RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ZNF714Q96N38 554 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 SMR3AQ99954 134 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 ZNF471Q9BX82 626 aaPredicted RBP1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 Q9H521 79 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 SCN3BQ9NY72 215 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 COMMD3Q9UBI1 195 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 KLK12Q9UKR0 248 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 LHFPL6Q9Y693 200 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 COL6A5A8TX70 2615 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 ARHGAP32A7KAX9 2087 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 A8MWV9 139 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 CORTO00230 105 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 GNGT2O14610 69 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 SLC22A1O15245 554 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 TIMM17BO60830 172 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 ZNF737O75373 536 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 GYPBP06028 91 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 CDK5R1Q15078 307 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 C6orf52Q5T4I8 152 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 C10orf126Q8N4M7 172 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 OR4S1Q8NGB4 309 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 TMEM203Q969S6 136 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 MRPS24Q96EL2 167 aaKnown RBP1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 RETNLBQ9BQ08 111 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 PKD1L1Q8TDX9 2849 aa1.79□□□□□ -2.12
DEPDC1-204ENST00000489862 VWFP04275 2813 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 CR1P17927 2039 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 IGKV2D-26A0A0A0MRZ7 120 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 FAM25AB3EWG3 89 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 FAM25CB3EWG5 89 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 FAM25GB3EWG6 89 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 LYNX1G3V0Z9 82 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 H7C2G1 150 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 J3QRE1 110 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 CREBL2O60519 120 aaPredicted RBP1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 TRGC1P0CF51 173 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 SMIM6P0DI80 62 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 LYNX1P0DP58 116 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 RBP2P50120 134 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 NDUFA6P56556 154 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 QRFPP83859 136 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 KLRD1Q13241 179 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 EBI3Q14213 229 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 DEFB113Q30KQ7 82 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 PABPC1L2AQ5JQF8 200 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 C12orf73Q69YU5 71 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 TMEM91Q6ZNR0 172 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 OR5A2Q8NGI9 324 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 LSM2Q9Y333 95 aaKnown RBP1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 TIMM9Q9Y5J7 89 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 STAB1Q9NY15 2570 aa1.78□□□□□ -2.12
DEPDC1-204ENST00000489862 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.78□□□□□ -2.124e-8■■■■■ 30.4
DEPDC1-204ENST00000489862 DNAH3Q8TD57 4116 aa1.78□□□□□ -2.13
DEPDC1-204ENST00000489862 KIAA2026Q5HYC2 2103 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 A0A0J9YX75 114 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 A0A1W2PNM2 257 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 TMEM235A6NFC5 223 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 J3QR89 54 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 MSMBP08118 114 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 HRES1P13985 223 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 SMIM11AP58511 58 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 ROMO1P60602 79 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 RNASE10Q5GAN6 216 aaKnown RBP1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 MUCL1Q96DR8 90 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 CST9LQ9H4G1 147 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 RERGLQ9H628 205 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 CMC2Q9NRP2 79 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 C2CD3Q4AC94 2353 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 HIVEP2P31629 2446 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 TRGV10A0A0A0MS01 117 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 TRBV10-2A0A0K0K1G8 114 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 SMIM31A0A1B0GVY4 71 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 CCL25O15444 150 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 UBL3O95164 117 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 IGLV3-1P01715 115 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 TFF1P04155 84 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 CD2P06729 351 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 P0C880 135 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 CLLU1Q5K131 121 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 XAF1Q6GPH4 301 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 TEN1Q86WV5 123 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 C8orf59Q8N0T1 100 aaPredicted RBP1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 Q8N2B8 174 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 LINC00471Q8N535 108 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 Q8N814 137 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 Q8N9L7 120 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 C9orf163Q8N9P6 203 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 OR5D14Q8NGL3 314 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 DEDD2Q8WXF8 326 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 CHCHD1Q96BP2 118 aaKnown RBP1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 C20orf166-AS1Q96NR2 134 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 YPEL2Q96QA6 119 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 SCRT1Q9BWW7 348 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 TTTY10Q9BZA0 68 aa1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 TXNL4BQ9NX01 149 aaKnown RBP1.77□□□□□ -2.13
DEPDC1-204ENST00000489862 WNK2Q9Y3S1 2297 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 A0A087WXM4 84 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 LRCOL1A6NCL2 159 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 ODF3BA8MYP8 253 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 MRPS14O60783 128 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms