RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 NTM-AS1Q6ZSK4 140 aa5.42□□□□□ -1.54
LSM2-213ENST00000491421 DNAH8Q96JB1 4490 aa5.42□□□□□ -1.54
LSM2-213ENST00000491421 TRBV25-1A0A075B6N4 114 aa5.41□□□□□ -1.54
LSM2-213ENST00000491421 IGHV1-24A0A0C4DH33 117 aa5.41□□□□□ -1.54
LSM2-213ENST00000491421 F2Z2F3 143 aa5.41□□□□□ -1.54
LSM2-213ENST00000491421 ATP6V1G1O75348 118 aa5.41□□□□□ -1.54
LSM2-213ENST00000491421 HLA-DQA1P01909 254 aa5.41□□□□□ -1.54
LSM2-213ENST00000491421 TRGC1P0CF51 173 aa5.41□□□□□ -1.54
LSM2-213ENST00000491421 VPREB1P12018 145 aa5.41□□□□□ -1.54
LSM2-213ENST00000491421 RBX1P62877 108 aa5.41□□□□□ -1.54
LSM2-213ENST00000491421 GAGE6Q13070 117 aa5.41□□□□□ -1.54
LSM2-213ENST00000491421 MIAQ16674 131 aa5.41□□□□□ -1.54
LSM2-213ENST00000491421 C14orf177Q52M58 125 aa5.41□□□□□ -1.54
LSM2-213ENST00000491421 LYZL1Q6UWQ5 148 aa5.41□□□□□ -1.54
LSM2-213ENST00000491421 PLA2G1BP04054 148 aaKnown RBP5.4□□□□□ -1.54
LSM2-213ENST00000491421 NTF3P20783 257 aa5.4□□□□□ -1.54
LSM2-213ENST00000491421 NKX2-5P52952 324 aaPredicted RBP5.4□□□□□ -1.54
LSM2-213ENST00000491421 IQCJQ1A5X6 159 aa5.4□□□□□ -1.54
LSM2-213ENST00000491421 RASL11AQ6T310 242 aa5.4□□□□□ -1.54
LSM2-213ENST00000491421 CLPSL2Q6UWE3 100 aa5.4□□□□□ -1.54
LSM2-213ENST00000491421 AKAP14Q86UN6 197 aa5.4□□□□□ -1.54
LSM2-213ENST00000491421 LINC00269Q8N2A0 174 aa5.4□□□□□ -1.54
LSM2-213ENST00000491421 NUDT10Q8NFP7 164 aa5.4□□□□□ -1.54
LSM2-213ENST00000491421 NUDT11Q96G61 164 aa5.4□□□□□ -1.54
LSM2-213ENST00000491421 DPH3P1Q9H4G8 78 aa5.4□□□□□ -1.54
LSM2-213ENST00000491421 PRR34Q9NV39 138 aa5.4□□□□□ -1.54
LSM2-213ENST00000491421 CTRLP40313 264 aa5.39□□□□□ -1.55
LSM2-213ENST00000491421 SERTAD4-AS1Q5TG53 156 aa5.39□□□□□ -1.55
LSM2-213ENST00000491421 Q6ZNX1 250 aa5.39□□□□□ -1.55
LSM2-213ENST00000491421 SCXQ7RTU7 201 aa5.39□□□□□ -1.55
LSM2-213ENST00000491421 C9orf62Q8N4C0 152 aa5.39□□□□□ -1.55
LSM2-213ENST00000491421 CHAC1Q9BUX1 264 aa5.39□□□□□ -1.55
LSM2-213ENST00000491421 RPP21Q9H633 154 aaKnown RBP5.39□□□□□ -1.55
LSM2-213ENST00000491421 PCP4L1A6NKN8 68 aa5.38□□□□□ -1.55
LSM2-213ENST00000491421 K7EN84 100 aa5.38□□□□□ -1.55
LSM2-213ENST00000491421 PTTG1IPP53801 180 aa5.38□□□□□ -1.55
LSM2-213ENST00000491421 TWIST1Q15672 202 aa5.38□□□□□ -1.55
LSM2-213ENST00000491421 ALKAL2Q6UX46 152 aa5.38□□□□□ -1.55
LSM2-213ENST00000491421 TMEM243Q9BU79 118 aa5.38□□□□□ -1.55
LSM2-213ENST00000491421 RNASE7Q9H1E1 156 aaKnown RBP5.38□□□□□ -1.55
LSM2-213ENST00000491421 NIT2Q9NQR4 276 aa5.38□□□□□ -1.55
LSM2-213ENST00000491421 FLG2Q5D862 2391 aaPredicted RBP5.37□□□□□ -1.55
LSM2-213ENST00000491421 UBE2L6O14933 153 aa5.37□□□□□ -1.55
LSM2-213ENST00000491421 PRSS1P07477 247 aa5.37□□□□□ -1.55
LSM2-213ENST00000491421 BLOC1S1P78537 153 aa5.37□□□□□ -1.55
LSM2-213ENST00000491421 REG3AQ06141 175 aa5.37□□□□□ -1.55
LSM2-213ENST00000491421 DEFB104AQ8WTQ1 72 aa5.37□□□□□ -1.55
LSM2-213ENST00000491421 PGLYRP4Q96LB8 373 aa5.37□□□□□ -1.55
LSM2-213ENST00000491421 CNFNQ9BYD5 112 aa5.37□□□□□ -1.55
LSM2-213ENST00000491421 IGLV4-60A0A075B6I1 120 aa5.36□□□□□ -1.55
LSM2-213ENST00000491421 IGLV10-54A0A075B6I4 117 aa5.36□□□□□ -1.55
LSM2-213ENST00000491421 TRAV26-2A0A0B4J265 109 aa5.36□□□□□ -1.55
LSM2-213ENST00000491421 A0A1B0GUV1 79 aa5.36□□□□□ -1.55
LSM2-213ENST00000491421 TMEM250H0YL14 139 aa5.36□□□□□ -1.55
LSM2-213ENST00000491421 AMTP48728 403 aa5.36□□□□□ -1.55
LSM2-213ENST00000491421 CEBPGP53567 150 aa5.36□□□□□ -1.55
LSM2-213ENST00000491421 KRTAP26-1Q6PEX3 210 aa5.36□□□□□ -1.55
LSM2-213ENST00000491421 SMIM15Q7Z3B0 74 aa5.36□□□□□ -1.55
LSM2-213ENST00000491421 C20orf203Q8NBC4 194 aa5.36□□□□□ -1.55
LSM2-213ENST00000491421 CIRBP-AS1Q8TBR5 109 aa5.36□□□□□ -1.55
LSM2-213ENST00000491421 GTSF1Q8WW33 167 aa5.36□□□□□ -1.55
LSM2-213ENST00000491421 TRAV8-4A0A0B4J246 113 aa5.35□□□□□ -1.55
LSM2-213ENST00000491421 GATCO43716 136 aaKnown RBP5.35□□□□□ -1.55
LSM2-213ENST00000491421 GATD1Q8NB37 220 aa5.35□□□□□ -1.55
LSM2-213ENST00000491421 GFRA4Q9GZZ7 299 aa5.35□□□□□ -1.55
LSM2-213ENST00000491421 A8MWL6 223 aa5.34□□□□□ -1.55
LSM2-213ENST00000491421 FOXA3P55318 350 aaPredicted RBP5.34□□□□□ -1.55
LSM2-213ENST00000491421 FAM231DQ6ZW35 169 aa5.34□□□□□ -1.55
LSM2-213ENST00000491421 C9orf163Q8N9P6 203 aa5.34□□□□□ -1.55
LSM2-213ENST00000491421 LYPD6BQ8NI32 183 aa5.34□□□□□ -1.55
LSM2-213ENST00000491421 RPL39LQ96EH5 51 aaKnown RBP5.34□□□□□ -1.55
LSM2-213ENST00000491421 ALKBH7Q9BT30 221 aaPredicted RBP5.34□□□□□ -1.55
LSM2-213ENST00000491421 EIF5A2Q9GZV4 153 aaKnown RBP5.34□□□□□ -1.55
LSM2-213ENST00000491421 hDV102S1A0JD36 115 aa5.33□□□□□ -1.56
LSM2-213ENST00000491421 H3BS24 57 aa5.33□□□□□ -1.56
LSM2-213ENST00000491421 NCR2O95944 276 aa5.33□□□□□ -1.56
LSM2-213ENST00000491421 AMMECR1LQ6DCA0 310 aa5.33□□□□□ -1.56
LSM2-213ENST00000491421 TEX261Q6UWH6 196 aa5.33□□□□□ -1.56
LSM2-213ENST00000491421 BORCS7Q96B45 105 aa5.33□□□□□ -1.56
LSM2-213ENST00000491421 SMIM7Q9BQ49 75 aa5.33□□□□□ -1.56
LSM2-213ENST00000491421 IGKV3OR2-268A0A0C4DH90 116 aa5.32□□□□□ -1.56
LSM2-213ENST00000491421 SDHAF1A6NFY7 115 aa5.32□□□□□ -1.56
LSM2-213ENST00000491421 APCSP02743 223 aa5.32□□□□□ -1.56
LSM2-213ENST00000491421 KRTAP10-4P60372 401 aaPredicted RBP5.32□□□□□ -1.56
LSM2-213ENST00000491421 CNBPP62633 177 aaKnown RBP5.32□□□□□ -1.56
LSM2-213ENST00000491421 LBHQ53QV2 105 aaPredicted RBP5.32□□□□□ -1.56
LSM2-213ENST00000491421 LCE2AQ5TA79 106 aaPredicted RBP5.32□□□□□ -1.56
LSM2-213ENST00000491421 RNASEKQ6P5S7 137 aaKnown RBP5.32□□□□□ -1.56
LSM2-213ENST00000491421 ERASQ7Z444 233 aa5.32□□□□□ -1.56
LSM2-213ENST00000491421 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.32□□□□□ -1.56
LSM2-213ENST00000491421 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.31□□□□□ -1.56
LSM2-213ENST00000491421 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.31□□□□□ -1.56
LSM2-213ENST00000491421 A0A1B0GUT8 65 aa5.31□□□□□ -1.56
LSM2-213ENST00000491421 IGKV2-29A2NJV5 120 aaPredicted RBP5.31□□□□□ -1.56
LSM2-213ENST00000491421 GAGE12HA6NDE8 117 aa5.31□□□□□ -1.56
LSM2-213ENST00000491421 ZNF727A8MUV8 499 aa5.31□□□□□ -1.56
LSM2-213ENST00000491421 HIGD1CA8MV81 97 aa5.31□□□□□ -1.56
LSM2-213ENST00000491421 KRTAP29-1A8MX34 341 aaPredicted RBP5.31□□□□□ -1.56
LSM2-213ENST00000491421 H7C423 109 aa5.31□□□□□ -1.56
LSM2-213ENST00000491421 SMCPP49901 116 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms