RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 LYNX1G3V0Z9 82 aa0.59□□□□□ -2.31
VTA1-204ENST00000491881 JMJD7-PLA2G4BH0Y9G9 81 aa0.59□□□□□ -2.31
VTA1-204ENST00000491881 RER1O15258 196 aa0.59□□□□□ -2.31
VTA1-204ENST00000491881 TRGC2P03986 189 aa0.59□□□□□ -2.31
VTA1-204ENST00000491881 APODP05090 189 aa0.59□□□□□ -2.31
VTA1-204ENST00000491881 VBP1P61758 197 aa0.59□□□□□ -2.31
VTA1-204ENST00000491881 MALSU1Q96EH3 234 aa0.59□□□□□ -2.31
VTA1-204ENST00000491881 SH3BGRL3Q9H299 93 aa0.59□□□□□ -2.31
VTA1-204ENST00000491881 MYH4Q9Y623 1939 aa0.58□□□□□ -2.32
VTA1-204ENST00000491881 TRAV23DV6A0A075B6W5 121 aa0.58□□□□□ -2.32
VTA1-204ENST00000491881 DEFB108AA8MXU0 73 aa0.58□□□□□ -2.32
VTA1-204ENST00000491881 IFNA1P01562 189 aa0.58□□□□□ -2.32
VTA1-204ENST00000491881 PPP1R2P41236 205 aa0.58□□□□□ -2.32
VTA1-204ENST00000491881 BASP1P80723 227 aaKnown RBP0.58□□□□□ -2.32
VTA1-204ENST00000491881 OR10AC1Q8NH08 325 aa0.58□□□□□ -2.32
VTA1-204ENST00000491881 OR13C6PQ8NH95 151 aa0.58□□□□□ -2.32
VTA1-204ENST00000491881 GPX7Q96SL4 187 aaPredicted RBP0.58□□□□□ -2.32
VTA1-204ENST00000491881 PRRT1Q99946 306 aa0.58□□□□□ -2.32
VTA1-204ENST00000491881 HSPB8Q9UJY1 196 aa0.58□□□□□ -2.32
VTA1-204ENST00000491881 A0A096LPI6 279 aa0.57□□□□□ -2.32
VTA1-204ENST00000491881 TRAV5A0A0B4J249 113 aa0.57□□□□□ -2.32
VTA1-204ENST00000491881 hDV103S1A0JD37 113 aa0.57□□□□□ -2.32
VTA1-204ENST00000491881 ODAMA1E959 279 aa0.57□□□□□ -2.32
VTA1-204ENST00000491881 LYRM1O43325 122 aa0.57□□□□□ -2.32
VTA1-204ENST00000491881 HIST1H2BKO60814 126 aa0.57□□□□□ -2.32
VTA1-204ENST00000491881 HIST1H2BJP06899 126 aa0.57□□□□□ -2.32
VTA1-204ENST00000491881 RPL19P84098 196 aaKnown RBP0.57□□□□□ -2.32
VTA1-204ENST00000491881 MSMO1Q15800 293 aa0.57□□□□□ -2.32
VTA1-204ENST00000491881 KRTAP19-2Q3LHN2 52 aa0.57□□□□□ -2.32
VTA1-204ENST00000491881 TMEM14EPQ6UXP3 125 aa0.57□□□□□ -2.32
VTA1-204ENST00000491881 SS18L2Q9UHA2 77 aa0.57□□□□□ -2.32
VTA1-204ENST00000491881 STOML2Q9UJZ1 356 aa0.57□□□□□ -2.32
VTA1-204ENST00000491881 K7ERJ3 54 aa0.56□□□□□ -2.32
VTA1-204ENST00000491881 SPINK9Q5DT21 86 aa0.56□□□□□ -2.32
VTA1-204ENST00000491881 TMED4Q7Z7H5 227 aa0.56□□□□□ -2.32
VTA1-204ENST00000491881 NIT2Q9NQR4 276 aa0.56□□□□□ -2.32
VTA1-204ENST00000491881 TRAV17A0A0B4J275 112 aa0.55□□□□□ -2.32
VTA1-204ENST00000491881 GPR31O00270 319 aa0.55□□□□□ -2.32
VTA1-204ENST00000491881 DEFB133Q30KQ1 61 aa0.55□□□□□ -2.32
VTA1-204ENST00000491881 C1orf140Q5VVS0 124 aa0.55□□□□□ -2.32
VTA1-204ENST00000491881 CROCCP2Q86T23 111 aa0.55□□□□□ -2.32
VTA1-204ENST00000491881 NABP2Q9BQ15 211 aa0.55□□□□□ -2.32
VTA1-204ENST00000491881 GINS3Q9BRX5 216 aa0.55□□□□□ -2.32
VTA1-204ENST00000491881 C10orf95Q9H7T3 257 aa0.55□□□□□ -2.32
VTA1-204ENST00000491881 RNF11Q9Y3C5 154 aa0.55□□□□□ -2.32
VTA1-204ENST00000491881 DOCK11Q5JSL3 2073 aa0.55□□□□□ -2.32
VTA1-204ENST00000491881 MYH1P12882 1939 aa0.54□□□□□ -2.32
VTA1-204ENST00000491881 C9orf170A2RU37 121 aa0.54□□□□□ -2.32
VTA1-204ENST00000491881 IDO1P14902 403 aa0.54□□□□□ -2.32
VTA1-204ENST00000491881 TCTAP57738 103 aa0.54□□□□□ -2.32
VTA1-204ENST00000491881 HBBP68871 147 aa0.54□□□□□ -2.32
VTA1-204ENST00000491881 POU6F1Q14863 301 aa0.54□□□□□ -2.32
VTA1-204ENST00000491881 GLIPR1L1Q6UWM5 242 aa0.54□□□□□ -2.32
VTA1-204ENST00000491881 NUP35Q8NFH5 326 aa0.54□□□□□ -2.32
VTA1-204ENST00000491881 AP3S1Q92572 193 aa0.54□□□□□ -2.32
VTA1-204ENST00000491881 ASB4Q9Y574 426 aa0.54□□□□□ -2.32
VTA1-204ENST00000491881 TRBV30A0A0K0K1B3 111 aa0.53□□□□□ -2.32
VTA1-204ENST00000491881 CST7O76096 145 aa0.53□□□□□ -2.32
VTA1-204ENST00000491881 CRYGSP22914 178 aa0.53□□□□□ -2.32
VTA1-204ENST00000491881 GNG3P63215 75 aa0.53□□□□□ -2.32
VTA1-204ENST00000491881 RTL8BQ17RB0 113 aa0.53□□□□□ -2.32
VTA1-204ENST00000491881 FAM216BQ8N7L0 139 aa0.53□□□□□ -2.32
VTA1-204ENST00000491881 NEK7Q8TDX7 302 aa0.53□□□□□ -2.32
VTA1-204ENST00000491881 RTL8AQ9BWD3 113 aa0.53□□□□□ -2.32
VTA1-204ENST00000491881 MYH9P35579 1960 aaKnown RBP0.52□□□□□ -2.33
VTA1-204ENST00000491881 M0R2T5 61 aa0.52□□□□□ -2.33
VTA1-204ENST00000491881 CD14P08571 375 aa0.52□□□□□ -2.33
VTA1-204ENST00000491881 FXYD4P59646 89 aa0.52□□□□□ -2.33
VTA1-204ENST00000491881 KRTAP20-2Q3LI61 65 aa0.52□□□□□ -2.33
VTA1-204ENST00000491881 VMA21Q3ZAQ7 101 aa0.52□□□□□ -2.33
VTA1-204ENST00000491881 PHF5AQ7RTV0 110 aaKnown RBP0.52□□□□□ -2.33
VTA1-204ENST00000491881 OR2H1Q9GZK4 316 aa0.52□□□□□ -2.33
VTA1-204ENST00000491881 BOKQ9UMX3 212 aaPredicted RBP0.52□□□□□ -2.33
VTA1-204ENST00000491881 CCDC171Q6TFL3 1326 aa0.52□□□□□ -2.33
VTA1-204ENST00000491881 ZNF727A8MUV8 499 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 MFSD11O43934 449 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 MT-ND6P03923 174 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 SPTBP11277 2137 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 RPL35P42766 123 aaKnown RBP0.51□□□□□ -2.33
VTA1-204ENST00000491881 MIR22HGQ0VDD5 57 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 OCIAD2Q56VL3 154 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 FOXI2Q6ZQN5 318 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 LINC00299Q6ZSB3 139 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 SMIM20Q8N5G0 67 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 CST11Q9H112 138 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 LAMTOR3Q9UHA4 124 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 UFC1Q9Y3C8 167 aa0.51□□□□□ -2.33
VTA1-204ENST00000491881 A0A0D9SG42 100 aa0.5□□□□□ -2.33
VTA1-204ENST00000491881 SPTY2D1-AS1A0A0U1RR47 76 aa0.5□□□□□ -2.33
VTA1-204ENST00000491881 H3BQV1 296 aa0.5□□□□□ -2.33
VTA1-204ENST00000491881 CSN2P05814 226 aa0.5□□□□□ -2.33
VTA1-204ENST00000491881 FOXA3P55318 350 aaPredicted RBP0.5□□□□□ -2.33
VTA1-204ENST00000491881 TAS2R41P59536 307 aa0.5□□□□□ -2.33
VTA1-204ENST00000491881 DIAPH2-AS1Q14236 149 aa0.5□□□□□ -2.33
VTA1-204ENST00000491881 NDUFA11Q86Y39 141 aa0.5□□□□□ -2.33
VTA1-204ENST00000491881 ATOH7Q8N100 152 aa0.5□□□□□ -2.33
VTA1-204ENST00000491881 STX19Q8N4C7 294 aa0.5□□□□□ -2.33
VTA1-204ENST00000491881 CDC26Q8NHZ8 85 aa0.5□□□□□ -2.33
VTA1-204ENST00000491881 MED11Q9P086 117 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms