCRA0A1B0GVN0 87 aa11.97□□□□□ -0.49
VCAN-204ENST00000502527 IGHV3-30-3P0DP02 117 aa11.97□□□□□ -0.49
VCAN-204ENST00000502527 PRO0461Q9UI25 63 aa11.97□□□□□ -0.49
VCAN-204ENST00000502527 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.96□□□□□ -0.49
VCAN-204ENST00000502527 LOC107984156A0A0G2JMH3 177 aa11.96□□□□□ -0.49
VCAN-204ENST00000502527 IGKV2-29A2NJV5 120 aaPredicted RBP11.96□□□□□ -0.49
VCAN-204ENST00000502527 TMEM238C9JI98 176 aa11.96□□□□□ -0.49
VCAN-204ENST00000502527 UBE2D3P61077 147 aa11.96□□□□□ -0.49
VCAN-204ENST00000502527 UBE2D2P62837 147 aa11.96□□□□□ -0.49
VCAN-204ENST00000502527 ARL17AQ8IVW1 177 aa11.96□□□□□ -0.49
VCAN-204ENST00000502527 IGHV3-38A0A0C4DH36 116 aa11.96□□□□□ -0.5
VCAN-204ENST00000502527 CMC4P56277 68 aaPredicted RBP11.96□□□□□ -0.5
VCAN-204ENST00000502527 C10orf126Q8N4M7 172 aa11.96□□□□□ -0.5
VCAN-204ENST00000502527 IL17DQ8TAD2 202 aa11.96□□□□□ -0.5
VCAN-204ENST00000502527 PRO1854Q9UHT4 67 aa11.96□□□□□ -0.5
VCAN-204ENST00000502527 RNASE13Q5GAN3 156 aaKnown RBP11.95□□□□□ -0.5
VCAN-204ENST00000502527 C16orf95Q9H693 158 aa11.95□□□□□ -0.5
VCAN-204ENST00000502527 YAE1D1Q9NRH1 226 aa11.95□□□□□ -0.5
VCAN-204ENST00000502527 NACAE9PAV3 2078 aa11.95□□□□□ -0.5
VCAN-204ENST00000502527 TRGV1A0A0A0MS02 117 aa11.95□□□□□ -0.5
VCAN-204ENST00000502527 IGHV1-58A0A0C4DH39 117 aa11.95□□□□□ -0.5
VCAN-204ENST00000502527 J3QR89 54 aa11.95□□□□□ -0.5
VCAN-204ENST00000502527 LINC01006Q8NI28 216 aa11.95□□□□□ -0.5
VCAN-204ENST00000502527 A0A0J9YXY3 114 aa11.94□□□□□ -0.5
VCAN-204ENST00000502527 RNASE1P07998 156 aaKnown RBP11.94□□□□□ -0.5
VCAN-204ENST00000502527 ETDBQ3ZM63 59 aa11.94□□□□□ -0.5
VCAN-204ENST00000502527 HIST2H2BCQ6DN03 193 aa11.94□□□□□ -0.5
VCAN-204ENST00000502527 SONP18583 2426 aaKnown RBP11.93□□□□□ -0.5
VCAN-204ENST00000502527 A4D1N5 150 aa11.93□□□□□ -0.5
VCAN-204ENST00000502527 PSMB2P49721 201 aa11.93□□□□□ -0.5
VCAN-204ENST00000502527 KRTAP1-1Q07627 177 aa11.93□□□□□ -0.5
VCAN-204ENST00000502527 Q6ZUT4 128 aa11.93□□□□□ -0.5
VCAN-204ENST00000502527 CHD6Q8TD26 2715 aa11.93□□□□□ -0.5
VCAN-204ENST00000502527 SFTA2Q6UW10 78 aa11.93□□□□□ -0.5
VCAN-204ENST00000502527 TRAV8-3A0A0A6YYJ7 113 aa11.92□□□□□ -0.5
VCAN-204ENST00000502527 SH2D6Q7Z4S9 175 aa11.92□□□□□ -0.5
VCAN-204ENST00000502527 MUSTN1Q8IVN3 82 aa11.92□□□□□ -0.5
VCAN-204ENST00000502527 MTURNQ8N3F0 131 aa11.92□□□□□ -0.5
VCAN-204ENST00000502527 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
VCAN-204ENST00000502527 VSIG2Q96IQ7 327 aa11.92□□□□□ -0.5
VCAN-204ENST00000502527 GEMIN7Q9H840 131 aaKnown RBP11.92□□□□□ -0.5
VCAN-204ENST00000502527 TRBV20-1A0A075B6N2 111 aa11.91□□□□□ -0.5
VCAN-204ENST00000502527 OXLD1Q5BKU9 147 aa11.91□□□□□ -0.5
VCAN-204ENST00000502527 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.91□□□□□ -0.5
VCAN-204ENST00000502527 A0A0B4J2C4 111 aa11.91□□□□□ -0.5
VCAN-204ENST00000502527 TRBV10-1A0A0K0K1A3 114 aa11.91□□□□□ -0.5
VCAN-204ENST00000502527 DGAT2L7PQ6IED9 249 aa11.91□□□□□ -0.5
VCAN-204ENST00000502527 ZNF469Q96JG9 3925 aaPredicted RBP11.91□□□□□ -0.5
VCAN-204ENST00000502527 AKAP9Q99996 3911 aa11.91□□□□□ -0.5
VCAN-204ENST00000502527 NDUFA12Q9UI09 145 aa11.91□□□□□ -0.5
VCAN-204ENST00000502527 FLNAP21333 2647 aaKnown RBP11.91□□□□□ -0.5
VCAN-204ENST00000502527 RPL36AP83881 106 aaKnown RBP11.9□□□□□ -0.5
VCAN-204ENST00000502527 RPL36ALQ969Q0 106 aaKnown RBP11.9□□□□□ -0.5
VCAN-204ENST00000502527 TRAV4A0A0B4J268 109 aa11.9□□□□□ -0.51
VCAN-204ENST00000502527 ADARB2-AS1A8MUL3 147 aa11.9□□□□□ -0.51
VCAN-204ENST00000502527 Q6ZTI0 123 aa11.9□□□□□ -0.51
VCAN-204ENST00000502527 K7EQD1 137 aa11.89□□□□□ -0.51
VCAN-204ENST00000502527 SPINK8P0C7L1 97 aa11.89□□□□□ -0.51
VCAN-204ENST00000502527 TIRAPP58753 221 aa11.89□□□□□ -0.51
VCAN-204ENST00000502527 CCDC168Q8NDH2 2452 aa11.89□□□□□ -0.51
VCAN-204ENST00000502527 SCGB1C2P0DMR2 95 aa11.88□□□□□ -0.51
VCAN-204ENST00000502527 LITAFQ99732 161 aa11.88□□□□□ -0.51
VCAN-204ENST00000502527 FAM110AQ9BQ89 295 aa11.88□□□□□ -0.51
VCAN-204ENST00000502527 TCL1BO95988 128 aa11.88□□□□□ -0.51
VCAN-204ENST00000502527 IGHV3-33P01772 117 aa11.88□□□□□ -0.51
VCAN-204ENST00000502527 DAZ2Q13117 558 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms