RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 NKX2-5P52952 324 aaPredicted RBP7.52□□□□□ -1.21
LRTM1-202ENST00000493075 HAMPP81172 84 aa7.52□□□□□ -1.21
LRTM1-202ENST00000493075 GAGE6Q13070 117 aa7.52□□□□□ -1.21
LRTM1-202ENST00000493075 TWIST1Q15672 202 aa7.52□□□□□ -1.21
LRTM1-202ENST00000493075 ALKAL2Q6UX46 152 aa7.52□□□□□ -1.21
LRTM1-202ENST00000493075 RNASE7Q9H1E1 156 aaKnown RBP7.52□□□□□ -1.21
LRTM1-202ENST00000493075 FAM231DQ6ZW35 169 aa7.51□□□□□ -1.21
LRTM1-202ENST00000493075 LINC00269Q8N2A0 174 aa7.51□□□□□ -1.21
LRTM1-202ENST00000493075 VPS13BQ7Z7G8 4022 aa7.5□□□□□ -1.21
LRTM1-202ENST00000493075 FOXA3P55318 350 aaPredicted RBP7.5□□□□□ -1.21
LRTM1-202ENST00000493075 KRTAP26-1Q6PEX3 210 aa7.5□□□□□ -1.21
LRTM1-202ENST00000493075 GTSF1Q8WW33 167 aa7.5□□□□□ -1.21
LRTM1-202ENST00000493075 TMEM243Q9BU79 118 aa7.5□□□□□ -1.21
LRTM1-202ENST00000493075 TRAV8-4A0A0B4J246 113 aa7.49□□□□□ -1.21
LRTM1-202ENST00000493075 A8MWL6 223 aa7.49□□□□□ -1.21
LRTM1-202ENST00000493075 GATCO43716 136 aaKnown RBP7.49□□□□□ -1.21
LRTM1-202ENST00000493075 CT83Q5H943 113 aa7.49□□□□□ -1.21
LRTM1-202ENST00000493075 DGAT2L7PQ6IED9 249 aa7.49□□□□□ -1.21
LRTM1-202ENST00000493075 TEX261Q6UWH6 196 aa7.49□□□□□ -1.21
LRTM1-202ENST00000493075 SMIM15Q7Z3B0 74 aa7.49□□□□□ -1.21
LRTM1-202ENST00000493075 USP17L23D6RBM5 183 aa7.48□□□□□ -1.21
LRTM1-202ENST00000493075 PLA2G1BP04054 148 aaKnown RBP7.48□□□□□ -1.21
LRTM1-202ENST00000493075 REG3AQ06141 175 aa7.48□□□□□ -1.21
LRTM1-202ENST00000493075 COTL1Q14019 142 aa7.48□□□□□ -1.21
LRTM1-202ENST00000493075 LINC01620Q4KN68 170 aa7.48□□□□□ -1.21
LRTM1-202ENST00000493075 GATD1Q8NB37 220 aa7.48□□□□□ -1.21
LRTM1-202ENST00000493075 C20orf203Q8NBC4 194 aa7.48□□□□□ -1.21
LRTM1-202ENST00000493075 CHAC1Q9BUX1 264 aa7.48□□□□□ -1.21
LRTM1-202ENST00000493075 SCXQ7RTU7 201 aa7.47□□□□□ -1.21
LRTM1-202ENST00000493075 FAM210AQ96ND0 272 aa7.47□□□□□ -1.21
LRTM1-202ENST00000493075 EIF5A2Q9GZV4 153 aaKnown RBP7.47□□□□□ -1.21
LRTM1-202ENST00000493075 IGLV4-60A0A075B6I1 120 aa7.46□□□□□ -1.22
LRTM1-202ENST00000493075 FAM231BA6NCW3 169 aa7.46□□□□□ -1.22
LRTM1-202ENST00000493075 UBE2L6O14933 153 aa7.46□□□□□ -1.22
LRTM1-202ENST00000493075 NCR2O95944 276 aa7.46□□□□□ -1.22
LRTM1-202ENST00000493075 HLA-DQA1P01909 254 aa7.46□□□□□ -1.22
LRTM1-202ENST00000493075 PRSS1P07477 247 aa7.46□□□□□ -1.22
LRTM1-202ENST00000493075 AMTP48728 403 aa7.46□□□□□ -1.22
LRTM1-202ENST00000493075 CLPSL2Q6UWE3 100 aa7.46□□□□□ -1.22
LRTM1-202ENST00000493075 GFRA4Q9GZZ7 299 aa7.46□□□□□ -1.22
LRTM1-202ENST00000493075 TRAV26-2A0A0B4J265 109 aa7.45□□□□□ -1.22
LRTM1-202ENST00000493075 H7C423 109 aa7.45□□□□□ -1.22
LRTM1-202ENST00000493075 CEBPGP53567 150 aa7.45□□□□□ -1.22
LRTM1-202ENST00000493075 LINC01551Q86U37 167 aa7.45□□□□□ -1.22
LRTM1-202ENST00000493075 C9orf163Q8N9P6 203 aa7.45□□□□□ -1.22
LRTM1-202ENST00000493075 CIRBP-AS1Q8TBR5 109 aa7.45□□□□□ -1.22
LRTM1-202ENST00000493075 SMIM7Q9BQ49 75 aa7.45□□□□□ -1.22
LRTM1-202ENST00000493075 OSTCQ9NRP0 149 aa7.45□□□□□ -1.22
LRTM1-202ENST00000493075 SRRM2Q9UQ35 2752 aaKnown RBP7.44□□□□□ -1.22
LRTM1-202ENST00000493075 TRBV6-5A0A0K0K1A5 114 aa7.44□□□□□ -1.22
LRTM1-202ENST00000493075 ZNF727A8MUV8 499 aa7.44□□□□□ -1.22
LRTM1-202ENST00000493075 SRP19P09132 144 aaKnown RBP7.44□□□□□ -1.22
LRTM1-202ENST00000493075 TSKUQ8WUA8 353 aa7.44□□□□□ -1.22
LRTM1-202ENST00000493075 BORCS7Q96B45 105 aa7.44□□□□□ -1.22
LRTM1-202ENST00000493075 IGLV10-54A0A075B6I4 117 aa7.43□□□□□ -1.22
LRTM1-202ENST00000493075 A0A1B0GUT8 65 aa7.43□□□□□ -1.22
LRTM1-202ENST00000493075 SDHAF1A6NFY7 115 aa7.43□□□□□ -1.22
LRTM1-202ENST00000493075 DEFB104AQ8WTQ1 72 aa7.43□□□□□ -1.22
LRTM1-202ENST00000493075 RPL39LQ96EH5 51 aaKnown RBP7.43□□□□□ -1.22
LRTM1-202ENST00000493075 TMEM191AQ9H0A3 160 aa7.43□□□□□ -1.22
LRTM1-202ENST00000493075 HIGD1CA8MV81 97 aa7.42□□□□□ -1.22
LRTM1-202ENST00000493075 I3L3M4 83 aa7.42□□□□□ -1.22
LRTM1-202ENST00000493075 CNBPP62633 177 aaKnown RBP7.42□□□□□ -1.22
LRTM1-202ENST00000493075 FAM74A3Q4VXF1 159 aa7.42□□□□□ -1.22
LRTM1-202ENST00000493075 A0A1B0GVG6 124 aa7.41□□□□□ -1.22
LRTM1-202ENST00000493075 APCSP02743 223 aa7.41□□□□□ -1.22
LRTM1-202ENST00000493075 PMCHP20382 165 aa7.41□□□□□ -1.22
LRTM1-202ENST00000493075 TMEM241Q24JQ0 296 aa7.41□□□□□ -1.22
LRTM1-202ENST00000493075 SDIM1Q6ZPB5 146 aa7.41□□□□□ -1.22
LRTM1-202ENST00000493075 ZNF25P17030 456 aaPredicted RBP7.4□□□□□ -1.22
LRTM1-202ENST00000493075 RAB4AP20338 218 aa7.4□□□□□ -1.22
LRTM1-202ENST00000493075 AMMECR1LQ6DCA0 310 aa7.4□□□□□ -1.22
LRTM1-202ENST00000493075 MRAP2Q96G30 205 aa7.4□□□□□ -1.22
LRTM1-202ENST00000493075 ST20Q9HBF5 79 aa7.4□□□□□ -1.22
LRTM1-202ENST00000493075 AP5S1Q9NUS5 200 aa7.4□□□□□ -1.22
LRTM1-202ENST00000493075 V9GYV3 84 aa7.4□□□□□ -1.22
LRTM1-202ENST00000493075 HERC1Q15751 4861 aa7.4□□□□□ -1.22
LRTM1-202ENST00000493075 MYCBP2O75592 4640 aa7.4□□□□□ -1.23
LRTM1-202ENST00000493075 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.39□□□□□ -1.23
LRTM1-202ENST00000493075 hDV102S1A0JD36 115 aa7.39□□□□□ -1.23
LRTM1-202ENST00000493075 ZNF561-AS1K7EIQ3 104 aa7.39□□□□□ -1.23
LRTM1-202ENST00000493075 FGF6P10767 208 aa7.39□□□□□ -1.23
LRTM1-202ENST00000493075 ESDP10768 282 aa7.39□□□□□ -1.23
LRTM1-202ENST00000493075 POLR2KP53803 58 aaKnown RBP7.39□□□□□ -1.23
LRTM1-202ENST00000493075 KRTAP10-4P60372 401 aaPredicted RBP7.39□□□□□ -1.23
LRTM1-202ENST00000493075 RIGQ13278 110 aa7.39□□□□□ -1.23
LRTM1-202ENST00000493075 ISOC2Q96AB3 205 aa7.39□□□□□ -1.23
LRTM1-202ENST00000493075 RNF185Q96GF1 192 aa7.39□□□□□ -1.23
LRTM1-202ENST00000493075 SMDT1Q9H4I9 107 aa7.39□□□□□ -1.23
LRTM1-202ENST00000493075 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.38□□□□□ -1.23
LRTM1-202ENST00000493075 TRBV27A0A0K0K1C4 114 aa7.38□□□□□ -1.23
LRTM1-202ENST00000493075 IGKV2-29A2NJV5 120 aaPredicted RBP7.38□□□□□ -1.23
LRTM1-202ENST00000493075 GAGE12HA6NDE8 117 aa7.38□□□□□ -1.23
LRTM1-202ENST00000493075 KRTAP29-1A8MX34 341 aaPredicted RBP7.38□□□□□ -1.23
LRTM1-202ENST00000493075 SLPIP03973 132 aa7.38□□□□□ -1.23
LRTM1-202ENST00000493075 RPL23P62829 140 aaKnown RBP7.38□□□□□ -1.23
LRTM1-202ENST00000493075 RNASEKQ6P5S7 137 aaKnown RBP7.38□□□□□ -1.23
LRTM1-202ENST00000493075 NUP35Q8NFH5 326 aa7.38□□□□□ -1.23
LRTM1-202ENST00000493075 GAS8-AS1O95177 125 aa7.37□□□□□ -1.23
LRTM1-202ENST00000493075 PPP1R17O96001 155 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms