RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 RNF185Q96GF1 192 aa7.43□□□□□ -1.22
RAPGEF3-213ENST00000494764 DPH3P1Q9H4G8 78 aa7.43□□□□□ -1.22
RAPGEF3-213ENST00000494764 MANBALQ9NQG1 85 aa7.43□□□□□ -1.22
RAPGEF3-213ENST00000494764 GNG13Q9P2W3 67 aa7.43□□□□□ -1.22
RAPGEF3-213ENST00000494764 TNXBP22105 4242 aa7.43□□□□□ -1.22
RAPGEF3-213ENST00000494764 SLPIP03973 132 aa7.42□□□□□ -1.22
RAPGEF3-213ENST00000494764 TRGC1P0CF51 173 aa7.42□□□□□ -1.22
RAPGEF3-213ENST00000494764 SULT1A2P50226 295 aa7.42□□□□□ -1.22
RAPGEF3-213ENST00000494764 CCL20P78556 96 aa7.42□□□□□ -1.22
RAPGEF3-213ENST00000494764 CENPWQ5EE01 88 aa7.42□□□□□ -1.22
RAPGEF3-213ENST00000494764 CFAP161Q6P656 301 aa7.42□□□□□ -1.22
RAPGEF3-213ENST00000494764 PGLYRP4Q96LB8 373 aa7.42□□□□□ -1.22
RAPGEF3-213ENST00000494764 RAB19A4D1S5 217 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 C19orf71A6NCJ1 209 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 TEX46H3BTG2 121 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 BCL2L11O43521 198 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 IFNA1P01562 189 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 MT1HL1P0DM35 61 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 NTF3P20783 257 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 AMTP48728 403 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 GNG4P50150 75 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 COTL1Q14019 142 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 LYZL1Q6UWQ5 148 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 C11orf52Q96A22 123 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 GFRA4Q9GZZ7 299 aa7.41□□□□□ -1.22
RAPGEF3-213ENST00000494764 IGKV3OR2-268A0A0C4DH90 116 aa7.4□□□□□ -1.22
RAPGEF3-213ENST00000494764 GAGE12HA6NDE8 117 aa7.4□□□□□ -1.22
RAPGEF3-213ENST00000494764 CHTF8P0CG12 524 aa7.4□□□□□ -1.22
RAPGEF3-213ENST00000494764 SPACA4Q8TDM5 124 aa7.4□□□□□ -1.22
RAPGEF3-213ENST00000494764 C7orf33Q8WU49 177 aa7.4□□□□□ -1.22
RAPGEF3-213ENST00000494764 BIN3Q9NQY0 253 aa7.4□□□□□ -1.22
RAPGEF3-213ENST00000494764 RPS10P46783 165 aaKnown RBP7.39□□□□□ -1.23
RAPGEF3-213ENST00000494764 COX6A2Q02221 97 aa7.39□□□□□ -1.23
RAPGEF3-213ENST00000494764 TWIST1Q15672 202 aa7.39□□□□□ -1.23
RAPGEF3-213ENST00000494764 C9orf62Q8N4C0 152 aa7.39□□□□□ -1.23
RAPGEF3-213ENST00000494764 SMIM12Q96EX1 92 aa7.39□□□□□ -1.23
RAPGEF3-213ENST00000494764 MED9Q9NWA0 146 aa7.39□□□□□ -1.23
RAPGEF3-213ENST00000494764 PLAC8Q9NZF1 115 aa7.39□□□□□ -1.23
RAPGEF3-213ENST00000494764 TRAV1-1A0A0B4J248 108 aa7.38□□□□□ -1.23
RAPGEF3-213ENST00000494764 PHOX2AO14813 284 aa7.38□□□□□ -1.23
RAPGEF3-213ENST00000494764 PDE6DO43924 150 aa7.38□□□□□ -1.23
RAPGEF3-213ENST00000494764 GTSF1Q8WW33 167 aa7.38□□□□□ -1.23
RAPGEF3-213ENST00000494764 LINC00862A6NCI5 91 aa7.37□□□□□ -1.23
RAPGEF3-213ENST00000494764 NDUFS6O75380 124 aaKnown RBP7.37□□□□□ -1.23
RAPGEF3-213ENST00000494764 MEF2BQ02080 365 aaPredicted RBP7.37□□□□□ -1.23
RAPGEF3-213ENST00000494764 MAJINQ3KP22 176 aa7.37□□□□□ -1.23
RAPGEF3-213ENST00000494764 AMMECR1LQ6DCA0 310 aa7.37□□□□□ -1.23
RAPGEF3-213ENST00000494764 EIF5AL1Q6IS14 154 aaKnown RBP7.37□□□□□ -1.23
RAPGEF3-213ENST00000494764 TEX261Q6UWH6 196 aa7.37□□□□□ -1.23
RAPGEF3-213ENST00000494764 C15orf56Q8N910 161 aa7.37□□□□□ -1.23
RAPGEF3-213ENST00000494764 NUDT10Q8NFP7 164 aa7.37□□□□□ -1.23
RAPGEF3-213ENST00000494764 NUDT11Q96G61 164 aa7.37□□□□□ -1.23
RAPGEF3-213ENST00000494764 LRP2P98164 4655 aa7.36□□□□□ -1.23
RAPGEF3-213ENST00000494764 IGKV2-24A0A0C4DH68 120 aa7.36□□□□□ -1.23
RAPGEF3-213ENST00000494764 HIGD2BQ4VC39 106 aa7.36□□□□□ -1.23
RAPGEF3-213ENST00000494764 RNASEKQ6P5S7 137 aaKnown RBP7.36□□□□□ -1.23
RAPGEF3-213ENST00000494764 SMIM15Q7Z3B0 74 aa7.36□□□□□ -1.23
RAPGEF3-213ENST00000494764 GATD1Q8NB37 220 aa7.36□□□□□ -1.23
RAPGEF3-213ENST00000494764 PRSS3P2Q8NHM4 247 aa7.36□□□□□ -1.23
RAPGEF3-213ENST00000494764 CLLU1Q5K131 121 aa7.35□□□□□ -1.23
RAPGEF3-213ENST00000494764 STPG4Q8N801 248 aa7.35□□□□□ -1.23
RAPGEF3-213ENST00000494764 LYPD6BQ8NI32 183 aa7.35□□□□□ -1.23
RAPGEF3-213ENST00000494764 CHCHD10Q8WYQ3 142 aaPredicted RBP7.35□□□□□ -1.23
RAPGEF3-213ENST00000494764 TRBV20OR9-2A0A075B6H5 130 aa7.34□□□□□ -1.23
RAPGEF3-213ENST00000494764 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.34□□□□□ -1.23
RAPGEF3-213ENST00000494764 TRAV26-2A0A0B4J265 109 aa7.34□□□□□ -1.23
RAPGEF3-213ENST00000494764 IGKV2-29A2NJV5 120 aaPredicted RBP7.34□□□□□ -1.23
RAPGEF3-213ENST00000494764 H7C423 109 aa7.34□□□□□ -1.23
RAPGEF3-213ENST00000494764 NCR2O95944 276 aa7.34□□□□□ -1.23
RAPGEF3-213ENST00000494764 RNF213Q63HN8 5207 aa7.34□□□□□ -1.23
RAPGEF3-213ENST00000494764 APCSP02743 223 aa7.33□□□□□ -1.24
RAPGEF3-213ENST00000494764 PMCHP20382 165 aa7.33□□□□□ -1.24
RAPGEF3-213ENST00000494764 CTRLP40313 264 aa7.33□□□□□ -1.24
RAPGEF3-213ENST00000494764 RPL39LQ96EH5 51 aaKnown RBP7.33□□□□□ -1.24
RAPGEF3-213ENST00000494764 TMEM101Q96IK0 257 aa7.33□□□□□ -1.24
RAPGEF3-213ENST00000494764 LINC01600Q96MT4 127 aa7.33□□□□□ -1.24
RAPGEF3-213ENST00000494764 CNFNQ9BYD5 112 aa7.33□□□□□ -1.24
RAPGEF3-213ENST00000494764 RNASE7Q9H1E1 156 aaKnown RBP7.33□□□□□ -1.24
RAPGEF3-213ENST00000494764 RPP21Q9H633 154 aaKnown RBP7.33□□□□□ -1.24
RAPGEF3-213ENST00000494764 BCL2P10415 239 aa7.32□□□□□ -1.24
RAPGEF3-213ENST00000494764 FGF6P10767 208 aa7.32□□□□□ -1.24
RAPGEF3-213ENST00000494764 OCC1Q8TAD7 63 aa7.32□□□□□ -1.24
RAPGEF3-213ENST00000494764 BTF3L4Q96K17 158 aa7.32□□□□□ -1.24
RAPGEF3-213ENST00000494764 GVQW2A0A096LPI5 108 aaPredicted RBP7.31□□□□□ -1.24
RAPGEF3-213ENST00000494764 SDHAF1A6NFY7 115 aa7.31□□□□□ -1.24
RAPGEF3-213ENST00000494764 TAGLN2P37802 199 aaKnown RBP7.31□□□□□ -1.24
RAPGEF3-213ENST00000494764 FOXA3P55318 350 aaPredicted RBP7.31□□□□□ -1.24
RAPGEF3-213ENST00000494764 OR5A1Q8NGJ0 315 aa7.31□□□□□ -1.24
RAPGEF3-213ENST00000494764 LINC00474Q9P2X8 69 aa7.31□□□□□ -1.24
RAPGEF3-213ENST00000494764 PKIGQ9Y2B9 76 aa7.31□□□□□ -1.24
RAPGEF3-213ENST00000494764 A0A096LNI7 61 aa7.3□□□□□ -1.24
RAPGEF3-213ENST00000494764 I3L3M4 83 aa7.3□□□□□ -1.24
RAPGEF3-213ENST00000494764 ZNF25P17030 456 aaPredicted RBP7.3□□□□□ -1.24
RAPGEF3-213ENST00000494764 XCL1P47992 114 aa7.3□□□□□ -1.24
RAPGEF3-213ENST00000494764 PRR3P79522 188 aaKnown RBP7.3□□□□□ -1.24
RAPGEF3-213ENST00000494764 FOXI1Q12951 378 aa7.3□□□□□ -1.24
RAPGEF3-213ENST00000494764 COMMD7Q86VX2 200 aa7.3□□□□□ -1.24
RAPGEF3-213ENST00000494764 IGHV1-58A0A0C4DH39 117 aa7.29□□□□□ -1.24
RAPGEF3-213ENST00000494764 LINC00959A0A1B0GUT2 108 aa7.29□□□□□ -1.24
RAPGEF3-213ENST00000494764 K7EN84 100 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms