RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 RNASEKQ6P5S7 137 aaKnown RBP6.11□□□□□ -1.43
UBR4-216ENST00000494503 MBD3L1Q8WWY6 194 aa6.11□□□□□ -1.43
UBR4-216ENST00000494503 A0A1B0GUV1 79 aa6.1□□□□□ -1.43
UBR4-216ENST00000494503 G3V3Q6 166 aa6.1□□□□□ -1.43
UBR4-216ENST00000494503 IFNA1P01562 189 aa6.1□□□□□ -1.43
UBR4-216ENST00000494503 SLPIP03973 132 aa6.1□□□□□ -1.43
UBR4-216ENST00000494503 RPS10P46783 165 aaKnown RBP6.1□□□□□ -1.43
UBR4-216ENST00000494503 GNG4P50150 75 aa6.1□□□□□ -1.43
UBR4-216ENST00000494503 CIRBPQ14011 172 aaKnown RBP6.1□□□□□ -1.43
UBR4-216ENST00000494503 TWIST1Q15672 202 aa6.1□□□□□ -1.43
UBR4-216ENST00000494503 STPG4Q8N801 248 aa6.1□□□□□ -1.43
UBR4-216ENST00000494503 MANBALQ9NQG1 85 aa6.1□□□□□ -1.43
UBR4-216ENST00000494503 NIT2Q9NQR4 276 aa6.1□□□□□ -1.43
UBR4-216ENST00000494503 TRAV26-2A0A0B4J265 109 aa6.09□□□□□ -1.43
UBR4-216ENST00000494503 RAB19A4D1S5 217 aa6.09□□□□□ -1.43
UBR4-216ENST00000494503 NDUFS6O75380 124 aaKnown RBP6.09□□□□□ -1.43
UBR4-216ENST00000494503 IGLC6P0CF74 106 aa6.09□□□□□ -1.43
UBR4-216ENST00000494503 NTF3P20783 257 aa6.09□□□□□ -1.43
UBR4-216ENST00000494503 LYZL1Q6UWQ5 148 aa6.09□□□□□ -1.43
UBR4-216ENST00000494503 C15orf56Q8N910 161 aa6.09□□□□□ -1.43
UBR4-216ENST00000494503 PRSS3P2Q8NHM4 247 aa6.09□□□□□ -1.43
UBR4-216ENST00000494503 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.08□□□□□ -1.44
UBR4-216ENST00000494503 IGKV2-29A2NJV5 120 aaPredicted RBP6.08□□□□□ -1.44
UBR4-216ENST00000494503 F2Z2F3 143 aa6.08□□□□□ -1.44
UBR4-216ENST00000494503 TEX46H3BTG2 121 aa6.08□□□□□ -1.44
UBR4-216ENST00000494503 BCL2L11O43521 198 aa6.08□□□□□ -1.44
UBR4-216ENST00000494503 EIF5AP63241 154 aaKnown RBP6.08□□□□□ -1.44
UBR4-216ENST00000494503 PRR3P79522 188 aaKnown RBP6.08□□□□□ -1.44
UBR4-216ENST00000494503 ZNF345Q14585 488 aa6.08□□□□□ -1.44
UBR4-216ENST00000494503 ODF1Q14990 250 aa6.08□□□□□ -1.44
UBR4-216ENST00000494503 RGS21Q2M5E4 152 aa6.08□□□□□ -1.44
UBR4-216ENST00000494503 CHCHD10Q8WYQ3 142 aaPredicted RBP6.08□□□□□ -1.44
UBR4-216ENST00000494503 PGLYRP4Q96LB8 373 aa6.08□□□□□ -1.44
UBR4-216ENST00000494503 PLAC8Q9NZF1 115 aa6.08□□□□□ -1.44
UBR4-216ENST00000494503 APCSP02743 223 aa6.07□□□□□ -1.44
UBR4-216ENST00000494503 XCL1P47992 114 aa6.07□□□□□ -1.44
UBR4-216ENST00000494503 CCL20P78556 96 aa6.07□□□□□ -1.44
UBR4-216ENST00000494503 SMIM15Q7Z3B0 74 aa6.07□□□□□ -1.44
UBR4-216ENST00000494503 BATF3Q9NR55 127 aa6.07□□□□□ -1.44
UBR4-216ENST00000494503 MED9Q9NWA0 146 aa6.07□□□□□ -1.44
UBR4-216ENST00000494503 A0A096LNI7 61 aa6.06□□□□□ -1.44
UBR4-216ENST00000494503 REG3GQ6UW15 175 aa6.06□□□□□ -1.44
UBR4-216ENST00000494503 Q6ZNX1 250 aa6.06□□□□□ -1.44
UBR4-216ENST00000494503 C11orf52Q96A22 123 aa6.06□□□□□ -1.44
UBR4-216ENST00000494503 LINC00526Q96FQ7 95 aa6.06□□□□□ -1.44
UBR4-216ENST00000494503 TMEM101Q96IK0 257 aa6.06□□□□□ -1.44
UBR4-216ENST00000494503 BTF3L4Q96K17 158 aa6.06□□□□□ -1.44
UBR4-216ENST00000494503 BIN3Q9NQY0 253 aa6.06□□□□□ -1.44
UBR4-216ENST00000494503 C19orf71A6NCJ1 209 aa6.05□□□□□ -1.44
UBR4-216ENST00000494503 FGF6P10767 208 aa6.05□□□□□ -1.44
UBR4-216ENST00000494503 MEF2BQ02080 365 aaPredicted RBP6.05□□□□□ -1.44
UBR4-216ENST00000494503 GATD1Q8NB37 220 aa6.05□□□□□ -1.44
UBR4-216ENST00000494503 RPL39LQ96EH5 51 aaKnown RBP6.05□□□□□ -1.44
UBR4-216ENST00000494503 GVQW2A0A096LPI5 108 aaPredicted RBP6.04□□□□□ -1.44
UBR4-216ENST00000494503 PDE6DO43924 150 aa6.04□□□□□ -1.44
UBR4-216ENST00000494503 PMCHP20382 165 aa6.04□□□□□ -1.44
UBR4-216ENST00000494503 SMIM12Q96EX1 92 aa6.04□□□□□ -1.44
UBR4-216ENST00000494503 CARD19Q96LW7 228 aa6.04□□□□□ -1.44
UBR4-216ENST00000494503 LINC01600Q96MT4 127 aa6.04□□□□□ -1.44
UBR4-216ENST00000494503 RNASE7Q9H1E1 156 aaKnown RBP6.04□□□□□ -1.44
UBR4-216ENST00000494503 RPP21Q9H633 154 aaKnown RBP6.04□□□□□ -1.44
UBR4-216ENST00000494503 LINC00474Q9P2X8 69 aa6.04□□□□□ -1.44
UBR4-216ENST00000494503 PKIGQ9Y2B9 76 aa6.04□□□□□ -1.44
UBR4-216ENST00000494503 SDHAF1A6NFY7 115 aa6.03□□□□□ -1.44
UBR4-216ENST00000494503 HMSDA8MTL9 139 aa6.03□□□□□ -1.44
UBR4-216ENST00000494503 ZNF561-AS1K7EIQ3 104 aa6.03□□□□□ -1.44
UBR4-216ENST00000494503 CCL25O15444 150 aa6.03□□□□□ -1.44
UBR4-216ENST00000494503 CTRLP40313 264 aa6.03□□□□□ -1.44
UBR4-216ENST00000494503 EIF5AL1Q6IS14 154 aaKnown RBP6.03□□□□□ -1.44
UBR4-216ENST00000494503 NUDT10Q8NFP7 164 aa6.03□□□□□ -1.44
UBR4-216ENST00000494503 OR5A1Q8NGJ0 315 aa6.03□□□□□ -1.44
UBR4-216ENST00000494503 NUDT11Q96G61 164 aa6.03□□□□□ -1.44
UBR4-216ENST00000494503 LRP2P98164 4655 aa6.02□□□□□ -1.45
UBR4-216ENST00000494503 TRBV20OR9-2A0A075B6H5 130 aa6.02□□□□□ -1.45
UBR4-216ENST00000494503 IGHV1-58A0A0C4DH39 117 aa6.02□□□□□ -1.45
UBR4-216ENST00000494503 A0A0J9YXV3 536 aa6.02□□□□□ -1.45
UBR4-216ENST00000494503 NCR2O95944 276 aa6.02□□□□□ -1.45
UBR4-216ENST00000494503 BCL2P10415 239 aa6.02□□□□□ -1.45
UBR4-216ENST00000494503 FOXA3P55318 350 aaPredicted RBP6.02□□□□□ -1.45
UBR4-216ENST00000494503 FOXI1Q12951 378 aa6.02□□□□□ -1.45
UBR4-216ENST00000494503 GAGE2BQ13066 116 aa6.02□□□□□ -1.45
UBR4-216ENST00000494503 SS18Q15532 418 aa6.02□□□□□ -1.45
UBR4-216ENST00000494503 C4orf48Q5BLP8 95 aa6.02□□□□□ -1.45
UBR4-216ENST00000494503 SPINK6Q6UWN8 80 aa6.02□□□□□ -1.45
UBR4-216ENST00000494503 C9orf62Q8N4C0 152 aa6.02□□□□□ -1.45
UBR4-216ENST00000494503 H7C423 109 aa6.01□□□□□ -1.45
UBR4-216ENST00000494503 I3L3M4 83 aa6.01□□□□□ -1.45
UBR4-216ENST00000494503 ZNF25P17030 456 aaPredicted RBP6.01□□□□□ -1.45
UBR4-216ENST00000494503 MALP21145 153 aa6.01□□□□□ -1.45
UBR4-216ENST00000494503 CEBPGP53567 150 aa6.01□□□□□ -1.45
UBR4-216ENST00000494503 Q6ZRP5 223 aa6.01□□□□□ -1.45
UBR4-216ENST00000494503 BORCS7Q96B45 105 aa6.01□□□□□ -1.45
UBR4-216ENST00000494503 MRAP2Q96G30 205 aa6.01□□□□□ -1.45
UBR4-216ENST00000494503 TMEM242Q9NWH2 141 aa6.01□□□□□ -1.45
UBR4-216ENST00000494503 RNF213Q63HN8 5207 aa6.01□□□□□ -1.45
UBR4-216ENST00000494503 TRAV1-1A0A0B4J248 108 aa6□□□□□ -1.45
UBR4-216ENST00000494503 LINC00959A0A1B0GUT2 108 aa6□□□□□ -1.45
UBR4-216ENST00000494503 SYCNQ0VAF6 134 aa6□□□□□ -1.45
UBR4-216ENST00000494503 TEX261Q6UWH6 196 aa6□□□□□ -1.45
UBR4-216ENST00000494503 GATCO43716 136 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms