RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 SLC25A29Q8N8R3 303 aa12.98□□□□□ -0.33
LINC00535-201ENST00000501400 PHLDA1Q8WV24 401 aaPredicted RBP12.98□□□□□ -0.33
LINC00535-201ENST00000501400 CHCHD7Q9BUK0 85 aa12.98□□□□□ -0.33
LINC00535-201ENST00000501400 TRGV2A0A075B6R0 118 aa12.97□□□□□ -0.33
LINC00535-201ENST00000501400 EMP1P54849 157 aa12.97□□□□□ -0.33
LINC00535-201ENST00000501400 C2orf91Q6ZV80 131 aa12.97□□□□□ -0.33
LINC00535-201ENST00000501400 OPRPNQ99935 248 aaPredicted RBP12.97□□□□□ -0.33
LINC00535-201ENST00000501400 IGLV4-69A0A075B6H9 119 aa12.96□□□□□ -0.33
LINC00535-201ENST00000501400 TRBV10-1A0A0K0K1A3 114 aa12.96□□□□□ -0.33
LINC00535-201ENST00000501400 PMVKQ15126 192 aa12.96□□□□□ -0.33
LINC00535-201ENST00000501400 LBHQ53QV2 105 aaPredicted RBP12.96□□□□□ -0.33
LINC00535-201ENST00000501400 PCP2Q8IVA1 136 aa12.96□□□□□ -0.33
LINC00535-201ENST00000501400 C3orf56Q8N813 242 aa12.96□□□□□ -0.33
LINC00535-201ENST00000501400 NMUP48645 174 aa12.96□□□□□ -0.34
LINC00535-201ENST00000501400 DEFB135Q30KP9 77 aa12.96□□□□□ -0.34
LINC00535-201ENST00000501400 BOD1L2Q8IYS8 172 aa12.96□□□□□ -0.34
LINC00535-201ENST00000501400 LINC00612Q8N6U2 182 aa12.96□□□□□ -0.34
LINC00535-201ENST00000501400 ZNRF2Q8NHG8 242 aa12.96□□□□□ -0.34
LINC00535-201ENST00000501400 FAM104AQ969W3 186 aa12.96□□□□□ -0.34
LINC00535-201ENST00000501400 CST9LQ9H4G1 147 aa12.96□□□□□ -0.34
LINC00535-201ENST00000501400 TRBV7-3A0A075B6L6 115 aa12.95□□□□□ -0.34
LINC00535-201ENST00000501400 APOC4P55056 127 aa12.95□□□□□ -0.34
LINC00535-201ENST00000501400 OXLD1Q5BKU9 147 aa12.95□□□□□ -0.34
LINC00535-201ENST00000501400 PKD1L1Q8TDX9 2849 aa12.95□□□□□ -0.34
LINC00535-201ENST00000501400 IGLV4-3A0A075B6K6 122 aa12.94□□□□□ -0.34
LINC00535-201ENST00000501400 SHISA2Q6UWI4 295 aa12.94□□□□□ -0.34
LINC00535-201ENST00000501400 SMIM9A6NGZ8 99 aa12.94□□□□□ -0.34
LINC00535-201ENST00000501400 IGHV4-30-4P0DP06 118 aa12.94□□□□□ -0.34
LINC00535-201ENST00000501400 COTL1Q14019 142 aa12.93□□□□□ -0.34
LINC00535-201ENST00000501400 TTTY13Q9BZ97 58 aa12.93□□□□□ -0.34
LINC00535-201ENST00000501400 PYGO1Q9Y3Y4 419 aa12.93□□□□□ -0.34
LINC00535-201ENST00000501400 C11orf86A6NJI1 115 aa12.92□□□□□ -0.34
LINC00535-201ENST00000501400 CIDEAO60543 219 aa12.92□□□□□ -0.34
LINC00535-201ENST00000501400 KRTAP10-11P60412 298 aa12.92□□□□□ -0.34
LINC00535-201ENST00000501400 UBE2D3P61077 147 aa12.92□□□□□ -0.34
LINC00535-201ENST00000501400 UBE2D2P62837 147 aa12.92□□□□□ -0.34
LINC00535-201ENST00000501400 RPL36AP83881 106 aaKnown RBP12.92□□□□□ -0.34
LINC00535-201ENST00000501400 BATFQ16520 125 aa12.92□□□□□ -0.34
LINC00535-201ENST00000501400 RPL36ALQ969Q0 106 aaKnown RBP12.92□□□□□ -0.34
LINC00535-201ENST00000501400 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.92□□□□□ -0.34
LINC00535-201ENST00000501400 TRBV6-4A0A1B0GX49 114 aa12.92□□□□□ -0.34
LINC00535-201ENST00000501400 IGKV2-29A2NJV5 120 aaPredicted RBP12.92□□□□□ -0.34
LINC00535-201ENST00000501400 DLEU1O43261 78 aa12.92□□□□□ -0.34
LINC00535-201ENST00000501400 FHL2Q14192 279 aa12.92□□□□□ -0.34
LINC00535-201ENST00000501400 ZMAT5Q9UDW3 170 aaKnown RBP12.92□□□□□ -0.34
LINC00535-201ENST00000501400 LOC100131303A0A0U1RQF7 123 aa12.91□□□□□ -0.34
LINC00535-201ENST00000501400 GAGE12JA6NER3 117 aa12.91□□□□□ -0.34
LINC00535-201ENST00000501400 HINT1P49773 126 aaPredicted RBP12.91□□□□□ -0.34
LINC00535-201ENST00000501400 GAGE1Q13065 139 aa12.91□□□□□ -0.34
LINC00535-201ENST00000501400 GAGE4Q13068 117 aa12.91□□□□□ -0.34
LINC00535-201ENST00000501400 GAGE5Q13069 117 aa12.91□□□□□ -0.34
LINC00535-201ENST00000501400 GAGE13Q4V321 117 aa12.91□□□□□ -0.34
LINC00535-201ENST00000501400 CEMP1Q6PRD7 247 aaPredicted RBP12.91□□□□□ -0.34
LINC00535-201ENST00000501400 C12orf54Q6X4T0 127 aa12.91□□□□□ -0.34
LINC00535-201ENST00000501400 UBE2D4Q9Y2X8 147 aa12.91□□□□□ -0.34
LINC00535-201ENST00000501400 DEFB130BP0DP73 79 aa12.9□□□□□ -0.35
LINC00535-201ENST00000501400 DEFB130AP0DP74 79 aa12.9□□□□□ -0.35
LINC00535-201ENST00000501400 NTM-AS1Q6ZSK4 140 aa12.9□□□□□ -0.35
LINC00535-201ENST00000501400 COL6A5A8TX70 2615 aa12.89□□□□□ -0.35
LINC00535-201ENST00000501400 TRGV4A0A0C4DH28 118 aa12.89□□□□□ -0.35
LINC00535-201ENST00000501400 A0A1B0GV90 55 aa12.89□□□□□ -0.35
LINC00535-201ENST00000501400 EGFEM1PQ0D2K5 195 aa12.89□□□□□ -0.35
LINC00535-201ENST00000501400 OR11H2Q8NH07 326 aa12.89□□□□□ -0.35
LINC00535-201ENST00000501400 DNAH3Q8TD57 4116 aa12.89□□□□□ -0.35
LINC00535-201ENST00000501400 MPV17L2Q567V2 206 aa12.88□□□□□ -0.35
LINC00535-201ENST00000501400 DAZ4Q86SG3 579 aaKnown RBP12.88□□□□□ -0.35
LINC00535-201ENST00000501400 AMELXQ99217 191 aa12.88□□□□□ -0.35
LINC00535-201ENST00000501400 DAZ3Q9NR90 486 aaKnown RBP12.88□□□□□ -0.35
LINC00535-201ENST00000501400 IGHV4-28A0A0C4DH34 117 aa12.88□□□□□ -0.35
LINC00535-201ENST00000501400 SPANXA1Q9NS26 97 aa12.88□□□□□ -0.35
LINC00535-201ENST00000501400 LINC00694P0DN24 101 aa12.87□□□□□ -0.35
LINC00535-201ENST00000501400 FAM222AQ5U5X8 452 aa12.87□□□□□ -0.35
LINC00535-201ENST00000501400 NFE4Q86UQ8 179 aa12.87□□□□□ -0.35
LINC00535-201ENST00000501400 Q8NAQ8 132 aa12.87□□□□□ -0.35
LINC00535-201ENST00000501400 DEFB4AO15263 64 aa12.86□□□□□ -0.35
LINC00535-201ENST00000501400 NPSP0C0P6 89 aa12.86□□□□□ -0.35
LINC00535-201ENST00000501400 PAPPA-AS1Q5QFB9 102 aa12.86□□□□□ -0.35
LINC00535-201ENST00000501400 Q6ZUT4 128 aa12.86□□□□□ -0.35
LINC00535-201ENST00000501400 ANK2Q01484 3957 aa12.86□□□□□ -0.35
LINC00535-201ENST00000501400 E9PLD3 99 aa12.86□□□□□ -0.35
LINC00535-201ENST00000501400 RNASE13Q5GAN3 156 aaKnown RBP12.86□□□□□ -0.35
LINC00535-201ENST00000501400 MAPKAPK5-AS1Q8N8E1 139 aa12.86□□□□□ -0.35
LINC00535-201ENST00000501400 VCX2Q9H322 139 aa12.86□□□□□ -0.35
LINC00535-201ENST00000501400 LYRM9A8MSI8 78 aa12.85□□□□□ -0.35
LINC00535-201ENST00000501400 SIVA1O15304 175 aa12.85□□□□□ -0.35
LINC00535-201ENST00000501400 CRYBA4P53673 196 aa12.85□□□□□ -0.35
LINC00535-201ENST00000501400 BVES-AS1Q5T3Y7 98 aa12.85□□□□□ -0.35
LINC00535-201ENST00000501400 SBSPONQ8IVN8 264 aa12.85□□□□□ -0.35
LINC00535-201ENST00000501400 RNF183Q96D59 192 aa12.85□□□□□ -0.35
LINC00535-201ENST00000501400 CHAC1Q9BUX1 264 aa12.85□□□□□ -0.35
LINC00535-201ENST00000501400 TRAV8-6A0A0B4J262 113 aa12.84□□□□□ -0.35
LINC00535-201ENST00000501400 PRADC1Q9BSG0 188 aa12.84□□□□□ -0.35
LINC00535-201ENST00000501400 A0A0J9YXV3 536 aa12.83□□□□□ -0.36
LINC00535-201ENST00000501400 COL5A1-AS1Q5SY13 56 aa12.83□□□□□ -0.36
LINC00535-201ENST00000501400 TIMM21Q9BVV7 248 aa12.83□□□□□ -0.36
LINC00535-201ENST00000501400 TRBV25-1A0A075B6N4 114 aa12.82□□□□□ -0.36
LINC00535-201ENST00000501400 MIFP14174 115 aa12.82□□□□□ -0.36
LINC00535-201ENST00000501400 TMEM97Q5BJF2 176 aa12.82□□□□□ -0.36
LINC00535-201ENST00000501400 GTSF1LQ9H1H1 148 aa12.82□□□□□ -0.36
LINC00535-201ENST00000501400 CELA1Q9UNI1 258 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms