RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 LAMTOR2Q9Y2Q5 125 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 MUC17Q685J3 4493 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 D6R8Y8 96 aa4.97□□□□□ -1.61
EXOSC3-206ENST00000489414 J3KRW8 73 aa4.97□□□□□ -1.61
EXOSC3-206ENST00000489414 RNASE4P34096 147 aaKnown RBP4.97□□□□□ -1.61
EXOSC3-206ENST00000489414 EMP1P54849 157 aa4.97□□□□□ -1.61
EXOSC3-206ENST00000489414 PMCHL1Q16048 86 aa4.97□□□□□ -1.61
EXOSC3-206ENST00000489414 PSMG4Q5JS54 123 aa4.97□□□□□ -1.61
EXOSC3-206ENST00000489414 FAM19A2Q8N3H0 131 aa4.97□□□□□ -1.61
EXOSC3-206ENST00000489414 ODF3Q96PU9 254 aa4.97□□□□□ -1.61
EXOSC3-206ENST00000489414 VAMP8Q9BV40 100 aa4.97□□□□□ -1.61
EXOSC3-206ENST00000489414 CNFNQ9BYD5 112 aa4.97□□□□□ -1.61
EXOSC3-206ENST00000489414 AP5S1Q9NUS5 200 aa4.97□□□□□ -1.61
EXOSC3-206ENST00000489414 TRAV2A0A0B4J234 112 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 IGKV3D-20A0A0C4DH25 116 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 K7EQG2 157 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 LEPROTL1O95214 131 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 ZNF688P0C7X2 276 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 KRTAP10-8P60410 259 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 FAM159AQ6UWV7 190 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 AMN1Q8IY45 258 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 ZFAND2AQ8N6M9 145 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 OR10AG1Q8NH19 301 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 DCANP1Q8TF63 244 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 MAP1LC3CQ9BXW4 147 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 PRO1933Q9H354 126 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 MAP1LC3AQ9H492 121 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 PHLDA3Q9Y5J5 127 aa4.96□□□□□ -1.62
EXOSC3-206ENST00000489414 MUC21A0A0G2JKD1 596 aa4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 MUC21A0A140T8X8 626 aa4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 LINC00587B1AMM8 73 aa4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 H3BVH4 76 aa4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 SNAI2O43623 268 aa4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 C3orf79P0CE67 100 aa4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 DDTP30046 118 aa4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 MRPL51Q4U2R6 128 aaKnown RBP4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 MUC21Q5SSG8 566 aa4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 TEX43Q6ZNM6 134 aa4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 FOXI2Q6ZQN5 318 aa4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 TRPT1Q86TN4 253 aaKnown RBP4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 Q8N814 137 aa4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 DPH3P1Q9H4G8 78 aa4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 NXT2Q9NPJ8 142 aaKnown RBP4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 MRPS16Q9Y3D3 137 aaKnown RBP4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 TIMM8BQ9Y5J9 83 aaPredicted RBP4.95□□□□□ -1.62
EXOSC3-206ENST00000489414 IGHV1-24A0A0C4DH33 117 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 A0A0J9YX75 114 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 LOC389332A0A1B0GUA5 103 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 C7orf71A4D174 169 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 LRCOL1A6NCL2 159 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 KLLNB2CW77 178 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 HSBP1L1C9JCN9 74 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 F6UB75 175 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 PPP1R17O96001 155 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 SMIM17P0DL12 118 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 LINC01547P58512 204 aaPredicted RBP4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 ANXA2RQ3ZCQ2 193 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 ZNF664Q8N3J9 261 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 MRAP2Q96G30 205 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 FAM19A4Q96LR4 140 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 AP1S3Q96PC3 154 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 C11orf21Q9P2W6 132 aa4.94□□□□□ -1.62
EXOSC3-206ENST00000489414 A0A0J9YXV3 536 aa4.93□□□□□ -1.62
EXOSC3-206ENST00000489414 M0R381 172 aa4.93□□□□□ -1.62
EXOSC3-206ENST00000489414 IFI27P40305 119 aaPredicted RBP4.93□□□□□ -1.62
EXOSC3-206ENST00000489414 PRR9Q5T870 116 aa4.93□□□□□ -1.62
EXOSC3-206ENST00000489414 PET117Q6UWS5 81 aa4.93□□□□□ -1.62
EXOSC3-206ENST00000489414 ZNF705AQ6ZN79 300 aaPredicted RBP4.93□□□□□ -1.62
EXOSC3-206ENST00000489414 STHQ8IWL8 128 aa4.93□□□□□ -1.62
EXOSC3-206ENST00000489414 C20orf144Q9BQM9 153 aa4.93□□□□□ -1.62
EXOSC3-206ENST00000489414 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
EXOSC3-206ENST00000489414 MSRB1Q9NZV6 116 aa4.93□□□□□ -1.62
EXOSC3-206ENST00000489414 PAM16Q9Y3D7 125 aa4.93□□□□□ -1.62
EXOSC3-206ENST00000489414 TRGV11A0A075B6L2 103 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 TRAV12-3A0A0B4J271 114 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 TNFRSF6BO95407 300 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 NCR2O95944 276 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 NPYP01303 97 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 IGKV3-20P01619 116 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 HBDP02042 147 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 EVI2AP22794 236 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 DEFB1P60022 68 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 ESRGQ1W209 222 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 SPATA45Q537H7 98 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 RNF185Q96GF1 192 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 URB1-AS1Q96HZ7 61 aa4.92□□□□□ -1.62
EXOSC3-206ENST00000489414 IGHV1OR15-1A0A075B7D0 117 aa4.91□□□□□ -1.62
EXOSC3-206ENST00000489414 TRAV9-2A0A087WT02 112 aa4.91□□□□□ -1.62
EXOSC3-206ENST00000489414 SMKR1H3BMG3 65 aa4.91□□□□□ -1.62
EXOSC3-206ENST00000489414 SYS1-DBNDD2H3BUS1 97 aa4.91□□□□□ -1.62
EXOSC3-206ENST00000489414 CRXO43186 299 aaPredicted RBP4.91□□□□□ -1.62
EXOSC3-206ENST00000489414 MGPP08493 103 aa4.91□□□□□ -1.62
EXOSC3-206ENST00000489414 DEFB131AP59861 70 aa4.91□□□□□ -1.62
EXOSC3-206ENST00000489414 DAD1P61803 113 aa4.91□□□□□ -1.62
EXOSC3-206ENST00000489414 LBHQ53QV2 105 aaPredicted RBP4.91□□□□□ -1.62
EXOSC3-206ENST00000489414 MIEN1Q9BRT3 115 aa4.91□□□□□ -1.62
EXOSC3-206ENST00000489414 H0Y8G0 127 aa4.9□□□□□ -1.63
EXOSC3-206ENST00000489414 K7EMI3 77 aa4.9□□□□□ -1.63
EXOSC3-206ENST00000489414 GNRH2O43555 120 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms