RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 NDUFA11Q86Y39 141 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 FAM223AQ8IWN6 122 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 IFI27L1Q96BM0 104 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 DMAC1Q96GE9 116 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 FAM167A-AS1Q96KT0 104 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 LIMD2Q9BT23 127 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 BPESC1Q9GZL8 116 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 DYNLRB1Q9NP97 96 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 MRPL36Q9P0J6 103 aaKnown RBP0.45□□□□□ -2.34
CCDC39-206ENST00000489868 PRO1854Q9UHT4 67 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 PXDNQ92626 1479 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 PIK3C2AO00443 1686 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 CUL7Q14999 1698 aa0.45□□□□□ -2.34
CCDC39-206ENST00000489868 THOC2Q8NI27 1593 aaKnown RBP0.45□□□□□ -2.34
CCDC39-206ENST00000489868 ABCC1P33527 1531 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 LMTK2Q8IWU2 1503 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 UGGT2Q9NYU1 1516 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 CCDC88AQ3V6T2 1871 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 PTPRMP28827 1452 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 IQSEC2Q5JU85 1478 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 NRXN1Q9ULB1 1477 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 SHANK2Q9UPX8 1470 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 TRBV6-7A0A0A0MS04 114 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 TRBV6-8A0A0A6YYG3 113 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 MYMXA0A1B0GTQ4 84 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 LOC285095A0A1B0GVY8 99 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 A0A1B0GWA3 101 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 NUPR2A6NF83 97 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 FAM223BA6NKX1 122 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 CEBPZOSA8MTT3 80 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 HIGD1CA8MV81 97 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 TMEM14DPA8MWL7 114 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 IQCF6A8MYZ5 107 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 F8WEM9 126 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 H3BVH4 76 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 HMGN4O00479 90 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 PPP1R17O96001 155 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 DNAL4O96015 105 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 PPYP01298 95 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 HMGN2P05204 90 aaKnown RBP0.44□□□□□ -2.34
CCDC39-206ENST00000489868 SAA2P0DJI9 122 aaPredicted RBP0.44□□□□□ -2.34
CCDC39-206ENST00000489868 COX8AP10176 69 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 SPINT3P49223 89 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 UBE2D1P51668 147 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 ELOF1P60002 83 aaKnown RBP0.44□□□□□ -2.34
CCDC39-206ENST00000489868 CNBPP62633 177 aaKnown RBP0.44□□□□□ -2.34
CCDC39-206ENST00000489868 SSBP1Q04837 148 aaKnown RBP0.44□□□□□ -2.34
CCDC39-206ENST00000489868 PLGLAQ15195 96 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 C1orf137Q5JT78 98 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 XAF1Q6GPH4 301 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 KRTAP26-1Q6PEX3 210 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 SMIM5Q71RC9 77 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 C20orf197Q8N268 126 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 C4orf3Q8WVX3 66 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 LINC01600Q96MT4 127 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 CDC42SE2Q9NRR3 84 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 NDUFA4L2Q9NRX3 87 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 TMEM14BQ9NUH8 114 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 PSENENQ9NZ42 101 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 ORMDL1Q9P0S3 153 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 GNG13Q9P2W3 67 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 ARL2-SNX15V9GYD0 113 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 CC2D2AQ9P2K1 1620 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 UNC13BO14795 1591 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 DIP2BQ9P265 1576 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 LAMC3Q9Y6N6 1575 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 SETBP1Q9Y6X0 1596 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 ARHGEF28Q8N1W1 1705 aaKnown RBP0.44□□□□□ -2.34
CCDC39-206ENST00000489868 KIAA1551Q9HCM1 1747 aa0.44□□□□□ -2.34
CCDC39-206ENST00000489868 EFCAB5A4FU69 1503 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 CUX1P39880 1505 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 ABCC2Q92887 1545 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 KIF14Q15058 1648 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 CCDC180Q9P1Z9 1646 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 LOC110117498A0A087WWA1 95 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 FXYD6-FXYD2A0A087WZ82 144 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 IGLV3-32A0A0A0MS00 114 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 A0A0J9YY99 117 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 LOC101927531A0A1B0GV80 90 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 TRBV6-4A0A1B0GX49 114 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 CLPSL1A2RUU4 121 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 D6R8Y8 96 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 F8VRH5 84 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 JMJD7-PLA2G4BH0Y9G9 81 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 FXYD1O00168 92 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 LEPROTL1O95214 131 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 IGLV3-1P01715 115 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 IGHV3-30P01768 117 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 ARMS2P0C7Q2 107 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 C3orf79P0CE67 100 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 IGHV3-30-5P0DP03 117 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 CCL3L1P16619 93 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 GCHFRP30047 84 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 SPAG11BQ08648 103 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 DEFB121Q5J5C9 76 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 ATP5EP2Q5VTU8 51 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 Q6JHZ5 121 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 SPAG11AQ6PDA7 123 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 BAGE3Q86Y29 109 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 BAGE2Q86Y30 109 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms