RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 IGHV1-24A0A0C4DH33 117 aa13.36□□□□□ -0.27
ATG3-208ENST00000495756 AMTP48728 403 aa13.36□□□□□ -0.27
ATG3-208ENST00000495756 PRSS3P2Q8NHM4 247 aa13.36□□□□□ -0.27
ATG3-208ENST00000495756 ALMS1Q8TCU4 4167 aa13.35□□□□□ -0.27
ATG3-208ENST00000495756 TRAV8-6A0A0B4J262 113 aa13.35□□□□□ -0.27
ATG3-208ENST00000495756 TCAPO15273 167 aa13.35□□□□□ -0.27
ATG3-208ENST00000495756 LGALS9CQ6DKI2 356 aa13.35□□□□□ -0.27
ATG3-208ENST00000495756 UPK3BQ9BT76 320 aa13.35□□□□□ -0.27
ATG3-208ENST00000495756 WFDC10BQ8IUB3 73 aa13.33□□□□□ -0.28
ATG3-208ENST00000495756 TMEM243Q9BU79 118 aa13.33□□□□□ -0.28
ATG3-208ENST00000495756 CHCHD7Q9BUK0 85 aa13.33□□□□□ -0.28
ATG3-208ENST00000495756 K7EMI3 77 aa13.32□□□□□ -0.28
ATG3-208ENST00000495756 ESDP10768 282 aa13.32□□□□□ -0.28
ATG3-208ENST00000495756 CHCHD5Q9BSY4 110 aa13.32□□□□□ -0.28
ATG3-208ENST00000495756 Q0VG73 95 aa13.31□□□□□ -0.28
ATG3-208ENST00000495756 FA2HQ7L5A8 372 aa13.31□□□□□ -0.28
ATG3-208ENST00000495756 LINC00476Q8WZB0 136 aa13.31□□□□□ -0.28
ATG3-208ENST00000495756 LINC01546A6NGU7 62 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 C1orf196B1AJZ1 125 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 HIST1H2BKO60814 126 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 HIST1H2BJP06899 126 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 HIST1H2BOP23527 126 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 HIST1H2BBP33778 126 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 HIST1H2BDP58876 126 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 HIST1H2BCP62807 126 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 LAGE3Q14657 143 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 HIST2H2BEQ16778 126 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.3□□□□□ -0.28
ATG3-208ENST00000495756 HIST1H2BHQ93079 126 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 HIST1H2BNQ99877 126 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 HIST1H2BMQ99879 126 aa13.3□□□□□ -0.28
ATG3-208ENST00000495756 NIT1Q86X76 327 aa13.29□□□□□ -0.28
ATG3-208ENST00000495756 URB1-AS1Q96HZ7 61 aa13.29□□□□□ -0.28
ATG3-208ENST00000495756 SIVA1O15304 175 aa13.29□□□□□ -0.28
ATG3-208ENST00000495756 LY6G6CO95867 125 aa13.29□□□□□ -0.28
ATG3-208ENST00000495756 LINC00614P0C842 121 aa13.29□□□□□ -0.28
ATG3-208ENST00000495756 RAB5BP61020 215 aa13.29□□□□□ -0.28
ATG3-208ENST00000495756 GAGE6Q13070 117 aa13.29□□□□□ -0.28
ATG3-208ENST00000495756 ORMDL2Q53FV1 153 aa13.29□□□□□ -0.28
ATG3-208ENST00000495756 BAGE3Q86Y29 109 aa13.29□□□□□ -0.28
ATG3-208ENST00000495756 Q9H8V8 135 aa13.29□□□□□ -0.28
ATG3-208ENST00000495756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.28□□□□□ -0.28
ATG3-208ENST00000495756 IGKV2-29A2NJV5 120 aaPredicted RBP13.28□□□□□ -0.28
ATG3-208ENST00000495756 UBE2L6O14933 153 aa13.28□□□□□ -0.28
ATG3-208ENST00000495756 RNASEKQ6P5S7 137 aaKnown RBP13.28□□□□□ -0.28
ATG3-208ENST00000495756 C20orf203Q8NBC4 194 aa13.28□□□□□ -0.28
ATG3-208ENST00000495756 AP5S1Q9NUS5 200 aa13.28□□□□□ -0.28
ATG3-208ENST00000495756 TMEM262E9PQX1 116 aa13.27□□□□□ -0.29
ATG3-208ENST00000495756 H7C423 109 aa13.27□□□□□ -0.29
ATG3-208ENST00000495756 DNAH10OSP0CZ25 163 aa13.26□□□□□ -0.29
ATG3-208ENST00000495756 PKIAP61925 76 aa13.26□□□□□ -0.29
ATG3-208ENST00000495756 Q8N3U1 123 aa13.26□□□□□ -0.29
ATG3-208ENST00000495756 A0A087WX48 190 aa13.25□□□□□ -0.29
ATG3-208ENST00000495756 LINC01556Q5JQF7 62 aa13.25□□□□□ -0.29
ATG3-208ENST00000495756 CHCHD1Q96BP2 118 aaKnown RBP13.25□□□□□ -0.29
ATG3-208ENST00000495756 RPL39P62891 51 aaKnown RBP13.24□□□□□ -0.29
ATG3-208ENST00000495756 MPV17L2Q567V2 206 aa13.24□□□□□ -0.29
ATG3-208ENST00000495756 TMEM18Q96B42 140 aa13.24□□□□□ -0.29
ATG3-208ENST00000495756 KMT2AQ03164 3969 aa13.24□□□□□ -0.29
ATG3-208ENST00000495756 FGF6P10767 208 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 SACSQ9NZJ4 4579 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 SERF1AO75920 110 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 IGHV3-30P01768 117 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 IGHV3-33P01772 117 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 IGHV3-30-3P0DP02 117 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 IGHV3-30-5P0DP03 117 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 BTF3P20290 206 aaKnown RBP13.23□□□□□ -0.29
ATG3-208ENST00000495756 G0S2P27469 103 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 LINC00310P59036 64 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 RBX1P62877 108 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 AMMECR1LQ6DCA0 310 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 C2orf66Q6UXQ4 117 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 Q8N976 141 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 KMT2CQ8NEZ4 4911 aaKnown RBP13.23□□□□□ -0.29
ATG3-208ENST00000495756 CYSLTR1Q9Y271 337 aa13.23□□□□□ -0.29
ATG3-208ENST00000495756 DNAH6Q9C0G6 4158 aa13.22□□□□□ -0.29
ATG3-208ENST00000495756 A0A1B0GUV1 79 aa13.22□□□□□ -0.29
ATG3-208ENST00000495756 MRPL52Q86TS9 123 aaKnown RBP13.22□□□□□ -0.29
ATG3-208ENST00000495756 UBE2D4Q9Y2X8 147 aa13.22□□□□□ -0.29
ATG3-208ENST00000495756 LCE6AA0A183 80 aa13.21□□□□□ -0.3
ATG3-208ENST00000495756 ZNF25P17030 456 aaPredicted RBP13.21□□□□□ -0.3
ATG3-208ENST00000495756 HSBP1O75506 76 aa13.2□□□□□ -0.3
ATG3-208ENST00000495756 SMAGPQ0VAQ4 97 aa13.2□□□□□ -0.3
ATG3-208ENST00000495756 PMCHL1Q16048 86 aa13.2□□□□□ -0.3
ATG3-208ENST00000495756 TIMM21Q9BVV7 248 aa13.2□□□□□ -0.3
ATG3-208ENST00000495756 IGLV4-60A0A075B6I1 120 aa13.19□□□□□ -0.3
ATG3-208ENST00000495756 A0A096LNJ9 63 aa13.19□□□□□ -0.3
ATG3-208ENST00000495756 TOMM6Q96B49 74 aa13.19□□□□□ -0.3
ATG3-208ENST00000495756 TMEM101Q96IK0 257 aa13.19□□□□□ -0.3
ATG3-208ENST00000495756 SPANXA1Q9NS26 97 aa13.19□□□□□ -0.3
ATG3-208ENST00000495756 CSDC2Q9Y534 153 aaKnown RBP13.19□□□□□ -0.3
ATG3-208ENST00000495756 TRAV9-2A0A087WT02 112 aa13.18□□□□□ -0.3
ATG3-208ENST00000495756 NBDYA0A0U1RRE5 68 aa13.18□□□□□ -0.3
ATG3-208ENST00000495756 K7EP13 123 aa13.18□□□□□ -0.3
ATG3-208ENST00000495756 NUPR1O60356 82 aa13.18□□□□□ -0.3
ATG3-208ENST00000495756 HBDP02042 147 aa13.18□□□□□ -0.3
ATG3-208ENST00000495756 NDUFA6P56556 154 aa13.18□□□□□ -0.3
ATG3-208ENST00000495756 COA6Q5JTJ3 125 aaKnown RBP13.18□□□□□ -0.3
ATG3-208ENST00000495756 DGAT2L7PQ6IED9 249 aa13.18□□□□□ -0.3
ATG3-208ENST00000495756 OR5A1Q8NGJ0 315 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms