RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 LYZL1Q6UWQ5 148 aa10.84□□□□□ -0.67
TRAPPC3-207ENST00000497251 SDIM1Q6ZPB5 146 aa10.84□□□□□ -0.67
TRAPPC3-207ENST00000497251 Q6ZRU5 148 aa10.84□□□□□ -0.67
TRAPPC3-207ENST00000497251 NTM-AS1Q6ZSK4 140 aa10.84□□□□□ -0.67
TRAPPC3-207ENST00000497251 LINC00269Q8N2A0 174 aa10.84□□□□□ -0.67
TRAPPC3-207ENST00000497251 RNF185Q96GF1 192 aa10.84□□□□□ -0.67
TRAPPC3-207ENST00000497251 CNFNQ9BYD5 112 aa10.84□□□□□ -0.67
TRAPPC3-207ENST00000497251 RNASE7Q9H1E1 156 aaKnown RBP10.84□□□□□ -0.67
TRAPPC3-207ENST00000497251 KRTAP26-1Q6PEX3 210 aa10.83□□□□□ -0.68
TRAPPC3-207ENST00000497251 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
TRAPPC3-207ENST00000497251 FAT3Q8TDW7 4589 aa10.82□□□□□ -0.68
TRAPPC3-207ENST00000497251 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC3-207ENST00000497251 CIRBPQ14011 172 aaKnown RBP10.82□□□□□ -0.68
TRAPPC3-207ENST00000497251 NTF3P20783 257 aa10.81□□□□□ -0.68
TRAPPC3-207ENST00000497251 CEBPGP53567 150 aa10.81□□□□□ -0.68
TRAPPC3-207ENST00000497251 REG3AQ06141 175 aa10.81□□□□□ -0.68
TRAPPC3-207ENST00000497251 SMIM7Q9BQ49 75 aa10.81□□□□□ -0.68
TRAPPC3-207ENST00000497251 AP5S1Q9NUS5 200 aa10.81□□□□□ -0.68
TRAPPC3-207ENST00000497251 M0QY20 66 aa10.8□□□□□ -0.68
TRAPPC3-207ENST00000497251 MGPP08493 103 aa10.8□□□□□ -0.68
TRAPPC3-207ENST00000497251 GAGE6Q13070 117 aa10.8□□□□□ -0.68
TRAPPC3-207ENST00000497251 CT83Q5H943 113 aa10.8□□□□□ -0.68
TRAPPC3-207ENST00000497251 TEX261Q6UWH6 196 aa10.8□□□□□ -0.68
TRAPPC3-207ENST00000497251 DPH3P1Q9H4G8 78 aa10.8□□□□□ -0.68
TRAPPC3-207ENST00000497251 A8MWL6 223 aa10.79□□□□□ -0.68
TRAPPC3-207ENST00000497251 GATCO43716 136 aaKnown RBP10.79□□□□□ -0.68
TRAPPC3-207ENST00000497251 SRP19P09132 144 aaKnown RBP10.79□□□□□ -0.68
TRAPPC3-207ENST00000497251 SUMO4Q6EEV6 95 aa10.79□□□□□ -0.68
TRAPPC3-207ENST00000497251 PGLYRP4Q96LB8 373 aa10.79□□□□□ -0.68
TRAPPC3-207ENST00000497251 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC3-207ENST00000497251 IGHV3-64A0A075B6Q5 118 aa10.78□□□□□ -0.68
TRAPPC3-207ENST00000497251 ZNF727A8MUV8 499 aa10.78□□□□□ -0.68
TRAPPC3-207ENST00000497251 TWIST1Q15672 202 aa10.78□□□□□ -0.68
TRAPPC3-207ENST00000497251 LINC01551Q86U37 167 aa10.78□□□□□ -0.68
TRAPPC3-207ENST00000497251 GTSF1Q8WW33 167 aa10.78□□□□□ -0.68
TRAPPC3-207ENST00000497251 TMEM243Q9BU79 118 aa10.78□□□□□ -0.68
TRAPPC3-207ENST00000497251 hDV102S1A0JD36 115 aa10.77□□□□□ -0.69
TRAPPC3-207ENST00000497251 FOXA3P55318 350 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC3-207ENST00000497251 FAM74A3Q4VXF1 159 aa10.77□□□□□ -0.69
TRAPPC3-207ENST00000497251 CFAP161Q6P656 301 aa10.77□□□□□ -0.69
TRAPPC3-207ENST00000497251 RASL11AQ6T310 242 aa10.77□□□□□ -0.69
TRAPPC3-207ENST00000497251 PKHD1L1Q86WI1 4243 aa10.77□□□□□ -0.69
TRAPPC3-207ENST00000497251 CLPSL2Q6UWE3 100 aa10.76□□□□□ -0.69
TRAPPC3-207ENST00000497251 C20orf203Q8NBC4 194 aa10.76□□□□□ -0.69
TRAPPC3-207ENST00000497251 DPH3Q96FX2 82 aa10.76□□□□□ -0.69
TRAPPC3-207ENST00000497251 SMDT1Q9H4I9 107 aa10.76□□□□□ -0.69
TRAPPC3-207ENST00000497251 OSTCQ9NRP0 149 aa10.76□□□□□ -0.69
TRAPPC3-207ENST00000497251 HNRNPA3P51991 378 aaKnown RBP10.75□□□□□ -0.69
TRAPPC3-207ENST00000497251 SMIM15Q7Z3B0 74 aa10.75□□□□□ -0.69
TRAPPC3-207ENST00000497251 GFRA4Q9GZZ7 299 aa10.75□□□□□ -0.69
TRAPPC3-207ENST00000497251 NIT2Q9NQR4 276 aa10.75□□□□□ -0.69
TRAPPC3-207ENST00000497251 FAM231BA6NCW3 169 aa10.74□□□□□ -0.69
TRAPPC3-207ENST00000497251 TSKUQ8WUA8 353 aa10.74□□□□□ -0.69
TRAPPC3-207ENST00000497251 UBR4Q5T4S7 5183 aa10.74□□□□□ -0.69
TRAPPC3-207ENST00000497251 IGLV10-54A0A075B6I4 117 aa10.73□□□□□ -0.69
TRAPPC3-207ENST00000497251 UBE2L6O14933 153 aa10.73□□□□□ -0.69
TRAPPC3-207ENST00000497251 PEA15Q15121 130 aa10.73□□□□□ -0.69
TRAPPC3-207ENST00000497251 BORCS7Q96B45 105 aa10.73□□□□□ -0.69
TRAPPC3-207ENST00000497251 PANO1I0J062 215 aa10.72□□□□□ -0.69
TRAPPC3-207ENST00000497251 MT1HL1P0DM35 61 aa10.72□□□□□ -0.69
TRAPPC3-207ENST00000497251 COTL1Q14019 142 aa10.72□□□□□ -0.69
TRAPPC3-207ENST00000497251 TMEM241Q24JQ0 296 aa10.72□□□□□ -0.69
TRAPPC3-207ENST00000497251 C7orf33Q8WU49 177 aa10.72□□□□□ -0.69
TRAPPC3-207ENST00000497251 PLAC8Q9NZF1 115 aa10.72□□□□□ -0.69
TRAPPC3-207ENST00000497251 A0A087WYN8 130 aa10.71□□□□□ -0.69
TRAPPC3-207ENST00000497251 HIGD1CA8MV81 97 aa10.71□□□□□ -0.69
TRAPPC3-207ENST00000497251 SPACA4Q8TDM5 124 aa10.71□□□□□ -0.69
TRAPPC3-207ENST00000497251 ISOC2Q96AB3 205 aa10.71□□□□□ -0.69
TRAPPC3-207ENST00000497251 PKIGQ9Y2B9 76 aa10.71□□□□□ -0.69
TRAPPC3-207ENST00000497251 IGLV4-60A0A075B6I1 120 aa10.7□□□□□ -0.7
TRAPPC3-207ENST00000497251 A0A1B0GUT8 65 aa10.7□□□□□ -0.7
TRAPPC3-207ENST00000497251 C9JQL5 133 aa10.7□□□□□ -0.7
TRAPPC3-207ENST00000497251 RPL23P62829 140 aaKnown RBP10.7□□□□□ -0.7
TRAPPC3-207ENST00000497251 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
TRAPPC3-207ENST00000497251 NAT8Q9UHE5 227 aa10.7□□□□□ -0.7
TRAPPC3-207ENST00000497251 V9GYV3 84 aa10.7□□□□□ -0.7
TRAPPC3-207ENST00000497251 H7C423 109 aa10.69□□□□□ -0.7
TRAPPC3-207ENST00000497251 AMTP48728 403 aa10.69□□□□□ -0.7
TRAPPC3-207ENST00000497251 SRSF3P84103 164 aaKnown RBP10.69□□□□□ -0.7
TRAPPC3-207ENST00000497251 NCR2O95944 276 aa10.68□□□□□ -0.7
TRAPPC3-207ENST00000497251 SLPIP03973 132 aa10.68□□□□□ -0.7
TRAPPC3-207ENST00000497251 RPS10P46783 165 aaKnown RBP10.68□□□□□ -0.7
TRAPPC3-207ENST00000497251 TRAV26-2A0A0B4J265 109 aa10.67□□□□□ -0.7
TRAPPC3-207ENST00000497251 ADIRFQ15847 76 aa10.67□□□□□ -0.7
TRAPPC3-207ENST00000497251 TMEM191AQ9H0A3 160 aa10.67□□□□□ -0.7
TRAPPC3-207ENST00000497251 LINC00474Q9P2X8 69 aa10.67□□□□□ -0.7
TRAPPC3-207ENST00000497251 RIGQ13278 110 aa10.65□□□□□ -0.7
TRAPPC3-207ENST00000497251 C15orf56Q8N910 161 aa10.65□□□□□ -0.7
TRAPPC3-207ENST00000497251 NUP35Q8NFH5 326 aa10.65□□□□□ -0.7
TRAPPC3-207ENST00000497251 RPL39LQ96EH5 51 aaKnown RBP10.65□□□□□ -0.7
TRAPPC3-207ENST00000497251 NAT8BQ9UHF3 227 aa10.65□□□□□ -0.7
TRAPPC3-207ENST00000497251 TRBV6-5A0A0K0K1A5 114 aa10.64□□□□□ -0.71
TRAPPC3-207ENST00000497251 GAGE12HA6NDE8 117 aa10.64□□□□□ -0.71
TRAPPC3-207ENST00000497251 RAB14P61106 215 aa10.64□□□□□ -0.71
TRAPPC3-207ENST00000497251 AMMECR1LQ6DCA0 310 aa10.64□□□□□ -0.71
TRAPPC3-207ENST00000497251 SMIM27A0A1W2PRY6 76 aa10.63□□□□□ -0.71
TRAPPC3-207ENST00000497251 SDHAF1A6NFY7 115 aa10.63□□□□□ -0.71
TRAPPC3-207ENST00000497251 CHTF8P0CG12 524 aa10.63□□□□□ -0.71
TRAPPC3-207ENST00000497251 ZNF25P17030 456 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC3-207ENST00000497251 COX6A2Q02221 97 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms