RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 M0QY20 66 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 RS1O15537 224 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 NCR2O95944 276 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 CKS2P33552 79 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 APOC4P55056 127 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 RIPPLY3P57055 190 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 RRN3P1Q2M238 152 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 KRTAP21-3Q3LHN1 58 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 CFAP126Q5VTH2 177 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 SMIM15Q7Z3B0 74 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 NIT1Q86X76 327 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 PACRGQ96M98 296 aaPredicted RBP3.77□□□□□ -1.81
GGPS1-208ENST00000497327 HIST1H2BLQ99880 126 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 MRPL16Q9NX20 251 aaKnown RBP3.77□□□□□ -1.81
GGPS1-208ENST00000497327 PKD1L1Q8TDX9 2849 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 NOTCH1P46531 2555 aa3.77□□□□□ -1.81
GGPS1-208ENST00000497327 TRBV6-5A0A0K0K1A5 114 aa3.76□□□□□ -1.81
GGPS1-208ENST00000497327 LINC00614P0C842 121 aa3.76□□□□□ -1.81
GGPS1-208ENST00000497327 RPL32P62910 135 aaKnown RBP3.76□□□□□ -1.81
GGPS1-208ENST00000497327 ZFP2Q6ZN57 461 aa3.76□□□□□ -1.81
GGPS1-208ENST00000497327 Q6ZTI0 123 aa3.76□□□□□ -1.81
GGPS1-208ENST00000497327 BAGE3Q86Y29 109 aa3.76□□□□□ -1.81
GGPS1-208ENST00000497327 CHCHD1Q96BP2 118 aaKnown RBP3.76□□□□□ -1.81
GGPS1-208ENST00000497327 C18orf15Q96N68 181 aa3.76□□□□□ -1.81
GGPS1-208ENST00000497327 C20orf78Q9BR46 151 aa3.76□□□□□ -1.81
GGPS1-208ENST00000497327 NOP10Q9NPE3 64 aaKnown RBP3.76□□□□□ -1.81
GGPS1-208ENST00000497327 NBEAL1Q6ZS30 2694 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 A0A096LNJ9 63 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 TRGV1A0A0A0MS02 117 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 K7EIL1 84 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 IGHV3-53P01767 116 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 MGPP08493 103 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 SMIM17P0DL12 118 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 VPREB1P12018 145 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 IFI27P40305 119 aaPredicted RBP3.75□□□□□ -1.81
GGPS1-208ENST00000497327 POLR2KP53803 58 aaKnown RBP3.75□□□□□ -1.81
GGPS1-208ENST00000497327 DEFB135Q30KP9 77 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 PDZD11Q5EBL8 140 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 Q8N8P6 123 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 Q8NAQ8 132 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 OR11H2Q8NH07 326 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 RPL39LQ96EH5 51 aaKnown RBP3.75□□□□□ -1.81
GGPS1-208ENST00000497327 MAP1LC3AQ9H492 121 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 TP53TG1Q9Y2A0 90 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 ANK2Q01484 3957 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 CMYA5Q8N3K9 4069 aa3.75□□□□□ -1.81
GGPS1-208ENST00000497327 TRAV4A0A0B4J268 109 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 LOC389332A0A1B0GUA5 103 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 CIDEAO60543 219 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 PPP1R17O96001 155 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 MIFP14174 115 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 FABP4P15090 132 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 PMCHP20382 165 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 GAGE2BQ13066 116 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 GAGE2EQ4V326 116 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 FAM74A4Q5TZK3 123 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 GAGE2AQ6NT46 116 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 RNASEKQ6P5S7 137 aaKnown RBP3.74□□□□□ -1.81
GGPS1-208ENST00000497327 Q75L30 129 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 FAM19A2Q8N3H0 131 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 TMEM70Q9BUB7 260 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 SMIM2Q9BVW6 85 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 NXT2Q9NPJ8 142 aaKnown RBP3.74□□□□□ -1.81
GGPS1-208ENST00000497327 NIT2Q9NQR4 276 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 GAGE2DQ9UEU5 116 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 Q9UF83 564 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 DNAH3Q8TD57 4116 aa3.74□□□□□ -1.81
GGPS1-208ENST00000497327 IGHV3-73A0A0B4J1V6 119 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 IGHV1-24A0A0C4DH33 117 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 TRBV27A0A0K0K1C4 114 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 LYRM9A8MSI8 78 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 K7EMI3 77 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 HSBP1O75506 76 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 PRB2P02812 416 aaPredicted RBP3.73□□□□□ -1.81
GGPS1-208ENST00000497327 PRSS1P07477 247 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 P0DMU3 169 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 FAM231AP0DMU4 169 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 FAM231CP0DMU5 169 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 S100A2P29034 98 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 ZNF56Q15929 161 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 FA2HQ7L5A8 372 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 OR4C5Q8NGB2 326 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 OR10D4PQ8NGN7 298 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 ST20Q9HBF5 79 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 NBEAL2Q6ZNJ1 2754 aa3.73□□□□□ -1.81
GGPS1-208ENST00000497327 DNHD1Q96M86 4753 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 TRBV10-1A0A0K0K1A3 114 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 TRBV6-4A0A1B0GX49 114 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 SDHAF1A6NFY7 115 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 H7C1H1 209 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 DEFB4AO15263 64 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 FCER1GP30273 86 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 AKR1D1P51857 326 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 EMP1P54849 157 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 GAGE5Q13069 117 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 GAGE6Q13070 117 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 PMCHL1Q16048 86 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 PYY3Q5JQD4 70 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 FAM222AQ5U5X8 452 aa3.72□□□□□ -1.81
GGPS1-208ENST00000497327 LINC00173Q6ZV60 143 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms