RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 TCAPO15273 167 aa15.01□□□□□ -0.01
ECHDC3-205ENST00000496136 TIRAPP58753 221 aa15.01□□□□□ -0.01
ECHDC3-205ENST00000496136 Q0VG73 95 aa15.01□□□□□ -0.01
ECHDC3-205ENST00000496136 TMEM97Q5BJF2 176 aa15□□□□□ -0.01
ECHDC3-205ENST00000496136 NIT1Q86X76 327 aa14.99□□□□□ -0.01
ECHDC3-205ENST00000496136 URB1-AS1Q96HZ7 61 aa14.99□□□□□ -0.01
ECHDC3-205ENST00000496136 FCER1GP30273 86 aa14.98□□□□□ -0.01
ECHDC3-205ENST00000496136 CCL18P55774 89 aa14.98□□□□□ -0.01
ECHDC3-205ENST00000496136 LELP1Q5T871 98 aa14.98□□□□□ -0.01
ECHDC3-205ENST00000496136 LINC00614P0C842 121 aa14.98□□□□□ -0.01
ECHDC3-205ENST00000496136 LINC00588Q9Y4M8 146 aa14.98□□□□□ -0.01
ECHDC3-205ENST00000496136 LINC01546A6NGU7 62 aa14.97□□□□□ -0.01
ECHDC3-205ENST00000496136 BAGE3Q86Y29 109 aa14.97□□□□□ -0.01
ECHDC3-205ENST00000496136 TRBV25-1A0A075B6N4 114 aa14.96□□□□□ -0.01
ECHDC3-205ENST00000496136 IGHV1-24A0A0C4DH33 117 aa14.96□□□□□ -0.01
ECHDC3-205ENST00000496136 K7EMI3 77 aa14.96□□□□□ -0.01
ECHDC3-205ENST00000496136 AMTP48728 403 aa14.96□□□□□ -0.01
ECHDC3-205ENST00000496136 FA2HQ7L5A8 372 aa14.96□□□□□ -0.01
ECHDC3-205ENST00000496136 CHCHD7Q9BUK0 85 aa14.96□□□□□ -0.01
ECHDC3-205ENST00000496136 ESDP10768 282 aa14.95□□□□□ -0.02
ECHDC3-205ENST00000496136 RAB5BP61020 215 aa14.95□□□□□ -0.02
ECHDC3-205ENST00000496136 LAGE3Q14657 143 aa14.95□□□□□ -0.02
ECHDC3-205ENST00000496136 AP5S1Q9NUS5 200 aa14.95□□□□□ -0.02
ECHDC3-205ENST00000496136 PLECQ15149 4684 aaKnown RBP14.94□□□□□ -0.02
ECHDC3-205ENST00000496136 RNASEKQ6P5S7 137 aaKnown RBP14.93□□□□□ -0.02
ECHDC3-205ENST00000496136 ORMDL2Q53FV1 153 aa14.93□□□□□ -0.02
ECHDC3-205ENST00000496136 TMEM243Q9BU79 118 aa14.93□□□□□ -0.02
ECHDC3-205ENST00000496136 MRPS16Q9Y3D3 137 aaKnown RBP14.93□□□□□ -0.02
ECHDC3-205ENST00000496136 TRAV8-6A0A0B4J262 113 aa14.92□□□□□ -0.02
ECHDC3-205ENST00000496136 LINC00310P59036 64 aa14.92□□□□□ -0.02
ECHDC3-205ENST00000496136 CHCHD5Q9BSY4 110 aa14.92□□□□□ -0.02
ECHDC3-205ENST00000496136 SERF1AO75920 110 aa14.91□□□□□ -0.02
ECHDC3-205ENST00000496136 C20orf203Q8NBC4 194 aa14.91□□□□□ -0.02
ECHDC3-205ENST00000496136 CHCHD1Q96BP2 118 aaKnown RBP14.91□□□□□ -0.02
ECHDC3-205ENST00000496136 NUPR1O60356 82 aa14.9□□□□□ -0.02
ECHDC3-205ENST00000496136 WFDC10BQ8IUB3 73 aa14.9□□□□□ -0.02
ECHDC3-205ENST00000496136 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.9□□□□□ -0.02
ECHDC3-205ENST00000496136 IGKV2-29A2NJV5 120 aaPredicted RBP14.9□□□□□ -0.02
ECHDC3-205ENST00000496136 NDUFA6P56556 154 aa14.9□□□□□ -0.02
ECHDC3-205ENST00000496136 UBE2DNLQ8IWF7 75 aa14.9□□□□□ -0.02
ECHDC3-205ENST00000496136 LYSTQ99698 3801 aa14.9□□□□□ -0.02
ECHDC3-205ENST00000496136 UPK3BQ9BT76 320 aa14.9□□□□□ -0.02
ECHDC3-205ENST00000496136 RPL39P62891 51 aaKnown RBP14.88□□□□□ -0.03
ECHDC3-205ENST00000496136 BTF3P20290 206 aaKnown RBP14.88□□□□□ -0.03
ECHDC3-205ENST00000496136 GAGE6Q13070 117 aa14.88□□□□□ -0.03
ECHDC3-205ENST00000496136 PMCHL1Q16048 86 aa14.88□□□□□ -0.03
ECHDC3-205ENST00000496136 COA6Q5JTJ3 125 aaKnown RBP14.88□□□□□ -0.03
ECHDC3-205ENST00000496136 TMEM262E9PQX1 116 aa14.87□□□□□ -0.03
ECHDC3-205ENST00000496136 H7C423 109 aa14.87□□□□□ -0.03
ECHDC3-205ENST00000496136 UBE2L6O14933 153 aa14.87□□□□□ -0.03
ECHDC3-205ENST00000496136 A0A096LNJ9 63 aa14.86□□□□□ -0.03
ECHDC3-205ENST00000496136 HSBP1O75506 76 aa14.86□□□□□ -0.03
ECHDC3-205ENST00000496136 LGALS9CQ6DKI2 356 aa14.86□□□□□ -0.03
ECHDC3-205ENST00000496136 C2orf66Q6UXQ4 117 aa14.86□□□□□ -0.03
ECHDC3-205ENST00000496136 TMEM18Q96B42 140 aa14.86□□□□□ -0.03
ECHDC3-205ENST00000496136 G0S2P27469 103 aa14.85□□□□□ -0.03
ECHDC3-205ENST00000496136 Q9H8V8 135 aa14.85□□□□□ -0.03
ECHDC3-205ENST00000496136 CYSLTR1Q9Y271 337 aa14.85□□□□□ -0.03
ECHDC3-205ENST00000496136 SIVA1O15304 175 aa14.85□□□□□ -0.03
ECHDC3-205ENST00000496136 FGF6P10767 208 aa14.85□□□□□ -0.03
ECHDC3-205ENST00000496136 FAM19A2Q8N3H0 131 aa14.85□□□□□ -0.03
ECHDC3-205ENST00000496136 Q8N3U1 123 aa14.85□□□□□ -0.03
ECHDC3-205ENST00000496136 MPV17L2Q567V2 206 aa14.84□□□□□ -0.03
ECHDC3-205ENST00000496136 TOMM6Q96B49 74 aa14.84□□□□□ -0.03
ECHDC3-205ENST00000496136 UBE2D4Q9Y2X8 147 aa14.83□□□□□ -0.03
ECHDC3-205ENST00000496136 A0A087WX48 190 aa14.83□□□□□ -0.04
ECHDC3-205ENST00000496136 A0A1B0GUV1 79 aa14.83□□□□□ -0.04
ECHDC3-205ENST00000496136 DNAH10OSP0CZ25 163 aa14.83□□□□□ -0.04
ECHDC3-205ENST00000496136 MRPL52Q86TS9 123 aaKnown RBP14.83□□□□□ -0.04
ECHDC3-205ENST00000496136 Q8N976 141 aa14.83□□□□□ -0.04
ECHDC3-205ENST00000496136 HBDP02042 147 aa14.82□□□□□ -0.04
ECHDC3-205ENST00000496136 RBX1P62877 108 aa14.82□□□□□ -0.04
ECHDC3-205ENST00000496136 AMMECR1LQ6DCA0 310 aa14.82□□□□□ -0.04
ECHDC3-205ENST00000496136 PKIAP61925 76 aa14.81□□□□□ -0.04
ECHDC3-205ENST00000496136 LINC01556Q5JQF7 62 aa14.81□□□□□ -0.04
ECHDC3-205ENST00000496136 IGLV4-60A0A075B6I1 120 aa14.8□□□□□ -0.04
ECHDC3-205ENST00000496136 IGHV3-30P01768 117 aa14.8□□□□□ -0.04
ECHDC3-205ENST00000496136 IGHV3-33P01772 117 aa14.8□□□□□ -0.04
ECHDC3-205ENST00000496136 S100A6P06703 90 aa14.8□□□□□ -0.04
ECHDC3-205ENST00000496136 IGHV3-30-3P0DP02 117 aa14.8□□□□□ -0.04
ECHDC3-205ENST00000496136 IGHV3-30-5P0DP03 117 aa14.8□□□□□ -0.04
ECHDC3-205ENST00000496136 LINC00476Q8WZB0 136 aa14.8□□□□□ -0.04
ECHDC3-205ENST00000496136 TIMM21Q9BVV7 248 aa14.8□□□□□ -0.04
ECHDC3-205ENST00000496136 CSDC2Q9Y534 153 aaKnown RBP14.8□□□□□ -0.04
ECHDC3-205ENST00000496136 IGIPA6NJ69 53 aa14.8□□□□□ -0.04
ECHDC3-205ENST00000496136 LY6G6CO95867 125 aa14.8□□□□□ -0.04
ECHDC3-205ENST00000496136 PYGO1Q9Y3Y4 419 aa14.8□□□□□ -0.04
ECHDC3-205ENST00000496136 LINC01549A6NIU2 74 aa14.79□□□□□ -0.04
ECHDC3-205ENST00000496136 ZNF25P17030 456 aaPredicted RBP14.79□□□□□ -0.04
ECHDC3-205ENST00000496136 DGAT2L7PQ6IED9 249 aa14.79□□□□□ -0.04
ECHDC3-205ENST00000496136 SPANXA1Q9NS26 97 aa14.79□□□□□ -0.04
ECHDC3-205ENST00000496136 SMAGPQ0VAQ4 97 aa14.78□□□□□ -0.04
ECHDC3-205ENST00000496136 FAM104AQ969W3 186 aa14.78□□□□□ -0.04
ECHDC3-205ENST00000496136 PDZD11Q5EBL8 140 aa14.78□□□□□ -0.04
ECHDC3-205ENST00000496136 ERASQ7Z444 233 aa14.78□□□□□ -0.04
ECHDC3-205ENST00000496136 OR5A1Q8NGJ0 315 aa14.78□□□□□ -0.04
ECHDC3-205ENST00000496136 TMEM101Q96IK0 257 aa14.78□□□□□ -0.04
ECHDC3-205ENST00000496136 SCGB3A1Q96QR1 104 aa14.78□□□□□ -0.04
ECHDC3-205ENST00000496136 OPRPNQ99935 248 aaPredicted RBP14.78□□□□□ -0.04
ECHDC3-205ENST00000496136 TMA7Q9Y2S6 64 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms