RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 ZFP2Q6ZN57 461 aa18.67■□□□□ 0.58
HOXB3-212ENST00000498678 OR11H2Q8NH07 326 aa18.67■□□□□ 0.58
HOXB3-212ENST00000498678 IFI27L1Q96BM0 104 aa18.67■□□□□ 0.58
HOXB3-212ENST00000498678 PGPEP1Q9NXJ5 209 aa18.67■□□□□ 0.58
HOXB3-212ENST00000498678 TRBV27A0A0K0K1C4 114 aa18.66■□□□□ 0.58
HOXB3-212ENST00000498678 SPATA25Q9BR10 227 aa18.66■□□□□ 0.58
HOXB3-212ENST00000498678 GAGE12HA6NDE8 117 aa18.66■□□□□ 0.58
HOXB3-212ENST00000498678 H0Y8G0 127 aa18.66■□□□□ 0.58
HOXB3-212ENST00000498678 TSPAN13O95857 204 aa18.66■□□□□ 0.58
HOXB3-212ENST00000498678 P0DMU3 169 aa18.66■□□□□ 0.58
HOXB3-212ENST00000498678 FAM231AP0DMU4 169 aa18.66■□□□□ 0.58
HOXB3-212ENST00000498678 FAM231CP0DMU5 169 aa18.66■□□□□ 0.58
HOXB3-212ENST00000498678 APOC4P55056 127 aa18.66■□□□□ 0.58
HOXB3-212ENST00000498678 C18orf15Q96N68 181 aa18.66■□□□□ 0.58
HOXB3-212ENST00000498678 A6NDN8 102 aa18.65■□□□□ 0.58
HOXB3-212ENST00000498678 KRTAP10-11P60412 298 aa18.65■□□□□ 0.58
HOXB3-212ENST00000498678 IGHV3-53P01767 116 aa18.65■□□□□ 0.58
HOXB3-212ENST00000498678 X6R8D5 127 aa18.65■□□□□ 0.58
HOXB3-212ENST00000498678 IGHV4-30-4P0DP06 118 aa18.64■□□□□ 0.57
HOXB3-212ENST00000498678 EGFEM1PQ0D2K5 195 aa18.64■□□□□ 0.57
HOXB3-212ENST00000498678 LINC01545Q5VT33 79 aa18.63■□□□□ 0.57
HOXB3-212ENST00000498678 DEFB104AQ8WTQ1 72 aa18.63■□□□□ 0.57
HOXB3-212ENST00000498678 KIR2DL4Q99706 377 aa18.63■□□□□ 0.57
HOXB3-212ENST00000498678 Q9UF83 564 aa18.63■□□□□ 0.57
HOXB3-212ENST00000498678 GEMIN7Q9H840 131 aaKnown RBP18.62■□□□□ 0.57
HOXB3-212ENST00000498678 TRAV4A0A0B4J268 109 aa18.62■□□□□ 0.57
HOXB3-212ENST00000498678 COL6A5A8TX70 2615 aa18.61■□□□□ 0.57
HOXB3-212ENST00000498678 SMIM9A6NGZ8 99 aa18.61■□□□□ 0.57
HOXB3-212ENST00000498678 TMEM97Q5BJF2 176 aa18.61■□□□□ 0.57
HOXB3-212ENST00000498678 TOMM6Q96B49 74 aa18.61■□□□□ 0.57
HOXB3-212ENST00000498678 GAGE7O76087 117 aa18.61■□□□□ 0.57
HOXB3-212ENST00000498678 GAGE12FP0CL80 117 aa18.61■□□□□ 0.57
HOXB3-212ENST00000498678 GAGE12GP0CL81 117 aa18.61■□□□□ 0.57
HOXB3-212ENST00000498678 GAGE12IP0CL82 117 aa18.61■□□□□ 0.57
HOXB3-212ENST00000498678 DEFB135Q30KP9 77 aa18.61■□□□□ 0.57
HOXB3-212ENST00000498678 EMP1P54849 157 aa18.59■□□□□ 0.57
HOXB3-212ENST00000498678 TNFRSF18Q9Y5U5 241 aa18.59■□□□□ 0.57
HOXB3-212ENST00000498678 C2orf66Q6UXQ4 117 aa18.59■□□□□ 0.57
HOXB3-212ENST00000498678 NEXN-AS1Q8NBZ9 246 aa18.59■□□□□ 0.57
HOXB3-212ENST00000498678 ATP5LO75964 103 aa18.58■□□□□ 0.57
HOXB3-212ENST00000498678 TRGV2A0A075B6R0 118 aa18.58■□□□□ 0.56
HOXB3-212ENST00000498678 I3L3M4 83 aa18.58■□□□□ 0.56
HOXB3-212ENST00000498678 TSHBP01222 138 aa18.57■□□□□ 0.56
HOXB3-212ENST00000498678 LGALS9CQ6DKI2 356 aa18.57■□□□□ 0.56
HOXB3-212ENST00000498678 DNAJC30Q96LL9 226 aa18.56■□□□□ 0.56
HOXB3-212ENST00000498678 COX8AP10176 69 aa18.55■□□□□ 0.56
HOXB3-212ENST00000498678 RPL24P83731 157 aaKnown RBP18.55■□□□□ 0.56
HOXB3-212ENST00000498678 SCGB3A1Q96QR1 104 aa18.55■□□□□ 0.56
HOXB3-212ENST00000498678 TEX48A0A1B0GUV7 120 aa18.54■□□□□ 0.56
HOXB3-212ENST00000498678 H3BUT2 72 aa18.54■□□□□ 0.56
HOXB3-212ENST00000498678 PRSS1P07477 247 aa18.54■□□□□ 0.56
HOXB3-212ENST00000498678 SPCS1Q9Y6A9 102 aa18.54■□□□□ 0.56
HOXB3-212ENST00000498678 A0A1W2PPM0 123 aa18.54■□□□□ 0.56
HOXB3-212ENST00000498678 RHOHQ15669 191 aa18.54■□□□□ 0.56
HOXB3-212ENST00000498678 CYSLTR1Q9Y271 337 aa18.54■□□□□ 0.56
HOXB3-212ENST00000498678 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.53■□□□□ 0.56
HOXB3-212ENST00000498678 CMYA5Q8N3K9 4069 aa18.53■□□□□ 0.56
HOXB3-212ENST00000498678 LINC00612Q8N6U2 182 aa18.52■□□□□ 0.56
HOXB3-212ENST00000498678 TP53TG1Q9Y2A0 90 aa18.52■□□□□ 0.56
HOXB3-212ENST00000498678 hDV102S1A0JD36 115 aa18.51■□□□□ 0.55
HOXB3-212ENST00000498678 C2orf91Q6ZV80 131 aa18.51■□□□□ 0.55
HOXB3-212ENST00000498678 PKD1L1Q8TDX9 2849 aa18.51■□□□□ 0.55
HOXB3-212ENST00000498678 K7EQD1 137 aa18.51■□□□□ 0.55
HOXB3-212ENST00000498678 FABP2P12104 132 aa18.51■□□□□ 0.55
HOXB3-212ENST00000498678 RPL39P62891 51 aaKnown RBP18.51■□□□□ 0.55
HOXB3-212ENST00000498678 SLC25A29Q8N8R3 303 aa18.51■□□□□ 0.55
HOXB3-212ENST00000498678 RNF183Q96D59 192 aa18.51■□□□□ 0.55
HOXB3-212ENST00000498678 A8MZ25 164 aa18.5■□□□□ 0.55
HOXB3-212ENST00000498678 DKK2Q9UBU2 259 aa18.5■□□□□ 0.55
HOXB3-212ENST00000498678 LINC01549A6NIU2 74 aa18.49■□□□□ 0.55
HOXB3-212ENST00000498678 ODF1Q14990 250 aa18.49■□□□□ 0.55
HOXB3-212ENST00000498678 TRBV10-1A0A0K0K1A3 114 aa18.49■□□□□ 0.55
HOXB3-212ENST00000498678 DEFB130BP0DP73 79 aa18.48■□□□□ 0.55
HOXB3-212ENST00000498678 DEFB130AP0DP74 79 aa18.48■□□□□ 0.55
HOXB3-212ENST00000498678 IGIPA6NJ69 53 aa18.48■□□□□ 0.55
HOXB3-212ENST00000498678 ZNRF2Q8NHG8 242 aa18.48■□□□□ 0.55
HOXB3-212ENST00000498678 ZMAT4Q9H898 229 aa18.48■□□□□ 0.55
HOXB3-212ENST00000498678 NBEAL2Q6ZNJ1 2754 aa18.48■□□□□ 0.55
HOXB3-212ENST00000498678 IGHV4-28A0A0C4DH34 117 aa18.47■□□□□ 0.55
HOXB3-212ENST00000498678 SAMD5Q5TGI4 173 aa18.47■□□□□ 0.55
HOXB3-212ENST00000498678 C20orf203Q8NBC4 194 aa18.47■□□□□ 0.55
HOXB3-212ENST00000498678 TRBV7-3A0A075B6L6 115 aa18.47■□□□□ 0.55
HOXB3-212ENST00000498678 SIVA1O15304 175 aa18.47■□□□□ 0.55
HOXB3-212ENST00000498678 FHL2Q14192 279 aa18.47■□□□□ 0.55
HOXB3-212ENST00000498678 TP73-AS1Q9UF72 201 aa18.47■□□□□ 0.55
HOXB3-212ENST00000498678 Q8NAQ8 132 aa18.46■□□□□ 0.55
HOXB3-212ENST00000498678 PHLDA1Q8WV24 401 aaPredicted RBP18.46■□□□□ 0.55
HOXB3-212ENST00000498678 TRGV4A0A0C4DH28 118 aa18.45■□□□□ 0.54
HOXB3-212ENST00000498678 DEFB4AO15263 64 aa18.45■□□□□ 0.54
HOXB3-212ENST00000498678 MIFP14174 115 aa18.45■□□□□ 0.54
HOXB3-212ENST00000498678 FAM222AQ5U5X8 452 aa18.45■□□□□ 0.54
HOXB3-212ENST00000498678 IGHV3-38A0A0C4DH36 116 aa18.45■□□□□ 0.54
HOXB3-212ENST00000498678 TRBV6-4A0A1B0GX49 114 aa18.45■□□□□ 0.54
HOXB3-212ENST00000498678 F8W1H4 67 aa18.45■□□□□ 0.54
HOXB3-212ENST00000498678 RPL36AP83881 106 aaKnown RBP18.45■□□□□ 0.54
HOXB3-212ENST00000498678 BAALCQ8WXS3 180 aa18.45■□□□□ 0.54
HOXB3-212ENST00000498678 RPL36ALQ969Q0 106 aaKnown RBP18.45■□□□□ 0.54
HOXB3-212ENST00000498678 MDFIQ99750 246 aa18.45■□□□□ 0.54
HOXB3-212ENST00000498678 LYRM9A8MSI8 78 aa18.44■□□□□ 0.54
HOXB3-212ENST00000498678 A0A087WX48 190 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms