RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 RAB5CP51148 216 aa7.69□□□□□ -1.18
CNOT4-211ENST00000498534 NKX2-5P52952 324 aaPredicted RBP7.69□□□□□ -1.18
CNOT4-211ENST00000498534 SUMO4Q6EEV6 95 aa7.69□□□□□ -1.18
CNOT4-211ENST00000498534 RASL11AQ6T310 242 aa7.69□□□□□ -1.18
CNOT4-211ENST00000498534 OR2D3Q8NGH3 330 aa7.69□□□□□ -1.18
CNOT4-211ENST00000498534 RNF185Q96GF1 192 aa7.69□□□□□ -1.18
CNOT4-211ENST00000498534 HMSDA8MTL9 139 aa7.68□□□□□ -1.18
CNOT4-211ENST00000498534 CIRBPQ14011 172 aaKnown RBP7.68□□□□□ -1.18
CNOT4-211ENST00000498534 RGS21Q2M5E4 152 aa7.68□□□□□ -1.18
CNOT4-211ENST00000498534 WDR73Q6P4I2 378 aa7.68□□□□□ -1.18
CNOT4-211ENST00000498534 C20orf203Q8NBC4 194 aa7.68□□□□□ -1.18
CNOT4-211ENST00000498534 DPH3P1Q9H4G8 78 aa7.68□□□□□ -1.18
CNOT4-211ENST00000498534 MANBALQ9NQG1 85 aa7.68□□□□□ -1.18
CNOT4-211ENST00000498534 NIT2Q9NQR4 276 aa7.68□□□□□ -1.18
CNOT4-211ENST00000498534 GNG13Q9P2W3 67 aa7.68□□□□□ -1.18
CNOT4-211ENST00000498534 IGLV4-60A0A075B6I1 120 aa7.67□□□□□ -1.18
CNOT4-211ENST00000498534 TEX46H3BTG2 121 aa7.67□□□□□ -1.18
CNOT4-211ENST00000498534 TRGC1P0CF51 173 aa7.67□□□□□ -1.18
CNOT4-211ENST00000498534 IGLC6P0CF74 106 aa7.67□□□□□ -1.18
CNOT4-211ENST00000498534 SULT1A2P50226 295 aa7.67□□□□□ -1.18
CNOT4-211ENST00000498534 CENPWQ5EE01 88 aa7.67□□□□□ -1.18
CNOT4-211ENST00000498534 CFAP161Q6P656 301 aa7.67□□□□□ -1.18
CNOT4-211ENST00000498534 PGLYRP4Q96LB8 373 aa7.67□□□□□ -1.18
CNOT4-211ENST00000498534 A0A087WYN8 130 aa7.66□□□□□ -1.18
CNOT4-211ENST00000498534 BCL2L11O43521 198 aa7.66□□□□□ -1.18
CNOT4-211ENST00000498534 IFNA1P01562 189 aa7.66□□□□□ -1.18
CNOT4-211ENST00000498534 GNG4P50150 75 aa7.66□□□□□ -1.18
CNOT4-211ENST00000498534 COTL1Q14019 142 aa7.66□□□□□ -1.18
CNOT4-211ENST00000498534 C11orf52Q96A22 123 aa7.66□□□□□ -1.18
CNOT4-211ENST00000498534 SMIM12Q96EX1 92 aa7.66□□□□□ -1.18
CNOT4-211ENST00000498534 BIN3Q9NQY0 253 aa7.66□□□□□ -1.18
CNOT4-211ENST00000498534 SLPIP03973 132 aa7.65□□□□□ -1.18
CNOT4-211ENST00000498534 NTF3P20783 257 aa7.65□□□□□ -1.18
CNOT4-211ENST00000498534 AMTP48728 403 aa7.65□□□□□ -1.18
CNOT4-211ENST00000498534 CCL20P78556 96 aa7.65□□□□□ -1.18
CNOT4-211ENST00000498534 LYZL1Q6UWQ5 148 aa7.65□□□□□ -1.18
CNOT4-211ENST00000498534 C7orf33Q8WU49 177 aa7.65□□□□□ -1.18
CNOT4-211ENST00000498534 TRAV1-1A0A0B4J248 108 aa7.64□□□□□ -1.19
CNOT4-211ENST00000498534 RAB19A4D1S5 217 aa7.64□□□□□ -1.19
CNOT4-211ENST00000498534 C19orf71A6NCJ1 209 aa7.64□□□□□ -1.19
CNOT4-211ENST00000498534 CHTF8P0CG12 524 aa7.64□□□□□ -1.19
CNOT4-211ENST00000498534 MT1HL1P0DM35 61 aa7.64□□□□□ -1.19
CNOT4-211ENST00000498534 EIF5AL1Q6IS14 154 aaKnown RBP7.64□□□□□ -1.19
CNOT4-211ENST00000498534 C9orf62Q8N4C0 152 aa7.64□□□□□ -1.19
CNOT4-211ENST00000498534 SPACA4Q8TDM5 124 aa7.64□□□□□ -1.19
CNOT4-211ENST00000498534 GFRA4Q9GZZ7 299 aa7.64□□□□□ -1.19
CNOT4-211ENST00000498534 GAGE12HA6NDE8 117 aa7.63□□□□□ -1.19
CNOT4-211ENST00000498534 PDE6DO43924 150 aa7.63□□□□□ -1.19
CNOT4-211ENST00000498534 RPS10P46783 165 aaKnown RBP7.63□□□□□ -1.19
CNOT4-211ENST00000498534 TWIST1Q15672 202 aa7.63□□□□□ -1.19
CNOT4-211ENST00000498534 AMMECR1LQ6DCA0 310 aa7.63□□□□□ -1.19
CNOT4-211ENST00000498534 MED9Q9NWA0 146 aa7.63□□□□□ -1.19
CNOT4-211ENST00000498534 PLAC8Q9NZF1 115 aa7.63□□□□□ -1.19
CNOT4-211ENST00000498534 IGKV3OR2-268A0A0C4DH90 116 aa7.62□□□□□ -1.19
CNOT4-211ENST00000498534 COX6A2Q02221 97 aa7.62□□□□□ -1.19
CNOT4-211ENST00000498534 GTSF1Q8WW33 167 aa7.62□□□□□ -1.19
CNOT4-211ENST00000498534 PHOX2AO14813 284 aa7.61□□□□□ -1.19
CNOT4-211ENST00000498534 NDUFS6O75380 124 aaKnown RBP7.61□□□□□ -1.19
CNOT4-211ENST00000498534 MEF2BQ02080 365 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-211ENST00000498534 MAJINQ3KP22 176 aa7.61□□□□□ -1.19
CNOT4-211ENST00000498534 SMIM15Q7Z3B0 74 aa7.61□□□□□ -1.19
CNOT4-211ENST00000498534 RNASEKQ6P5S7 137 aaKnown RBP7.6□□□□□ -1.19
CNOT4-211ENST00000498534 C15orf56Q8N910 161 aa7.6□□□□□ -1.19
CNOT4-211ENST00000498534 GATD1Q8NB37 220 aa7.6□□□□□ -1.19
CNOT4-211ENST00000498534 NUDT10Q8NFP7 164 aa7.6□□□□□ -1.19
CNOT4-211ENST00000498534 NUDT11Q96G61 164 aa7.6□□□□□ -1.19
CNOT4-211ENST00000498534 IGKV2-24A0A0C4DH68 120 aa7.59□□□□□ -1.19
CNOT4-211ENST00000498534 H7C423 109 aa7.59□□□□□ -1.19
CNOT4-211ENST00000498534 NCR2O95944 276 aa7.59□□□□□ -1.19
CNOT4-211ENST00000498534 CTRLP40313 264 aa7.59□□□□□ -1.19
CNOT4-211ENST00000498534 HIGD2BQ4VC39 106 aa7.59□□□□□ -1.19
CNOT4-211ENST00000498534 TEX261Q6UWH6 196 aa7.59□□□□□ -1.19
CNOT4-211ENST00000498534 PRSS3P2Q8NHM4 247 aa7.59□□□□□ -1.19
CNOT4-211ENST00000498534 CHCHD10Q8WYQ3 142 aaPredicted RBP7.59□□□□□ -1.19
CNOT4-211ENST00000498534 STPG4Q8N801 248 aa7.58□□□□□ -1.2
CNOT4-211ENST00000498534 CNFNQ9BYD5 112 aa7.58□□□□□ -1.2
CNOT4-211ENST00000498534 LINC00474Q9P2X8 69 aa7.58□□□□□ -1.2
CNOT4-211ENST00000498534 PKIGQ9Y2B9 76 aa7.58□□□□□ -1.2
CNOT4-211ENST00000498534 TRBV20OR9-2A0A075B6H5 130 aa7.57□□□□□ -1.2
CNOT4-211ENST00000498534 GVQW2A0A096LPI5 108 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-211ENST00000498534 TRAV26-2A0A0B4J265 109 aa7.57□□□□□ -1.2
CNOT4-211ENST00000498534 H3BS24 57 aa7.57□□□□□ -1.2
CNOT4-211ENST00000498534 APCSP02743 223 aa7.57□□□□□ -1.2
CNOT4-211ENST00000498534 FGF6P10767 208 aa7.57□□□□□ -1.2
CNOT4-211ENST00000498534 TAGLN2P37802 199 aaKnown RBP7.57□□□□□ -1.2
CNOT4-211ENST00000498534 LYPD6BQ8NI32 183 aa7.57□□□□□ -1.2
CNOT4-211ENST00000498534 TMEM101Q96IK0 257 aa7.57□□□□□ -1.2
CNOT4-211ENST00000498534 BTF3L4Q96K17 158 aa7.57□□□□□ -1.2
CNOT4-211ENST00000498534 RPP21Q9H633 154 aaKnown RBP7.57□□□□□ -1.2
CNOT4-211ENST00000498534 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-211ENST00000498534 IGKV2-29A2NJV5 120 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-211ENST00000498534 BCL2P10415 239 aa7.56□□□□□ -1.2
CNOT4-211ENST00000498534 PMCHP20382 165 aa7.56□□□□□ -1.2
CNOT4-211ENST00000498534 Q6ZNX1 250 aa7.56□□□□□ -1.2
CNOT4-211ENST00000498534 RPL39LQ96EH5 51 aaKnown RBP7.56□□□□□ -1.2
CNOT4-211ENST00000498534 LINC01600Q96MT4 127 aa7.56□□□□□ -1.2
CNOT4-211ENST00000498534 RNASE7Q9H1E1 156 aaKnown RBP7.56□□□□□ -1.2
CNOT4-211ENST00000498534 SDHAF1A6NFY7 115 aa7.55□□□□□ -1.2
CNOT4-211ENST00000498534 I3L3M4 83 aa7.55□□□□□ -1.2
CNOT4-211ENST00000498534 ZNF25P17030 456 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 851.4 ms