RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 TRGV1A0A0A0MS02 117 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 TRAV8-6A0A0B4J262 113 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 A0A1B0GV50 99 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 FAM24AA6NFZ4 105 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 C9JQL5 133 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 PAX4O43316 350 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 IFITM1P13164 125 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 LINC00315P59091 139 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 KRTAP10-2P60368 255 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 FOXI1Q12951 378 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 BVES-AS1Q5T3Y7 98 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 Q6ZUT4 128 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 GOLT1AQ6ZVE7 132 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 VGLL1Q99990 258 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 TP53TG3Q9ULZ0 132 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 KLF12Q9Y4X4 402 aa6.26□□□□□ -1.41
HDAC3-212ENST00000492407 IGHV1OR15-1A0A075B7D0 117 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 RBAKDNA6NC62 111 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 M0R3E3 92 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 ATP5LO75964 103 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 LINC00694P0DN24 101 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 RNASE4P34096 147 aaKnown RBP6.25□□□□□ -1.41
HDAC3-212ENST00000492407 ERCC8Q13216 396 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 LYPD1Q8N2G4 141 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 ZFAND2AQ8N6M9 145 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 ATP5SQ99766 215 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 NPCDR1Q9BY65 106 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 KCNIP2Q9NS61 270 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 ZNF492Q9P255 531 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 HHLA3Q9XRX5 114 aa6.25□□□□□ -1.41
HDAC3-212ENST00000492407 UBE2L5PA0A1B0GUS4 154 aa6.24□□□□□ -1.41
HDAC3-212ENST00000492407 CCDC179H3BU77 68 aa6.24□□□□□ -1.41
HDAC3-212ENST00000492407 NXPH4O95158 308 aa6.24□□□□□ -1.41
HDAC3-212ENST00000492407 NCR2O95944 276 aa6.24□□□□□ -1.41
HDAC3-212ENST00000492407 PRB4P10163 310 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-212ENST00000492407 GATA1P15976 413 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-212ENST00000492407 ZNF138P52744 262 aa6.24□□□□□ -1.41
HDAC3-212ENST00000492407 H2BFSP57053 126 aa6.24□□□□□ -1.41
HDAC3-212ENST00000492407 LYPD5Q6UWN5 251 aa6.24□□□□□ -1.41
HDAC3-212ENST00000492407 FAM231DQ6ZW35 169 aa6.24□□□□□ -1.41
HDAC3-212ENST00000492407 TMEM191AQ9H0A3 160 aa6.24□□□□□ -1.41
HDAC3-212ENST00000492407 LENEPQ9Y5L5 61 aa6.24□□□□□ -1.41
HDAC3-212ENST00000492407 RBFOX3A6NFN3 312 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 EPM2AB3EWF7 344 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 C17orf112F2Z3M2 114 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 PYYP10082 97 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 CSN1S1P47710 185 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 FHL2Q14192 279 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 ICAM4Q14773 271 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 Q6ZVH6 145 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 SH2D6Q7Z4S9 175 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 EXOC3-AS1Q8N2X6 119 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 RASL10AQ92737 203 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 FAM167A-AS1Q96KT0 104 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 KIR2DL4Q99706 377 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 SLC25A2Q9BXI2 301 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 CYTL1Q9NRR1 136 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 LY96Q9Y6Y9 160 aa6.23□□□□□ -1.41
HDAC3-212ENST00000492407 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
HDAC3-212ENST00000492407 GGTLC3B5MD39 225 aa6.22□□□□□ -1.41
HDAC3-212ENST00000492407 DIRC3C9JPN6 131 aa6.22□□□□□ -1.41
HDAC3-212ENST00000492407 CYCSP99999 105 aaKnown RBP6.22□□□□□ -1.41
HDAC3-212ENST00000492407 SERTAD4-AS1Q5TG53 156 aa6.22□□□□□ -1.41
HDAC3-212ENST00000492407 C10orf126Q8N4M7 172 aa6.22□□□□□ -1.41
HDAC3-212ENST00000492407 CMTM2Q8TAZ6 248 aa6.22□□□□□ -1.41
HDAC3-212ENST00000492407 CDIP1Q9H305 208 aa6.22□□□□□ -1.41
HDAC3-212ENST00000492407 TRGV11A0A075B6L2 103 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 A0A087WTM6 91 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 TRGV4A0A0C4DH28 118 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 NDUFC2O95298 119 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 IGLC6P0CF74 106 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 DNAH10OSP0CZ25 163 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 FABP2P12104 132 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 GAGE2EQ4V326 116 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 DPPA3Q6W0C5 159 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 MIR17HGQ75NE6 70 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 OR5C1Q8NGR4 320 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 OR10AG1Q8NH19 301 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 FXYD5Q96DB9 178 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 C8orf49Q96NF6 230 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 TXNDC17Q9BRA2 123 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 PAXXQ9BUH6 204 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 NMES1Q9C002 83 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 MSRB1Q9NZV6 116 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.42
HDAC3-212ENST00000492407 HERC1Q15751 4861 aa6.2□□□□□ -1.42
HDAC3-212ENST00000492407 IGKV2-40A0A087WW87 121 aaPredicted RBP6.2□□□□□ -1.42
HDAC3-212ENST00000492407 K7EQD1 137 aa6.2□□□□□ -1.42
HDAC3-212ENST00000492407 IGKV2D-40P01614 121 aaPredicted RBP6.2□□□□□ -1.42
HDAC3-212ENST00000492407 PRR9Q5T870 116 aa6.2□□□□□ -1.42
HDAC3-212ENST00000492407 Q8N976 141 aa6.2□□□□□ -1.42
HDAC3-212ENST00000492407 C18orf32Q8TCD1 76 aa6.2□□□□□ -1.42
HDAC3-212ENST00000492407 TRAV4A0A0B4J268 109 aa6.19□□□□□ -1.42
HDAC3-212ENST00000492407 A0A1W2PPM0 123 aa6.19□□□□□ -1.42
HDAC3-212ENST00000492407 C9JCJ5 164 aa6.19□□□□□ -1.42
HDAC3-212ENST00000492407 IGHV3-53P01767 116 aa6.19□□□□□ -1.42
HDAC3-212ENST00000492407 INAFM2P0DMQ5 153 aa6.19□□□□□ -1.42
HDAC3-212ENST00000492407 ASIPP42127 132 aa6.19□□□□□ -1.42
HDAC3-212ENST00000492407 TAS2R45P59539 299 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms