RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 X6R8D5 127 aa11.78□□□□□ -0.52
ATG4B-225ENST00000494465 PRIMA1Q86XR5 153 aa11.78□□□□□ -0.52
ATG4B-225ENST00000494465 PCP2Q8IVA1 136 aa11.78□□□□□ -0.52
ATG4B-225ENST00000494465 PMVKQ15126 192 aa11.77□□□□□ -0.52
ATG4B-225ENST00000494465 OPRPNQ99935 248 aaPredicted RBP11.77□□□□□ -0.52
ATG4B-225ENST00000494465 CHCHD7Q9BUK0 85 aa11.77□□□□□ -0.52
ATG4B-225ENST00000494465 CST9LQ9H4G1 147 aa11.77□□□□□ -0.52
ATG4B-225ENST00000494465 IGLV4-69A0A075B6H9 119 aa11.77□□□□□ -0.53
ATG4B-225ENST00000494465 K7EQD1 137 aa11.77□□□□□ -0.53
ATG4B-225ENST00000494465 NMUP48645 174 aa11.77□□□□□ -0.53
ATG4B-225ENST00000494465 SLC25A29Q8N8R3 303 aa11.77□□□□□ -0.53
ATG4B-225ENST00000494465 CMYA5Q8N3K9 4069 aa11.77□□□□□ -0.53
ATG4B-225ENST00000494465 IGHV3-38A0A0C4DH36 116 aa11.76□□□□□ -0.53
ATG4B-225ENST00000494465 KIR2DL5BQ8NHK3 375 aa11.76□□□□□ -0.53
ATG4B-225ENST00000494465 PHLDA1Q8WV24 401 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-225ENST00000494465 FAM104AQ969W3 186 aa11.76□□□□□ -0.53
ATG4B-225ENST00000494465 NBEAL2Q6ZNJ1 2754 aa11.76□□□□□ -0.53
ATG4B-225ENST00000494465 TRGV2A0A075B6R0 118 aa11.76□□□□□ -0.53
ATG4B-225ENST00000494465 TRBV10-1A0A0K0K1A3 114 aa11.76□□□□□ -0.53
ATG4B-225ENST00000494465 DLEU1O43261 78 aa11.76□□□□□ -0.53
ATG4B-225ENST00000494465 BATFQ16520 125 aa11.76□□□□□ -0.53
ATG4B-225ENST00000494465 TRBV7-3A0A075B6L6 115 aa11.75□□□□□ -0.53
ATG4B-225ENST00000494465 ZNRF2Q8NHG8 242 aa11.75□□□□□ -0.53
ATG4B-225ENST00000494465 STAB1Q9NY15 2570 aa11.75□□□□□ -0.53
ATG4B-225ENST00000494465 EMP1P54849 157 aa11.75□□□□□ -0.53
ATG4B-225ENST00000494465 IGLV4-3A0A075B6K6 122 aa11.74□□□□□ -0.53
ATG4B-225ENST00000494465 A0A1B0GV90 55 aa11.74□□□□□ -0.53
ATG4B-225ENST00000494465 HINT1P49773 126 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-225ENST00000494465 LINC00612Q8N6U2 182 aa11.74□□□□□ -0.53
ATG4B-225ENST00000494465 TTTY13Q9BZ97 58 aa11.74□□□□□ -0.53
ATG4B-225ENST00000494465 PYGO1Q9Y3Y4 419 aa11.74□□□□□ -0.53
ATG4B-225ENST00000494465 SMIM9A6NGZ8 99 aa11.74□□□□□ -0.53
ATG4B-225ENST00000494465 C11orf86A6NJI1 115 aa11.73□□□□□ -0.53
ATG4B-225ENST00000494465 CIDEAO60543 219 aa11.73□□□□□ -0.53
ATG4B-225ENST00000494465 COTL1Q14019 142 aa11.73□□□□□ -0.53
ATG4B-225ENST00000494465 APOC4P55056 127 aa11.72□□□□□ -0.53
ATG4B-225ENST00000494465 MPV17L2Q567V2 206 aa11.72□□□□□ -0.53
ATG4B-225ENST00000494465 UBE2D3P61077 147 aa11.72□□□□□ -0.53
ATG4B-225ENST00000494465 UBE2D2P62837 147 aa11.72□□□□□ -0.53
ATG4B-225ENST00000494465 RPL36AP83881 106 aaKnown RBP11.72□□□□□ -0.53
ATG4B-225ENST00000494465 DEFB135Q30KP9 77 aa11.72□□□□□ -0.53
ATG4B-225ENST00000494465 C3orf56Q8N813 242 aa11.72□□□□□ -0.53
ATG4B-225ENST00000494465 RPL36ALQ969Q0 106 aaKnown RBP11.72□□□□□ -0.53
ATG4B-225ENST00000494465 TRBV6-4A0A1B0GX49 114 aa11.71□□□□□ -0.53
ATG4B-225ENST00000494465 FHL2Q14192 279 aa11.71□□□□□ -0.53
ATG4B-225ENST00000494465 OXLD1Q5BKU9 147 aa11.71□□□□□ -0.53
ATG4B-225ENST00000494465 CEMP1Q6PRD7 247 aaPredicted RBP11.71□□□□□ -0.53
ATG4B-225ENST00000494465 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.71□□□□□ -0.54
ATG4B-225ENST00000494465 IGKV2-29A2NJV5 120 aaPredicted RBP11.71□□□□□ -0.54
ATG4B-225ENST00000494465 UBE2D4Q9Y2X8 147 aa11.71□□□□□ -0.54
ATG4B-225ENST00000494465 SIVA1O15304 175 aa11.7□□□□□ -0.54
ATG4B-225ENST00000494465 IGHV4-30-4P0DP06 118 aa11.7□□□□□ -0.54
ATG4B-225ENST00000494465 SHISA2Q6UWI4 295 aa11.7□□□□□ -0.54
ATG4B-225ENST00000494465 GAGE12JA6NER3 117 aa11.7□□□□□ -0.54
ATG4B-225ENST00000494465 GAGE1Q13065 139 aa11.7□□□□□ -0.54
ATG4B-225ENST00000494465 GAGE4Q13068 117 aa11.7□□□□□ -0.54
ATG4B-225ENST00000494465 GAGE5Q13069 117 aa11.7□□□□□ -0.54
ATG4B-225ENST00000494465 GAGE13Q4V321 117 aa11.7□□□□□ -0.54
ATG4B-225ENST00000494465 AMELXQ99217 191 aa11.7□□□□□ -0.54
ATG4B-225ENST00000494465 LOC100131303A0A0U1RQF7 123 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 PAPPA-AS1Q5QFB9 102 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 NTM-AS1Q6ZSK4 140 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 DAZ4Q86SG3 579 aaKnown RBP11.69□□□□□ -0.54
ATG4B-225ENST00000494465 MAPKAPK5-AS1Q8N8E1 139 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 DAZ3Q9NR90 486 aaKnown RBP11.69□□□□□ -0.54
ATG4B-225ENST00000494465 PKD1L1Q8TDX9 2849 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 NPSP0C0P6 89 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 DEFB130BP0DP73 79 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 DEFB130AP0DP74 79 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 KRTAP10-11P60412 298 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 COL5A1-AS1Q5SY13 56 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 BVES-AS1Q5T3Y7 98 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 NFE4Q86UQ8 179 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 SPANXA1Q9NS26 97 aa11.69□□□□□ -0.54
ATG4B-225ENST00000494465 E9PLD3 99 aa11.68□□□□□ -0.54
ATG4B-225ENST00000494465 VCX2Q9H322 139 aa11.68□□□□□ -0.54
ATG4B-225ENST00000494465 MAST4O15021 2626 aa11.68□□□□□ -0.54
ATG4B-225ENST00000494465 CRYBA4P53673 196 aa11.68□□□□□ -0.54
ATG4B-225ENST00000494465 OR11H2Q8NH07 326 aa11.68□□□□□ -0.54
ATG4B-225ENST00000494465 TRAV8-6A0A0B4J262 113 aa11.67□□□□□ -0.54
ATG4B-225ENST00000494465 C12orf54Q6X4T0 127 aa11.67□□□□□ -0.54
ATG4B-225ENST00000494465 LINC00694P0DN24 101 aa11.66□□□□□ -0.54
ATG4B-225ENST00000494465 EGFEM1PQ0D2K5 195 aa11.66□□□□□ -0.54
ATG4B-225ENST00000494465 PRADC1Q9BSG0 188 aa11.66□□□□□ -0.54
ATG4B-225ENST00000494465 TRBV25-1A0A075B6N4 114 aa11.65□□□□□ -0.54
ATG4B-225ENST00000494465 TMEM97Q5BJF2 176 aa11.65□□□□□ -0.54
ATG4B-225ENST00000494465 RNASE13Q5GAN3 156 aaKnown RBP11.65□□□□□ -0.54
ATG4B-225ENST00000494465 FAM222AQ5U5X8 452 aa11.65□□□□□ -0.54
ATG4B-225ENST00000494465 SBSPONQ8IVN8 264 aa11.65□□□□□ -0.54
ATG4B-225ENST00000494465 CHAC1Q9BUX1 264 aa11.65□□□□□ -0.54
ATG4B-225ENST00000494465 IGHV4-28A0A0C4DH34 117 aa11.65□□□□□ -0.54
ATG4B-225ENST00000494465 Q6ZUT4 128 aa11.65□□□□□ -0.54
ATG4B-225ENST00000494465 Q8NAQ8 132 aa11.65□□□□□ -0.54
ATG4B-225ENST00000494465 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.54
ATG4B-225ENST00000494465 HIGD1BQ9P298 99 aa11.65□□□□□ -0.54
ATG4B-225ENST00000494465 A0A0J9YXV3 536 aa11.64□□□□□ -0.55
ATG4B-225ENST00000494465 LYRM9A8MSI8 78 aa11.64□□□□□ -0.55
ATG4B-225ENST00000494465 DEFB4AO15263 64 aa11.64□□□□□ -0.55
ATG4B-225ENST00000494465 ANK2Q01484 3957 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms