RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 Q8NAQ8 132 aa6.73□□□□□ -1.33
CSTF1-206ENST00000493039 C11orf72Q8NBR9 251 aa6.73□□□□□ -1.33
CSTF1-206ENST00000493039 OR10AG1Q8NH19 301 aa6.73□□□□□ -1.33
CSTF1-206ENST00000493039 SPCS1Q9Y6A9 102 aa6.73□□□□□ -1.33
CSTF1-206ENST00000493039 TMSB15BA0A087X1C1 80 aa6.72□□□□□ -1.33
CSTF1-206ENST00000493039 V9GYV3 84 aa6.72□□□□□ -1.33
CSTF1-206ENST00000493039 IGHV3-16A0A0C4DH30 117 aa6.72□□□□□ -1.33
CSTF1-206ENST00000493039 GRIFINA4D1Z8 144 aa6.72□□□□□ -1.33
CSTF1-206ENST00000493039 USP17L23D6RBM5 183 aa6.72□□□□□ -1.33
CSTF1-206ENST00000493039 DEFB4AO15263 64 aa6.72□□□□□ -1.33
CSTF1-206ENST00000493039 FOXI1Q12951 378 aa6.72□□□□□ -1.33
CSTF1-206ENST00000493039 IBA57Q5T440 356 aaKnown RBP6.72□□□□□ -1.33
CSTF1-206ENST00000493039 C20orf78Q9BR46 151 aa6.72□□□□□ -1.33
CSTF1-206ENST00000493039 OSTCQ9NRP0 149 aa6.72□□□□□ -1.33
CSTF1-206ENST00000493039 TRBV20-1A0A075B6N2 111 aa6.71□□□□□ -1.34
CSTF1-206ENST00000493039 IGHV4-28A0A0C4DH34 117 aa6.71□□□□□ -1.34
CSTF1-206ENST00000493039 P01737 135 aa6.71□□□□□ -1.34
CSTF1-206ENST00000493039 RNASE3P12724 160 aaKnown RBP6.71□□□□□ -1.34
CSTF1-206ENST00000493039 PNRC1Q12796 327 aaPredicted RBP6.71□□□□□ -1.34
CSTF1-206ENST00000493039 A0A1W2PPM0 123 aa6.7□□□□□ -1.34
CSTF1-206ENST00000493039 RRN3P1Q2M238 152 aa6.7□□□□□ -1.34
CSTF1-206ENST00000493039 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
CSTF1-206ENST00000493039 GTSF1Q8WW33 167 aa6.7□□□□□ -1.34
CSTF1-206ENST00000493039 C9orf85Q96MD7 179 aa6.7□□□□□ -1.34
CSTF1-206ENST00000493039 KIR2DL4Q99706 377 aa6.7□□□□□ -1.34
CSTF1-206ENST00000493039 RPL13AP40429 203 aaKnown RBP6.7□□□□□ -1.34
CSTF1-206ENST00000493039 GAGE2BQ13066 116 aa6.7□□□□□ -1.34
CSTF1-206ENST00000493039 PMCHL1Q16048 86 aa6.7□□□□□ -1.34
CSTF1-206ENST00000493039 GAGE2EQ4V326 116 aa6.7□□□□□ -1.34
CSTF1-206ENST00000493039 TMEM263Q8WUH6 116 aaKnown RBP6.7□□□□□ -1.34
CSTF1-206ENST00000493039 KCNS1Q96KK3 526 aa6.7□□□□□ -1.34
CSTF1-206ENST00000493039 RPP21Q9H633 154 aaKnown RBP6.7□□□□□ -1.34
CSTF1-206ENST00000493039 GAGE2DQ9UEU5 116 aa6.7□□□□□ -1.34
CSTF1-206ENST00000493039 NUPR1O60356 82 aa6.69□□□□□ -1.34
CSTF1-206ENST00000493039 MIFP14174 115 aa6.69□□□□□ -1.34
CSTF1-206ENST00000493039 HERVK_113P63121 156 aa6.69□□□□□ -1.34
CSTF1-206ENST00000493039 OR10G8Q8NGN5 311 aa6.69□□□□□ -1.34
CSTF1-206ENST00000493039 PLEKHB2Q96CS7 222 aa6.69□□□□□ -1.34
CSTF1-206ENST00000493039 SCRT2Q9NQ03 307 aa6.69□□□□□ -1.34
CSTF1-206ENST00000493039 MUC4Q99102 2169 aa6.69□□□□□ -1.34
CSTF1-206ENST00000493039 ZNF493Q6ZR52 646 aa6.69□□□□□ -1.34
CSTF1-206ENST00000493039 ATOH7Q8N100 152 aa6.69□□□□□ -1.34
CSTF1-206ENST00000493039 ATP6V0E2Q8NHE4 81 aa6.69□□□□□ -1.34
CSTF1-206ENST00000493039 C2orf48Q96LS8 159 aa6.69□□□□□ -1.34
CSTF1-206ENST00000493039 DNAH7Q8WXX0 4024 aa6.69□□□□□ -1.34
CSTF1-206ENST00000493039 H3BUT2 72 aa6.68□□□□□ -1.34
CSTF1-206ENST00000493039 ARMS2P0C7Q2 107 aa6.68□□□□□ -1.34
CSTF1-206ENST00000493039 IL36BQ9NZH7 164 aa6.68□□□□□ -1.34
CSTF1-206ENST00000493039 TRGV11A0A075B6L2 103 aa6.68□□□□□ -1.34
CSTF1-206ENST00000493039 TRAV9-2A0A087WT02 112 aa6.68□□□□□ -1.34
CSTF1-206ENST00000493039 H3BVH4 76 aa6.68□□□□□ -1.34
CSTF1-206ENST00000493039 FABP2P12104 132 aa6.68□□□□□ -1.34
CSTF1-206ENST00000493039 NMUP48645 174 aa6.68□□□□□ -1.34
CSTF1-206ENST00000493039 FOXA3P55318 350 aaPredicted RBP6.68□□□□□ -1.34
CSTF1-206ENST00000493039 DAZ2Q13117 558 aaKnown RBP6.68□□□□□ -1.34
CSTF1-206ENST00000493039 TSKUQ8WUA8 353 aa6.68□□□□□ -1.34
CSTF1-206ENST00000493039 C16orf74Q96GX8 76 aa6.68□□□□□ -1.34
CSTF1-206ENST00000493039 NOP10Q9NPE3 64 aaKnown RBP6.68□□□□□ -1.34
CSTF1-206ENST00000493039 CELA1Q9UNI1 258 aa6.68□□□□□ -1.34
CSTF1-206ENST00000493039 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
CSTF1-206ENST00000493039 A0A0J9YWU9 116 aa6.67□□□□□ -1.34
CSTF1-206ENST00000493039 FAM236AA0A1B0GUQ0 79 aa6.67□□□□□ -1.34
CSTF1-206ENST00000493039 FAM236BA0A1B0GV22 79 aa6.67□□□□□ -1.34
CSTF1-206ENST00000493039 ASIPP42127 132 aa6.67□□□□□ -1.34
CSTF1-206ENST00000493039 BORCS7Q96B45 105 aa6.67□□□□□ -1.34
CSTF1-206ENST00000493039 SMIM27A0A1W2PRY6 76 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 A8MWL6 223 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 OR5AL1P0C617 328 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 Q6ZTI0 123 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 DKK2Q9UBU2 259 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 Q9UF83 564 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 TIMM8BQ9Y5J9 83 aaPredicted RBP6.66□□□□□ -1.34
CSTF1-206ENST00000493039 HIGD1CA8MV81 97 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 SPINK4O60575 86 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 GATA1P15976 413 aaPredicted RBP6.66□□□□□ -1.34
CSTF1-206ENST00000493039 S100A4P26447 101 aaKnown RBP6.66□□□□□ -1.34
CSTF1-206ENST00000493039 FAM222AQ5U5X8 452 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 LYZL1Q6UWQ5 148 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 LINC00612Q8N6U2 182 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 C18orf32Q8TCD1 76 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 C11orf68Q9H3H3 251 aaKnown RBP6.66□□□□□ -1.34
CSTF1-206ENST00000493039 MSRB1Q9NZV6 116 aa6.66□□□□□ -1.34
CSTF1-206ENST00000493039 TMEM262E9PQX1 116 aa6.65□□□□□ -1.34
CSTF1-206ENST00000493039 J3QQQ9 107 aa6.65□□□□□ -1.34
CSTF1-206ENST00000493039 PMAIP1Q13794 54 aa6.65□□□□□ -1.34
CSTF1-206ENST00000493039 SPATA12Q7Z6I5 190 aa6.65□□□□□ -1.34
CSTF1-206ENST00000493039 POM121L12Q8N7R1 296 aa6.65□□□□□ -1.34
CSTF1-206ENST00000493039 NUP35Q8NFH5 326 aa6.65□□□□□ -1.34
CSTF1-206ENST00000493039 GFRA4Q9GZZ7 299 aa6.65□□□□□ -1.34
CSTF1-206ENST00000493039 SNURFLB1AK76 121 aa6.65□□□□□ -1.35
CSTF1-206ENST00000493039 NXPH4O95158 308 aa6.65□□□□□ -1.35
CSTF1-206ENST00000493039 MED14OSP0DP75 135 aa6.65□□□□□ -1.35
CSTF1-206ENST00000493039 KRTDAPP60985 99 aa6.65□□□□□ -1.35
CSTF1-206ENST00000493039 WFDC2Q14508 124 aa6.65□□□□□ -1.35
CSTF1-206ENST00000493039 C11orf45Q8TAV5 145 aa6.65□□□□□ -1.35
CSTF1-206ENST00000493039 PGLYRP4Q96LB8 373 aa6.65□□□□□ -1.35
CSTF1-206ENST00000493039 CNFNQ9BYD5 112 aa6.65□□□□□ -1.35
CSTF1-206ENST00000493039 M0R2P5 195 aa6.64□□□□□ -1.35
CSTF1-206ENST00000493039 MT-ND6P03923 174 aa6.64□□□□□ -1.35
CSTF1-206ENST00000493039 ETDBQ3ZM63 59 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms