RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 TIMM21Q9BVV7 248 aa6.23□□□□□ -1.41
EPHA4-213ENST00000495693 CST9LQ9H4G1 147 aa6.23□□□□□ -1.41
EPHA4-213ENST00000495693 FLNCQ14315 2725 aa6.22□□□□□ -1.41
EPHA4-213ENST00000495693 TRBV25-1A0A075B6N4 114 aa6.22□□□□□ -1.41
EPHA4-213ENST00000495693 TRGV1A0A0A0MS02 117 aa6.22□□□□□ -1.41
EPHA4-213ENST00000495693 TRAV8-6A0A0B4J262 113 aa6.22□□□□□ -1.41
EPHA4-213ENST00000495693 GTF2H5Q6ZYL4 71 aa6.22□□□□□ -1.41
EPHA4-213ENST00000495693 PCP2Q8IVA1 136 aa6.22□□□□□ -1.41
EPHA4-213ENST00000495693 C1orf158Q8N1D5 194 aa6.22□□□□□ -1.41
EPHA4-213ENST00000495693 PLEKHB2Q96CS7 222 aa6.22□□□□□ -1.41
EPHA4-213ENST00000495693 LRRK2Q5S007 2527 aa6.22□□□□□ -1.41
EPHA4-213ENST00000495693 TRBV7-3A0A075B6L6 115 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 IGHV3OR16-12A0A075B7B8 117 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 H7C423 109 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 K7EQD1 137 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 CRLF1O75462 422 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 SMIM13P0DJ93 91 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 LGALS3P17931 250 aaKnown RBP6.21□□□□□ -1.42
EPHA4-213ENST00000495693 VAMP3Q15836 100 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 CEND1Q8N111 149 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 OVOL2Q9BRP0 275 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 PRADC1Q9BSG0 188 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 TM2D2Q9BX73 214 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 MRPL16Q9NX20 251 aaKnown RBP6.21□□□□□ -1.42
EPHA4-213ENST00000495693 MUC4Q99102 2169 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 PTPN13Q12923 2485 aa6.21□□□□□ -1.42
EPHA4-213ENST00000495693 TRBV6-4A0A1B0GX49 114 aa6.2□□□□□ -1.42
EPHA4-213ENST00000495693 ZNF815PA8K554 130 aa6.2□□□□□ -1.42
EPHA4-213ENST00000495693 INAFM1C9JVW0 142 aa6.2□□□□□ -1.42
EPHA4-213ENST00000495693 APOC4P55056 127 aa6.2□□□□□ -1.42
EPHA4-213ENST00000495693 MRPS36P82909 103 aaKnown RBP6.2□□□□□ -1.42
EPHA4-213ENST00000495693 UBE2V1Q13404 147 aa6.2□□□□□ -1.42
EPHA4-213ENST00000495693 TMEM170BQ5T4T1 132 aa6.2□□□□□ -1.42
EPHA4-213ENST00000495693 DGAT2L7PQ6IED9 249 aa6.2□□□□□ -1.42
EPHA4-213ENST00000495693 SCGB1D4Q6XE38 83 aa6.2□□□□□ -1.42
EPHA4-213ENST00000495693 NEGR1Q7Z3B1 354 aa6.2□□□□□ -1.42
EPHA4-213ENST00000495693 GTSF1LQ9H1H1 148 aa6.2□□□□□ -1.42
EPHA4-213ENST00000495693 CSDC2Q9Y534 153 aaKnown RBP6.2□□□□□ -1.42
EPHA4-213ENST00000495693 USP9YO00507 2555 aaPredicted RBP6.2□□□□□ -1.42
EPHA4-213ENST00000495693 DOPEY2Q9Y3R5 2298 aa6.19□□□□□ -1.42
EPHA4-213ENST00000495693 IGLV4-69A0A075B6H9 119 aa6.19□□□□□ -1.42
EPHA4-213ENST00000495693 IGLV4-3A0A075B6K6 122 aa6.19□□□□□ -1.42
EPHA4-213ENST00000495693 TRGV2A0A075B6R0 118 aa6.19□□□□□ -1.42
EPHA4-213ENST00000495693 IGKV2D-26A0A0A0MRZ7 120 aa6.19□□□□□ -1.42
EPHA4-213ENST00000495693 TAX1BP3O14907 124 aa6.19□□□□□ -1.42
EPHA4-213ENST00000495693 LEPROTO15243 131 aa6.19□□□□□ -1.42
EPHA4-213ENST00000495693 RPL39P62891 51 aaKnown RBP6.19□□□□□ -1.42
EPHA4-213ENST00000495693 LYRM7Q5U5X0 104 aa6.19□□□□□ -1.42
EPHA4-213ENST00000495693 KIR2DL5BQ8NHK3 375 aa6.19□□□□□ -1.42
EPHA4-213ENST00000495693 LINC00476Q8WZB0 136 aa6.19□□□□□ -1.42
EPHA4-213ENST00000495693 AMELXQ99217 191 aa6.19□□□□□ -1.42
EPHA4-213ENST00000495693 HIST1H4GQ99525 98 aa6.19□□□□□ -1.42
EPHA4-213ENST00000495693 SPANXB1Q9NS25 103 aaPredicted RBP6.19□□□□□ -1.42
EPHA4-213ENST00000495693 KMT2BQ9UMN6 2715 aaPredicted RBP6.18□□□□□ -1.42
EPHA4-213ENST00000495693 IGHV3-73A0A0B4J1V6 119 aa6.18□□□□□ -1.42
EPHA4-213ENST00000495693 TINCRA0A1B0GVN0 87 aa6.18□□□□□ -1.42
EPHA4-213ENST00000495693 P0DMU3 169 aa6.18□□□□□ -1.42
EPHA4-213ENST00000495693 FAM231AP0DMU4 169 aa6.18□□□□□ -1.42
EPHA4-213ENST00000495693 FAM231CP0DMU5 169 aa6.18□□□□□ -1.42
EPHA4-213ENST00000495693 OR5A1Q8NGJ0 315 aa6.18□□□□□ -1.42
EPHA4-213ENST00000495693 UTP20O75691 2785 aaKnown RBP6.18□□□□□ -1.42
EPHA4-213ENST00000495693 ASH1LQ9NR48 2969 aaKnown RBP6.18□□□□□ -1.42
EPHA4-213ENST00000495693 ZFYVE26Q68DK2 2539 aa6.18□□□□□ -1.42
EPHA4-213ENST00000495693 CSMD1Q96PZ7 3565 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 VPS13CQ709C8 3753 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 TMEM238C9JI98 176 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 J3QQQ9 107 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 UBE2L6O14933 153 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 FABP2P12104 132 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 HERVK_113P63121 156 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 SRSF9Q13242 221 aaKnown RBP eCLIP6.17□□□□□ -1.42
EPHA4-213ENST00000495693 CSNK1G2-AS1Q8NCQ2 148 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 ZNRF2Q8NHG8 242 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 COPS9Q8WXC6 57 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 TMEM101Q96IK0 257 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 SMR3AQ99954 134 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 CITED1Q99966 193 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 CHCHD7Q9BUK0 85 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 NOP10Q9NPE3 64 aaKnown RBP6.17□□□□□ -1.42
EPHA4-213ENST00000495693 TP73-AS1Q9UF72 201 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 UBE2D4Q9Y2X8 147 aa6.17□□□□□ -1.42
EPHA4-213ENST00000495693 EPG5Q9HCE0 2579 aa6.16□□□□□ -1.42
EPHA4-213ENST00000495693 TRGV4A0A0C4DH28 118 aa6.16□□□□□ -1.42
EPHA4-213ENST00000495693 TMEM223A0PJW6 202 aa6.16□□□□□ -1.42
EPHA4-213ENST00000495693 LYRM9A8MSI8 78 aa6.16□□□□□ -1.42
EPHA4-213ENST00000495693 RPL35AP18077 110 aaKnown RBP6.16□□□□□ -1.42
EPHA4-213ENST00000495693 TIRAPP58753 221 aa6.16□□□□□ -1.42
EPHA4-213ENST00000495693 UBE2D3P61077 147 aa6.16□□□□□ -1.42
EPHA4-213ENST00000495693 UBE2D2P62837 147 aa6.16□□□□□ -1.42
EPHA4-213ENST00000495693 Q6ZVH6 145 aa6.16□□□□□ -1.42
EPHA4-213ENST00000495693 GEMIN7Q9H840 131 aaKnown RBP6.16□□□□□ -1.42
EPHA4-213ENST00000495693 TEX48A0A1B0GUV7 120 aa6.15□□□□□ -1.42
EPHA4-213ENST00000495693 GAGE10A6NGK3 116 aa6.15□□□□□ -1.42
EPHA4-213ENST00000495693 ZNF22P17026 224 aaPredicted RBP6.15□□□□□ -1.42
EPHA4-213ENST00000495693 TCTAP57738 103 aa6.15□□□□□ -1.42
EPHA4-213ENST00000495693 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.42
EPHA4-213ENST00000495693 Q6ZTI0 123 aa6.15□□□□□ -1.42
EPHA4-213ENST00000495693 FAM19A3Q7Z5A8 133 aa6.15□□□□□ -1.42
EPHA4-213ENST00000495693 SVEP1Q4LDE5 3571 aa6.14□□□□□ -1.43
EPHA4-213ENST00000495693 APCP25054 2843 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms