RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 TPPP3Q9BW30 176 aa5.34□□□□□ -1.55
RIF1-211ENST00000494333 RYR1P21817 5038 aa5.34□□□□□ -1.56
RIF1-211ENST00000494333 IGKV2D-24A0A075B6R9 120 aa5.33□□□□□ -1.56
RIF1-211ENST00000494333 TRBV6-8A0A0A6YYG3 113 aa5.33□□□□□ -1.56
RIF1-211ENST00000494333 C19orf71A6NCJ1 209 aa5.33□□□□□ -1.56
RIF1-211ENST00000494333 RBFOX3A6NFN3 312 aa5.33□□□□□ -1.56
RIF1-211ENST00000494333 SMR3BP02814 79 aaPredicted RBP5.33□□□□□ -1.56
RIF1-211ENST00000494333 BCL2P10415 239 aa5.33□□□□□ -1.56
RIF1-211ENST00000494333 RPS20P60866 119 aaKnown RBP5.33□□□□□ -1.56
RIF1-211ENST00000494333 WFDC2Q14508 124 aa5.33□□□□□ -1.56
RIF1-211ENST00000494333 ELOBQ15370 118 aa5.33□□□□□ -1.56
RIF1-211ENST00000494333 FER1L6-AS1Q8NA97 138 aa5.33□□□□□ -1.56
RIF1-211ENST00000494333 BAALCQ8WXS3 180 aa5.33□□□□□ -1.56
RIF1-211ENST00000494333 DNAJC30Q96LL9 226 aa5.33□□□□□ -1.56
RIF1-211ENST00000494333 KIF25-AS1Q9Y6Z4 181 aa5.33□□□□□ -1.56
RIF1-211ENST00000494333 TRBV20OR9-2A0A075B6H5 130 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.32□□□□□ -1.56
RIF1-211ENST00000494333 XKRY2A2RUG3 117 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 P01737 135 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 IGLC6P0CF74 106 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 CAMPP49913 170 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 HAMPP81172 84 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 AKAP14Q86UN6 197 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 FRZBQ92765 325 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 RMI2Q96E14 147 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 SMIM12Q96EX1 92 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 AP1S3Q96PC3 154 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 CHCHD5Q9BSY4 110 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 CHCHD7Q9BUK0 85 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 BIN3Q9NQY0 253 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 VAX2Q9UIW0 290 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 LRP1BQ9NZR2 4599 aa5.32□□□□□ -1.56
RIF1-211ENST00000494333 F2Z2F3 143 aa5.31□□□□□ -1.56
RIF1-211ENST00000494333 MGPP08493 103 aa5.31□□□□□ -1.56
RIF1-211ENST00000494333 TAGLN2P37802 199 aaKnown RBP5.31□□□□□ -1.56
RIF1-211ENST00000494333 CACNG7P62955 275 aa5.31□□□□□ -1.56
RIF1-211ENST00000494333 Q0VG73 95 aa5.31□□□□□ -1.56
RIF1-211ENST00000494333 LYZL1Q6UWQ5 148 aa5.31□□□□□ -1.56
RIF1-211ENST00000494333 NTM-AS1Q6ZSK4 140 aa5.31□□□□□ -1.56
RIF1-211ENST00000494333 C9orf62Q8N4C0 152 aa5.31□□□□□ -1.56
RIF1-211ENST00000494333 TMEM70Q9BUB7 260 aa5.31□□□□□ -1.56
RIF1-211ENST00000494333 HSPG2P98160 4391 aa5.31□□□□□ -1.56
RIF1-211ENST00000494333 M0QY20 66 aa5.3□□□□□ -1.56
RIF1-211ENST00000494333 ANGP03950 147 aaKnown RBP5.3□□□□□ -1.56
RIF1-211ENST00000494333 NTF3P20783 257 aa5.3□□□□□ -1.56
RIF1-211ENST00000494333 MPV17L2Q567V2 206 aa5.3□□□□□ -1.56
RIF1-211ENST00000494333 TMEM97Q5BJF2 176 aa5.3□□□□□ -1.56
RIF1-211ENST00000494333 Q5VSD8 79 aa5.3□□□□□ -1.56
RIF1-211ENST00000494333 ENHOQ6UWT2 76 aa5.3□□□□□ -1.56
RIF1-211ENST00000494333 ALKAL2Q6UX46 152 aa5.3□□□□□ -1.56
RIF1-211ENST00000494333 SMIM29Q86T20 159 aa5.3□□□□□ -1.56
RIF1-211ENST00000494333 C15orf54Q8N8G6 183 aa5.3□□□□□ -1.56
RIF1-211ENST00000494333 Q8N976 141 aa5.3□□□□□ -1.56
RIF1-211ENST00000494333 OCC1Q8TAD7 63 aa5.3□□□□□ -1.56
RIF1-211ENST00000494333 TRBV25-1A0A075B6N4 114 aa5.29□□□□□ -1.56
RIF1-211ENST00000494333 H7C1H1 209 aa5.29□□□□□ -1.56
RIF1-211ENST00000494333 CRPP02741 224 aa5.29□□□□□ -1.56
RIF1-211ENST00000494333 TRGC1P0CF51 173 aa5.29□□□□□ -1.56
RIF1-211ENST00000494333 INAFM2P0DMQ5 153 aa5.29□□□□□ -1.56
RIF1-211ENST00000494333 NKX2-5P52952 324 aaPredicted RBP5.29□□□□□ -1.56
RIF1-211ENST00000494333 GAGE6Q13070 117 aa5.29□□□□□ -1.56
RIF1-211ENST00000494333 LINC01620Q4KN68 170 aa5.29□□□□□ -1.56
RIF1-211ENST00000494333 ATRAIDQ6UW56 229 aa5.29□□□□□ -1.56
RIF1-211ENST00000494333 Q75L30 129 aa5.29□□□□□ -1.56
RIF1-211ENST00000494333 RNASE7Q9H1E1 156 aaKnown RBP5.29□□□□□ -1.56
RIF1-211ENST00000494333 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
RIF1-211ENST00000494333 K7EN84 100 aa5.28□□□□□ -1.56
RIF1-211ENST00000494333 PKIAP61925 76 aa5.28□□□□□ -1.56
RIF1-211ENST00000494333 RBX1P62877 108 aa5.28□□□□□ -1.56
RIF1-211ENST00000494333 RASL11AQ6T310 242 aa5.28□□□□□ -1.56
RIF1-211ENST00000494333 DEFB104AQ8WTQ1 72 aa5.28□□□□□ -1.56
RIF1-211ENST00000494333 DPH3P1Q9H4G8 78 aa5.28□□□□□ -1.56
RIF1-211ENST00000494333 NIT2Q9NQR4 276 aa5.28□□□□□ -1.56
RIF1-211ENST00000494333 IGHV1-24A0A0C4DH33 117 aa5.27□□□□□ -1.57
RIF1-211ENST00000494333 TMEM250H0YL14 139 aa5.27□□□□□ -1.57
RIF1-211ENST00000494333 CTRLP40313 264 aa5.27□□□□□ -1.57
RIF1-211ENST00000494333 CEBPGP53567 150 aa5.27□□□□□ -1.57
RIF1-211ENST00000494333 IQCJQ1A5X6 159 aa5.27□□□□□ -1.57
RIF1-211ENST00000494333 LINC00269Q8N2A0 174 aa5.27□□□□□ -1.57
RIF1-211ENST00000494333 LYPD6BQ8NI32 183 aa5.27□□□□□ -1.57
RIF1-211ENST00000494333 RPP21Q9H633 154 aaKnown RBP5.27□□□□□ -1.57
RIF1-211ENST00000494333 DNAH5Q8TE73 4624 aa5.27□□□□□ -1.57
RIF1-211ENST00000494333 A0A087WYN8 130 aa5.26□□□□□ -1.57
RIF1-211ENST00000494333 GATCO43716 136 aaKnown RBP5.26□□□□□ -1.57
RIF1-211ENST00000494333 HLA-DQA1P01909 254 aa5.26□□□□□ -1.57
RIF1-211ENST00000494333 MIAQ16674 131 aa5.26□□□□□ -1.57
RIF1-211ENST00000494333 CLPSL2Q6UWE3 100 aa5.26□□□□□ -1.57
RIF1-211ENST00000494333 GTSF1Q8WW33 167 aa5.26□□□□□ -1.57
RIF1-211ENST00000494333 CNFNQ9BYD5 112 aa5.26□□□□□ -1.57
RIF1-211ENST00000494333 EIF5A2Q9GZV4 153 aaKnown RBP5.26□□□□□ -1.57
RIF1-211ENST00000494333 PRR34Q9NV39 138 aa5.26□□□□□ -1.57
RIF1-211ENST00000494333 APOBP04114 4563 aaKnown RBP5.25□□□□□ -1.57
RIF1-211ENST00000494333 TRAV26-2A0A0B4J265 109 aa5.25□□□□□ -1.57
RIF1-211ENST00000494333 FOXA3P55318 350 aaPredicted RBP5.25□□□□□ -1.57
RIF1-211ENST00000494333 RPL24P83731 157 aaKnown RBP5.25□□□□□ -1.57
RIF1-211ENST00000494333 REG3AQ06141 175 aa5.25□□□□□ -1.57
RIF1-211ENST00000494333 C14orf177Q52M58 125 aa5.25□□□□□ -1.57
RIF1-211ENST00000494333 Q6ZSA8 131 aa5.25□□□□□ -1.57
RIF1-211ENST00000494333 FAM231DQ6ZW35 169 aa5.25□□□□□ -1.57
RIF1-211ENST00000494333 SMIM15Q7Z3B0 74 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms