RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 FAM231AP0DMU4 169 aa12.25□□□□□ -0.45
BRAT1-206ENST00000493232 FAM231CP0DMU5 169 aa12.25□□□□□ -0.45
BRAT1-206ENST00000493232 CHCHD10Q8WYQ3 142 aaPredicted RBP12.25□□□□□ -0.45
BRAT1-206ENST00000493232 LY6LH3BQJ8 138 aa12.25□□□□□ -0.45
BRAT1-206ENST00000493232 C14orf132Q9NPU4 83 aa12.25□□□□□ -0.45
BRAT1-206ENST00000493232 LTBP2Q14767 1821 aa12.25□□□□□ -0.45
BRAT1-206ENST00000493232 ANKHD1Q8IWZ3 2542 aaKnown RBP12.25□□□□□ -0.45
BRAT1-206ENST00000493232 IGKV2-24A0A0C4DH68 120 aa12.25□□□□□ -0.45
BRAT1-206ENST00000493232 MIFP14174 115 aa12.25□□□□□ -0.45
BRAT1-206ENST00000493232 DEFB131BA0A096LNP1 70 aa12.25□□□□□ -0.45
BRAT1-206ENST00000493232 H0Y9J4 135 aa12.24□□□□□ -0.45
BRAT1-206ENST00000493232 CRYGDP07320 174 aa12.24□□□□□ -0.45
BRAT1-206ENST00000493232 LINC00322Q6ZN03 302 aaPredicted RBP12.24□□□□□ -0.45
BRAT1-206ENST00000493232 KIR2DL5BQ8NHK3 375 aa12.24□□□□□ -0.45
BRAT1-206ENST00000493232 EIF4EBP1Q13541 118 aaPredicted RBP12.24□□□□□ -0.45
BRAT1-206ENST00000493232 Q6ZSV7 163 aa12.24□□□□□ -0.45
BRAT1-206ENST00000493232 TMEM131Q92545 1883 aa12.23□□□□□ -0.45
BRAT1-206ENST00000493232 C11orf71Q6IPW1 123 aa12.23□□□□□ -0.45
BRAT1-206ENST00000493232 ZFAND3Q9H8U3 227 aa12.23□□□□□ -0.45
BRAT1-206ENST00000493232 LINC00467Q9BRT7 94 aa12.23□□□□□ -0.45
BRAT1-206ENST00000493232 INAFM1C9JVW0 142 aa12.23□□□□□ -0.45
BRAT1-206ENST00000493232 C20orf173Q96LM9 149 aa12.22□□□□□ -0.45
BRAT1-206ENST00000493232 C2orf16Q68DN1 1984 aa12.22□□□□□ -0.45
BRAT1-206ENST00000493232 Q6ZPA2 131 aa12.22□□□□□ -0.45
BRAT1-206ENST00000493232 TRBV6-4A0A1B0GX49 114 aa12.21□□□□□ -0.45
BRAT1-206ENST00000493232 NEXN-AS1Q8NBZ9 246 aa12.21□□□□□ -0.45
BRAT1-206ENST00000493232 HIGD2AQ9BW72 106 aa12.21□□□□□ -0.45
BRAT1-206ENST00000493232 TNCP24821 2201 aa12.21□□□□□ -0.45
BRAT1-206ENST00000493232 C1orf229Q6ZS94 237 aaPredicted RBP12.21□□□□□ -0.46
BRAT1-206ENST00000493232 C22orf34Q6ZV56 151 aa12.21□□□□□ -0.46
BRAT1-206ENST00000493232 IBA57-AS1B1ANH7 110 aa12.2□□□□□ -0.46
BRAT1-206ENST00000493232 LINC00643Q86TS7 51 aa12.2□□□□□ -0.46
BRAT1-206ENST00000493232 NOTCH2Q04721 2471 aa12.2□□□□□ -0.46
BRAT1-206ENST00000493232 ADAMTS9Q9P2N4 1935 aa12.2□□□□□ -0.46
BRAT1-206ENST00000493232 IGKV2D-26A0A0A0MRZ7 120 aa12.19□□□□□ -0.46
BRAT1-206ENST00000493232 CFAP126Q5VTH2 177 aa12.19□□□□□ -0.46
BRAT1-206ENST00000493232 CDKN2A-AS1Q9UH64 79 aa12.19□□□□□ -0.46
BRAT1-206ENST00000493232 DENND4AQ7Z401 1863 aa12.19□□□□□ -0.46
BRAT1-206ENST00000493232 BPY2O14599 106 aa12.19□□□□□ -0.46
BRAT1-206ENST00000493232 ZNF295-AS1Q8N0V1 137 aa12.19□□□□□ -0.46
BRAT1-206ENST00000493232 MBD6Q96DN6 1003 aa12.19□□□□□ -0.46
BRAT1-206ENST00000493232 PSMG3-AS1Q96PY0 264 aa12.19□□□□□ -0.46
BRAT1-206ENST00000493232 IGLV4-3A0A075B6K6 122 aa12.19□□□□□ -0.46
BRAT1-206ENST00000493232 TRBV6-8A0A0A6YYG3 113 aa12.18□□□□□ -0.46
BRAT1-206ENST00000493232 CRIP3Q6Q6R5 217 aa12.18□□□□□ -0.46
BRAT1-206ENST00000493232 GDF5OSQ5U4N7 250 aa12.18□□□□□ -0.46
BRAT1-206ENST00000493232 SS18L2Q9UHA2 77 aa12.18□□□□□ -0.46
BRAT1-206ENST00000493232 ZNF22P17026 224 aaPredicted RBP12.18□□□□□ -0.46
BRAT1-206ENST00000493232 TMEM223A0PJW6 202 aa12.17□□□□□ -0.46
BRAT1-206ENST00000493232 TCL1BO95988 128 aa12.17□□□□□ -0.46
BRAT1-206ENST00000493232 SPG11Q96JI7 2443 aa12.17□□□□□ -0.46
BRAT1-206ENST00000493232 M0QY20 66 aa12.17□□□□□ -0.46
BRAT1-206ENST00000493232 ZNF843Q8N446 348 aa12.17□□□□□ -0.46
BRAT1-206ENST00000493232 OBSL1O75147 1896 aa12.17□□□□□ -0.46
BRAT1-206ENST00000493232 FAM19A1Q7Z5A9 133 aa12.16□□□□□ -0.46
BRAT1-206ENST00000493232 FAM110AQ9BQ89 295 aa12.16□□□□□ -0.46
BRAT1-206ENST00000493232 NDUFC2O95298 119 aa12.16□□□□□ -0.46
BRAT1-206ENST00000493232 SEC61GP60059 68 aa12.16□□□□□ -0.46
BRAT1-206ENST00000493232 SPANXB1Q9NS25 103 aaPredicted RBP12.15□□□□□ -0.46
BRAT1-206ENST00000493232 TRAV10A0A0B4J240 114 aa12.15□□□□□ -0.46
BRAT1-206ENST00000493232 J3KT08 172 aa12.15□□□□□ -0.46
BRAT1-206ENST00000493232 CUL9Q8IWT3 2517 aa12.15□□□□□ -0.46
BRAT1-206ENST00000493232 FREM1Q5H8C1 2179 aa12.14□□□□□ -0.47
BRAT1-206ENST00000493232 A0A087WZ39 114 aa12.14□□□□□ -0.47
BRAT1-206ENST00000493232 PRB2P02812 416 aaPredicted RBP12.14□□□□□ -0.47
BRAT1-206ENST00000493232 TNRC6BQ9UPQ9 1833 aaKnown RBP12.14□□□□□ -0.47
BRAT1-206ENST00000493232 ZNF702PQ9H963 129 aa12.14□□□□□ -0.47
BRAT1-206ENST00000493232 Q8N6K4 173 aa12.13□□□□□ -0.47
BRAT1-206ENST00000493232 LINC00482Q8N8I6 264 aa12.13□□□□□ -0.47
BRAT1-206ENST00000493232 PYGO1Q9Y3Y4 419 aa12.13□□□□□ -0.47
BRAT1-206ENST00000493232 TRBV6-5A0A0K0K1A5 114 aa12.13□□□□□ -0.47
BRAT1-206ENST00000493232 LINC00308Q8TCZ7 52 aa12.13□□□□□ -0.47
BRAT1-206ENST00000493232 UPK3BQ9BT76 320 aa12.13□□□□□ -0.47
BRAT1-206ENST00000493232 G3V4G9 280 aa12.13□□□□□ -0.47
BRAT1-206ENST00000493232 SYCNQ0VAF6 134 aa12.13□□□□□ -0.47
BRAT1-206ENST00000493232 PTH2Q96A98 100 aa12.13□□□□□ -0.47
BRAT1-206ENST00000493232 U3KQK5 164 aa12.13□□□□□ -0.47
BRAT1-206ENST00000493232 IGKV4-1P06312 121 aa12.12□□□□□ -0.47
BRAT1-206ENST00000493232 LY6G6DO95868 133 aa12.11□□□□□ -0.47
BRAT1-206ENST00000493232 ATP5EP2Q5VTU8 51 aa12.11□□□□□ -0.47
BRAT1-206ENST00000493232 TRBV27A0A0K0K1C4 114 aa12.11□□□□□ -0.47
BRAT1-206ENST00000493232 RNASE8Q8TDE3 154 aaKnown RBP12.11□□□□□ -0.47
BRAT1-206ENST00000493232 CRIP1P50238 77 aa12.11□□□□□ -0.47
BRAT1-206ENST00000493232 OTOGLQ3ZCN5 2332 aa12.1□□□□□ -0.47
BRAT1-206ENST00000493232 C10orf99Q6UWK7 81 aa12.1□□□□□ -0.47
BRAT1-206ENST00000493232 RNF185Q96GF1 192 aa12.1□□□□□ -0.47
BRAT1-206ENST00000493232 LINC01006Q8NI28 216 aa12.09□□□□□ -0.47
BRAT1-206ENST00000493232 CSPG4Q6UVK1 2322 aa12.09□□□□□ -0.47
BRAT1-206ENST00000493232 C7orf33Q8WU49 177 aa12.09□□□□□ -0.47
BRAT1-206ENST00000493232 ZNF106Q9H2Y7 1883 aaKnown RBP12.08□□□□□ -0.47
BRAT1-206ENST00000493232 NCOA6Q14686 2063 aaPredicted RBP12.08□□□□□ -0.48
BRAT1-206ENST00000493232 BBC3Q96PG8 261 aaPredicted RBP12.08□□□□□ -0.48
BRAT1-206ENST00000493232 PIEZO1Q92508 2521 aa12.08□□□□□ -0.48
BRAT1-206ENST00000493232 RBX1P62877 108 aa12.07□□□□□ -0.48
BRAT1-206ENST00000493232 FAM19A5Q7Z5A7 132 aaPredicted RBP12.07□□□□□ -0.48
BRAT1-206ENST00000493232 TIMM17BO60830 172 aa12.07□□□□□ -0.48
BRAT1-206ENST00000493232 CD164L2Q6UWJ8 174 aa12.07□□□□□ -0.48
BRAT1-206ENST00000493232 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.07□□□□□ -0.48
BRAT1-206ENST00000493232 XAGE1AQ9HD64 81 aa12.06□□□□□ -0.48
BRAT1-206ENST00000493232 TRAV23DV6A0A075B6W5 121 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms