RNA–Protein interactions for RNA: ENST00000493212.1

PHTF1-212, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 956 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-212ENST00000493212 SMIM12Q96EX1 92 aa13.16□□□□□ -0.3
PHTF1-212ENST00000493212 XKRY2A2RUG3 117 aa13.15□□□□□ -0.3
PHTF1-212ENST00000493212 F2Z2F3 143 aa13.15□□□□□ -0.3
PHTF1-212ENST00000493212 RNF185Q96GF1 192 aa13.15□□□□□ -0.3
PHTF1-212ENST00000493212 NIT2Q9NQR4 276 aa13.15□□□□□ -0.3
PHTF1-212ENST00000493212 TRBV20OR9-2A0A075B6H5 130 aa13.14□□□□□ -0.31
PHTF1-212ENST00000493212 IGHV3-64A0A075B6Q5 118 aa13.14□□□□□ -0.31
PHTF1-212ENST00000493212 RAB19A4D1S5 217 aa13.14□□□□□ -0.31
PHTF1-212ENST00000493212 SPACA4Q8TDM5 124 aa13.14□□□□□ -0.31
PHTF1-212ENST00000493212 BIN3Q9NQY0 253 aa13.14□□□□□ -0.31
PHTF1-212ENST00000493212 A0A087WYN8 130 aa13.13□□□□□ -0.31
PHTF1-212ENST00000493212 IFNA1P01562 189 aa13.13□□□□□ -0.31
PHTF1-212ENST00000493212 LYZL1Q6UWQ5 148 aa13.13□□□□□ -0.31
PHTF1-212ENST00000493212 ALKAL2Q6UX46 152 aa13.13□□□□□ -0.31
PHTF1-212ENST00000493212 DPH3P1Q9H4G8 78 aa13.13□□□□□ -0.31
PHTF1-212ENST00000493212 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.12□□□□□ -0.31
PHTF1-212ENST00000493212 PDE6DO43924 150 aa13.12□□□□□ -0.31
PHTF1-212ENST00000493212 TRGC1P0CF51 173 aa13.12□□□□□ -0.31
PHTF1-212ENST00000493212 CHTF8P0CG12 524 aa13.12□□□□□ -0.31
PHTF1-212ENST00000493212 NTF3P20783 257 aa13.12□□□□□ -0.31
PHTF1-212ENST00000493212 GNG4P50150 75 aa13.12□□□□□ -0.31
PHTF1-212ENST00000493212 AP5S1Q9NUS5 200 aa13.12□□□□□ -0.31
PHTF1-212ENST00000493212 WDR73Q6P4I2 378 aa13.11□□□□□ -0.31
PHTF1-212ENST00000493212 C15orf56Q8N910 161 aa13.11□□□□□ -0.31
PHTF1-212ENST00000493212 CTRLP40313 264 aa13.1□□□□□ -0.31
PHTF1-212ENST00000493212 MEF2BQ02080 365 aaPredicted RBP13.1□□□□□ -0.31
PHTF1-212ENST00000493212 CNFNQ9BYD5 112 aa13.1□□□□□ -0.31
PHTF1-212ENST00000493212 PLAC8Q9NZF1 115 aa13.1□□□□□ -0.31
PHTF1-212ENST00000493212 AMTP48728 403 aa13.09□□□□□ -0.31
PHTF1-212ENST00000493212 BLOC1S1P78537 153 aa13.09□□□□□ -0.31
PHTF1-212ENST00000493212 COTL1Q14019 142 aa13.09□□□□□ -0.31
PHTF1-212ENST00000493212 UBE2L6O14933 153 aa13.07□□□□□ -0.32
PHTF1-212ENST00000493212 TAGLN2P37802 199 aaKnown RBP13.07□□□□□ -0.32
PHTF1-212ENST00000493212 GATD1Q8NB37 220 aa13.07□□□□□ -0.32
PHTF1-212ENST00000493212 NUDT10Q8NFP7 164 aa13.07□□□□□ -0.32
PHTF1-212ENST00000493212 NUDT11Q96G61 164 aa13.07□□□□□ -0.32
PHTF1-212ENST00000493212 MED9Q9NWA0 146 aa13.07□□□□□ -0.32
PHTF1-212ENST00000493212 TNXBP22105 4242 aa13.06□□□□□ -0.32
PHTF1-212ENST00000493212 GAGE12HA6NDE8 117 aa13.06□□□□□ -0.32
PHTF1-212ENST00000493212 DPH3Q96FX2 82 aa13.05□□□□□ -0.32
PHTF1-212ENST00000493212 PHOX2AO14813 284 aa13.04□□□□□ -0.32
PHTF1-212ENST00000493212 BCL2P10415 239 aa13.04□□□□□ -0.32
PHTF1-212ENST00000493212 COX6A2Q02221 97 aa13.04□□□□□ -0.32
PHTF1-212ENST00000493212 CFAP161Q6P656 301 aa13.04□□□□□ -0.32
PHTF1-212ENST00000493212 TRAV26-2A0A0B4J265 109 aa13.03□□□□□ -0.32
PHTF1-212ENST00000493212 RPS10P46783 165 aaKnown RBP13.03□□□□□ -0.32
PHTF1-212ENST00000493212 TWIST1Q15672 202 aa13.03□□□□□ -0.32
PHTF1-212ENST00000493212 LYPD6BQ8NI32 183 aa13.03□□□□□ -0.32
PHTF1-212ENST00000493212 PRSS3P2Q8NHM4 247 aa13.02□□□□□ -0.33
PHTF1-212ENST00000493212 GVQW2A0A096LPI5 108 aaPredicted RBP13.01□□□□□ -0.33
PHTF1-212ENST00000493212 K7EN84 100 aa13.01□□□□□ -0.33
PHTF1-212ENST00000493212 NDUFS6O75380 124 aaKnown RBP13.01□□□□□ -0.33
PHTF1-212ENST00000493212 NCR2O95944 276 aa13.01□□□□□ -0.33
PHTF1-212ENST00000493212 HIGD2BQ4VC39 106 aa13.01□□□□□ -0.33
PHTF1-212ENST00000493212 TEX261Q6UWH6 196 aa13.01□□□□□ -0.33
PHTF1-212ENST00000493212 CHCHD10Q8WYQ3 142 aaPredicted RBP13.01□□□□□ -0.33
PHTF1-212ENST00000493212 RPL39LQ96EH5 51 aaKnown RBP13.01□□□□□ -0.33
PHTF1-212ENST00000493212 RPP21Q9H633 154 aaKnown RBP13.01□□□□□ -0.33
PHTF1-212ENST00000493212 LRP2P98164 4655 aa13.01□□□□□ -0.33
PHTF1-212ENST00000493212 IGKV3OR2-268A0A0C4DH90 116 aa13□□□□□ -0.33
PHTF1-212ENST00000493212 H7C423 109 aa13□□□□□ -0.33
PHTF1-212ENST00000493212 C7orf33Q8WU49 177 aa13□□□□□ -0.33
PHTF1-212ENST00000493212 RNASE7Q9H1E1 156 aaKnown RBP13□□□□□ -0.33
PHTF1-212ENST00000493212 GTSF1Q8WW33 167 aa12.99□□□□□ -0.33
PHTF1-212ENST00000493212 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.98□□□□□ -0.33
PHTF1-212ENST00000493212 IGKV2-29A2NJV5 120 aaPredicted RBP12.98□□□□□ -0.33
PHTF1-212ENST00000493212 FOXA3P55318 350 aaPredicted RBP12.98□□□□□ -0.33
PHTF1-212ENST00000493212 FOXI1Q12951 378 aa12.98□□□□□ -0.33
PHTF1-212ENST00000493212 MAJINQ3KP22 176 aa12.98□□□□□ -0.33
PHTF1-212ENST00000493212 AMMECR1LQ6DCA0 310 aa12.98□□□□□ -0.33
PHTF1-212ENST00000493212 SMIM15Q7Z3B0 74 aa12.98□□□□□ -0.33
PHTF1-212ENST00000493212 OCC1Q8TAD7 63 aa12.98□□□□□ -0.33
PHTF1-212ENST00000493212 FGF6P10767 208 aa12.97□□□□□ -0.33
PHTF1-212ENST00000493212 PRR3P79522 188 aaKnown RBP12.97□□□□□ -0.33
PHTF1-212ENST00000493212 IGKV2-24A0A0C4DH68 120 aa12.96□□□□□ -0.33
PHTF1-212ENST00000493212 SDHAF1A6NFY7 115 aa12.96□□□□□ -0.33
PHTF1-212ENST00000493212 APCSP02743 223 aa12.96□□□□□ -0.33
PHTF1-212ENST00000493212 RNASEKQ6P5S7 137 aaKnown RBP12.96□□□□□ -0.33
PHTF1-212ENST00000493212 LINC01600Q96MT4 127 aa12.96□□□□□ -0.33
PHTF1-212ENST00000493212 A0A096LNI7 61 aa12.95□□□□□ -0.34
PHTF1-212ENST00000493212 FAM231BA6NCW3 169 aa12.95□□□□□ -0.34
PHTF1-212ENST00000493212 STPG4Q8N801 248 aa12.95□□□□□ -0.34
PHTF1-212ENST00000493212 OR5A1Q8NGJ0 315 aa12.95□□□□□ -0.34
PHTF1-212ENST00000493212 TRBV6-5A0A0K0K1A5 114 aa12.94□□□□□ -0.34
PHTF1-212ENST00000493212 ZNF25P17030 456 aaPredicted RBP12.94□□□□□ -0.34
PHTF1-212ENST00000493212 ESDP10768 282 aa12.92□□□□□ -0.34
PHTF1-212ENST00000493212 FAM210AQ96ND0 272 aa12.92□□□□□ -0.34
PHTF1-212ENST00000493212 LINC00959A0A1B0GUT2 108 aa12.91□□□□□ -0.34
PHTF1-212ENST00000493212 TMEM250H0YL14 139 aa12.91□□□□□ -0.34
PHTF1-212ENST00000493212 I3L3M4 83 aa12.91□□□□□ -0.34
PHTF1-212ENST00000493212 FAM231DQ6ZW35 169 aa12.91□□□□□ -0.34
PHTF1-212ENST00000493212 EIF5A2Q9GZV4 153 aaKnown RBP12.91□□□□□ -0.34
PHTF1-212ENST00000493212 GAS8-AS1O95177 125 aa12.9□□□□□ -0.34
PHTF1-212ENST00000493212 TSHBP01222 138 aa12.9□□□□□ -0.34
PHTF1-212ENST00000493212 XCL1P47992 114 aa12.9□□□□□ -0.34
PHTF1-212ENST00000493212 LINC00474Q9P2X8 69 aa12.9□□□□□ -0.34
PHTF1-212ENST00000493212 RNF213Q63HN8 5207 aa12.9□□□□□ -0.34
PHTF1-212ENST00000493212 IGHV1-58A0A0C4DH39 117 aa12.89□□□□□ -0.35
PHTF1-212ENST00000493212 CCL25O15444 150 aa12.89□□□□□ -0.35
PHTF1-212ENST00000493212 PMCHP20382 165 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms