RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 C20orf203Q8NBC4 194 aa5.97□□□□□ -1.45
SNX17-207ENST00000489402 RNF213Q63HN8 5207 aa5.97□□□□□ -1.45
SNX17-207ENST00000489402 IGLV4-60A0A075B6I1 120 aa5.96□□□□□ -1.46
SNX17-207ENST00000489402 A0A087WYN8 130 aa5.96□□□□□ -1.46
SNX17-207ENST00000489402 XKRY2A2RUG3 117 aa5.96□□□□□ -1.46
SNX17-207ENST00000489402 ATP6V1G1O75348 118 aa5.96□□□□□ -1.46
SNX17-207ENST00000489402 TRGC1P0CF51 173 aa5.96□□□□□ -1.46
SNX17-207ENST00000489402 RPL35P42766 123 aaKnown RBP5.96□□□□□ -1.46
SNX17-207ENST00000489402 RAB5CP51148 216 aa5.96□□□□□ -1.46
SNX17-207ENST00000489402 SUMO4Q6EEV6 95 aa5.96□□□□□ -1.46
SNX17-207ENST00000489402 RASL11AQ6T310 242 aa5.96□□□□□ -1.46
SNX17-207ENST00000489402 SLC51BQ86UW2 128 aa5.96□□□□□ -1.46
SNX17-207ENST00000489402 OR2D3Q8NGH3 330 aa5.96□□□□□ -1.46
SNX17-207ENST00000489402 C7orf33Q8WU49 177 aa5.96□□□□□ -1.46
SNX17-207ENST00000489402 PGLYRP4Q96LB8 373 aa5.96□□□□□ -1.46
SNX17-207ENST00000489402 BCL2L11O43521 198 aa5.95□□□□□ -1.46
SNX17-207ENST00000489402 IGLC6P0CF74 106 aa5.95□□□□□ -1.46
SNX17-207ENST00000489402 CHTF8P0CG12 524 aa5.95□□□□□ -1.46
SNX17-207ENST00000489402 AMTP48728 403 aa5.95□□□□□ -1.46
SNX17-207ENST00000489402 EIF5AP63241 154 aaKnown RBP5.95□□□□□ -1.46
SNX17-207ENST00000489402 COTL1Q14019 142 aa5.95□□□□□ -1.46
SNX17-207ENST00000489402 CENPWQ5EE01 88 aa5.95□□□□□ -1.46
SNX17-207ENST00000489402 CFAP161Q6P656 301 aa5.95□□□□□ -1.46
SNX17-207ENST00000489402 SPACA4Q8TDM5 124 aa5.95□□□□□ -1.46
SNX17-207ENST00000489402 MANBALQ9NQG1 85 aa5.95□□□□□ -1.46
SNX17-207ENST00000489402 NIT2Q9NQR4 276 aa5.95□□□□□ -1.46
SNX17-207ENST00000489402 KANTRA0A1W2PQU2 76 aa5.94□□□□□ -1.46
SNX17-207ENST00000489402 LINC00862A6NCI5 91 aa5.94□□□□□ -1.46
SNX17-207ENST00000489402 F2Z2F3 143 aa5.94□□□□□ -1.46
SNX17-207ENST00000489402 SLPIP03973 132 aa5.94□□□□□ -1.46
SNX17-207ENST00000489402 CLLU1Q5K131 121 aa5.94□□□□□ -1.46
SNX17-207ENST00000489402 SLC7A5P1Q8MH63 180 aa5.94□□□□□ -1.46
SNX17-207ENST00000489402 C11orf52Q96A22 123 aa5.94□□□□□ -1.46
SNX17-207ENST00000489402 GFRA4Q9GZZ7 299 aa5.94□□□□□ -1.46
SNX17-207ENST00000489402 PLAC8Q9NZF1 115 aa5.94□□□□□ -1.46
SNX17-207ENST00000489402 GNG13Q9P2W3 67 aa5.94□□□□□ -1.46
SNX17-207ENST00000489402 KRTAP9-6A0A140TA67 174 aa5.93□□□□□ -1.46
SNX17-207ENST00000489402 PHOX2AO14813 284 aa5.93□□□□□ -1.46
SNX17-207ENST00000489402 IFNA1P01562 189 aa5.93□□□□□ -1.46
SNX17-207ENST00000489402 GNG4P50150 75 aa5.93□□□□□ -1.46
SNX17-207ENST00000489402 SMIM12Q96EX1 92 aa5.93□□□□□ -1.46
SNX17-207ENST00000489402 BIN3Q9NQY0 253 aa5.93□□□□□ -1.46
SNX17-207ENST00000489402 IGKV3OR2-268A0A0C4DH90 116 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 C19orf71A6NCJ1 209 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 GAGE12HA6NDE8 117 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 TEX46H3BTG2 121 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 NDUFS6O75380 124 aaKnown RBP5.92□□□□□ -1.46
SNX17-207ENST00000489402 NTF3P20783 257 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 RPS10P46783 165 aaKnown RBP5.92□□□□□ -1.46
SNX17-207ENST00000489402 CCL20P78556 96 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 COX6A2Q02221 97 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 MAJINQ3KP22 176 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 AMMECR1LQ6DCA0 310 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 LYZL1Q6UWQ5 148 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 C15orf56Q8N910 161 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 GTSF1Q8WW33 167 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 MED9Q9NWA0 146 aa5.92□□□□□ -1.46
SNX17-207ENST00000489402 IGKV2-24A0A0C4DH68 120 aa5.91□□□□□ -1.46
SNX17-207ENST00000489402 S100A1P23297 94 aa5.91□□□□□ -1.46
SNX17-207ENST00000489402 HIGD2BQ4VC39 106 aa5.91□□□□□ -1.46
SNX17-207ENST00000489402 ALKAL2Q6UX46 152 aa5.91□□□□□ -1.46
SNX17-207ENST00000489402 PKIGQ9Y2B9 76 aa5.91□□□□□ -1.46
SNX17-207ENST00000489402 TRAV1-1A0A0B4J248 108 aa5.9□□□□□ -1.46
SNX17-207ENST00000489402 RAB19A4D1S5 217 aa5.9□□□□□ -1.46
SNX17-207ENST00000489402 PDE6DO43924 150 aa5.9□□□□□ -1.46
SNX17-207ENST00000489402 CTRLP40313 264 aa5.9□□□□□ -1.46
SNX17-207ENST00000489402 RAB14P61106 215 aa5.9□□□□□ -1.46
SNX17-207ENST00000489402 TWIST1Q15672 202 aa5.9□□□□□ -1.46
SNX17-207ENST00000489402 RNASEKQ6P5S7 137 aaKnown RBP5.9□□□□□ -1.46
SNX17-207ENST00000489402 STPG4Q8N801 248 aa5.9□□□□□ -1.46
SNX17-207ENST00000489402 CHCHD10Q8WYQ3 142 aaPredicted RBP5.9□□□□□ -1.46
SNX17-207ENST00000489402 GVQW2A0A096LPI5 108 aaPredicted RBP5.89□□□□□ -1.47
SNX17-207ENST00000489402 H7C423 109 aa5.89□□□□□ -1.47
SNX17-207ENST00000489402 NCR2O95944 276 aa5.89□□□□□ -1.47
SNX17-207ENST00000489402 APCSP02743 223 aa5.89□□□□□ -1.47
SNX17-207ENST00000489402 PRR3P79522 188 aaKnown RBP5.89□□□□□ -1.47
SNX17-207ENST00000489402 MEF2BQ02080 365 aaPredicted RBP5.89□□□□□ -1.47
SNX17-207ENST00000489402 EIF5AL1Q6IS14 154 aaKnown RBP5.89□□□□□ -1.47
SNX17-207ENST00000489402 SMIM15Q7Z3B0 74 aa5.89□□□□□ -1.47
SNX17-207ENST00000489402 PRSS3P2Q8NHM4 247 aa5.89□□□□□ -1.47
SNX17-207ENST00000489402 LINC01600Q96MT4 127 aa5.89□□□□□ -1.47
SNX17-207ENST00000489402 FAM210AQ96ND0 272 aa5.89□□□□□ -1.47
SNX17-207ENST00000489402 LINC00474Q9P2X8 69 aa5.89□□□□□ -1.47
SNX17-207ENST00000489402 TRAV26-2A0A0B4J265 109 aa5.88□□□□□ -1.47
SNX17-207ENST00000489402 FGF6P10767 208 aa5.88□□□□□ -1.47
SNX17-207ENST00000489402 GATD1Q8NB37 220 aa5.88□□□□□ -1.47
SNX17-207ENST00000489402 LYPD6BQ8NI32 183 aa5.88□□□□□ -1.47
SNX17-207ENST00000489402 CNFNQ9BYD5 112 aa5.88□□□□□ -1.47
SNX17-207ENST00000489402 TRBV20OR9-2A0A075B6H5 130 aa5.87□□□□□ -1.47
SNX17-207ENST00000489402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.87□□□□□ -1.47
SNX17-207ENST00000489402 A0A096LNI7 61 aa5.87□□□□□ -1.47
SNX17-207ENST00000489402 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
SNX17-207ENST00000489402 IGKV2-29A2NJV5 120 aaPredicted RBP5.87□□□□□ -1.47
SNX17-207ENST00000489402 ZNF25P17030 456 aaPredicted RBP5.87□□□□□ -1.47
SNX17-207ENST00000489402 REG3GQ6UW15 175 aa5.87□□□□□ -1.47
SNX17-207ENST00000489402 SPINK6Q6UWN8 80 aa5.87□□□□□ -1.47
SNX17-207ENST00000489402 NUDT10Q8NFP7 164 aa5.87□□□□□ -1.47
SNX17-207ENST00000489402 NUDT11Q96G61 164 aa5.87□□□□□ -1.47
SNX17-207ENST00000489402 BTF3L4Q96K17 158 aa5.87□□□□□ -1.47
SNX17-207ENST00000489402 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms