RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 IGLC6P0CF74 106 aa6.4□□□□□ -1.38
TMEM39A-210ENST00000490099 Q5VSD8 79 aa6.4□□□□□ -1.38
TMEM39A-210ENST00000490099 NEXN-AS1Q8NBZ9 246 aa6.4□□□□□ -1.38
TMEM39A-210ENST00000490099 DNAJC30Q96LL9 226 aa6.4□□□□□ -1.38
TMEM39A-210ENST00000490099 FLG2Q5D862 2391 aaPredicted RBP6.4□□□□□ -1.39
TMEM39A-210ENST00000490099 ELOBQ15370 118 aa6.39□□□□□ -1.39
TMEM39A-210ENST00000490099 FER1L6-AS1Q8NA97 138 aa6.39□□□□□ -1.39
TMEM39A-210ENST00000490099 FRZBQ92765 325 aa6.39□□□□□ -1.39
TMEM39A-210ENST00000490099 KLK12Q9UKR0 248 aa6.39□□□□□ -1.39
TMEM39A-210ENST00000490099 DNAH8Q96JB1 4490 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 DMBT1Q9UGM3 2413 aaPredicted RBP6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 A0A1B0GW15 77 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 HIGD1CA8MV81 97 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 SMR3BP02814 79 aaPredicted RBP6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 INAFM2P0DMQ5 153 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 CTRLP40313 264 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 FOXA3P55318 350 aaPredicted RBP6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 CACNG7P62955 275 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 ENHOQ6UWT2 76 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 NTM-AS1Q6ZSK4 140 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 ATP5L2Q7Z4Y8 100 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 Q8N976 141 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 BAALCQ8WXS3 180 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 RMI2Q96E14 147 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 TPPP3Q9BW30 176 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 URGCP-MRPS24S4R325 110 aa6.38□□□□□ -1.39
TMEM39A-210ENST00000490099 VPS13BQ7Z7G8 4022 aa6.37□□□□□ -1.39
TMEM39A-210ENST00000490099 A0A087WX48 190 aa6.37□□□□□ -1.39
TMEM39A-210ENST00000490099 M0QY20 66 aa6.37□□□□□ -1.39
TMEM39A-210ENST00000490099 S100A8P05109 93 aa6.37□□□□□ -1.39
TMEM39A-210ENST00000490099 GZMBP10144 247 aa6.37□□□□□ -1.39
TMEM39A-210ENST00000490099 SPANXN1Q5VSR9 72 aa6.37□□□□□ -1.39
TMEM39A-210ENST00000490099 WDR73Q6P4I2 378 aa6.37□□□□□ -1.39
TMEM39A-210ENST00000490099 MUC21A0A0G2JKD1 596 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 MUC21A0A140T8X8 626 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 A0A1B0GUT8 65 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 LECT2O14960 151 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 Q0VG73 95 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 RIGQ13278 110 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 COX19Q49B96 90 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 TMEM97Q5BJF2 176 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 KRTAP26-1Q6PEX3 210 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 RASL11AQ6T310 242 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 LYZL1Q6UWQ5 148 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 CBLN2Q8IUK8 224 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 NUP35Q8NFH5 326 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 GTSF1Q8WW33 167 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 PGLYRP4Q96LB8 373 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 PRR34Q9NV39 138 aa6.36□□□□□ -1.39
TMEM39A-210ENST00000490099 TRBV24-1A0A075B6N3 115 aa6.35□□□□□ -1.39
TMEM39A-210ENST00000490099 HAMPP81172 84 aa6.35□□□□□ -1.39
TMEM39A-210ENST00000490099 ZNF56Q15929 161 aa6.35□□□□□ -1.39
TMEM39A-210ENST00000490099 IQCJQ1A5X6 159 aa6.35□□□□□ -1.39
TMEM39A-210ENST00000490099 MPV17L2Q567V2 206 aa6.35□□□□□ -1.39
TMEM39A-210ENST00000490099 SMIM15Q7Z3B0 74 aa6.35□□□□□ -1.39
TMEM39A-210ENST00000490099 UBE2WQ96B02 151 aa6.35□□□□□ -1.39
TMEM39A-210ENST00000490099 AP1S3Q96PC3 154 aa6.35□□□□□ -1.39
TMEM39A-210ENST00000490099 CNFNQ9BYD5 112 aa6.35□□□□□ -1.39
TMEM39A-210ENST00000490099 IGKV2D-24A0A075B6R9 120 aa6.34□□□□□ -1.39
TMEM39A-210ENST00000490099 F5H697 171 aa6.34□□□□□ -1.39
TMEM39A-210ENST00000490099 SCO1O75880 301 aa6.34□□□□□ -1.39
TMEM39A-210ENST00000490099 TRGC1P0CF51 173 aa6.34□□□□□ -1.39
TMEM39A-210ENST00000490099 PKIAP61925 76 aa6.34□□□□□ -1.39
TMEM39A-210ENST00000490099 HBBP68871 147 aa6.34□□□□□ -1.39
TMEM39A-210ENST00000490099 TWIST1Q15672 202 aa6.34□□□□□ -1.39
TMEM39A-210ENST00000490099 TMEM262E9PQX1 116 aa6.33□□□□□ -1.4
TMEM39A-210ENST00000490099 MT-ND6P03923 174 aa6.33□□□□□ -1.4
TMEM39A-210ENST00000490099 RBX1P62877 108 aa6.33□□□□□ -1.4
TMEM39A-210ENST00000490099 MIAQ16674 131 aa6.33□□□□□ -1.4
TMEM39A-210ENST00000490099 MRPL54Q6P161 138 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-210ENST00000490099 HERC1Q15751 4861 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 TGIF2-C20orf24A0A0A6YYL0 155 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 A0A1B0GXF2 115 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 H7C1H1 209 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 SMIM17P0DL12 118 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 NTF3P20783 257 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 SSTP61278 116 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 LINC01620Q4KN68 170 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 SUMO4Q6EEV6 95 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 YPEL4Q96NS1 127 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 CHCHD5Q9BSY4 110 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 CHAC1Q9BUX1 264 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 C1orf43Q9BWL3 253 aa6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-210ENST00000490099 MYCBP2O75592 4640 aa6.31□□□□□ -1.4
TMEM39A-210ENST00000490099 TRBV25-1A0A075B6N4 114 aa6.31□□□□□ -1.4
TMEM39A-210ENST00000490099 A0A1B0GUV1 79 aa6.31□□□□□ -1.4
TMEM39A-210ENST00000490099 HLA-DQA1P01909 254 aa6.31□□□□□ -1.4
TMEM39A-210ENST00000490099 ANGP03950 147 aaKnown RBP6.31□□□□□ -1.4
TMEM39A-210ENST00000490099 CAMPP49913 170 aa6.31□□□□□ -1.4
TMEM39A-210ENST00000490099 C14orf177Q52M58 125 aa6.31□□□□□ -1.4
TMEM39A-210ENST00000490099 SCXQ7RTU7 201 aa6.31□□□□□ -1.4
TMEM39A-210ENST00000490099 GATD1Q8NB37 220 aa6.31□□□□□ -1.4
TMEM39A-210ENST00000490099 GNB1LQ9BYB4 327 aa6.31□□□□□ -1.4
TMEM39A-210ENST00000490099 TMEM191AQ9H0A3 160 aa6.31□□□□□ -1.4
TMEM39A-210ENST00000490099 NIT2Q9NQR4 276 aa6.31□□□□□ -1.4
TMEM39A-210ENST00000490099 AP5S1Q9NUS5 200 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms