RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 GAGE2AQ6NT46 116 aa13.63□□□□□ -0.23
POLR2J3-205ENST00000489144 C8orf49Q96NF6 230 aa13.63□□□□□ -0.23
POLR2J3-205ENST00000489144 IMUPQ9GZP8 106 aa13.63□□□□□ -0.23
POLR2J3-205ENST00000489144 SMKR1H3BMG3 65 aa13.62□□□□□ -0.23
POLR2J3-205ENST00000489144 SLURP1P55000 103 aa13.62□□□□□ -0.23
POLR2J3-205ENST00000489144 PMVKQ15126 192 aa13.62□□□□□ -0.23
POLR2J3-205ENST00000489144 MYOZ3Q8TDC0 251 aa13.62□□□□□ -0.23
POLR2J3-205ENST00000489144 RHPN1-AS1Q9BWJ2 59 aa13.62□□□□□ -0.23
POLR2J3-205ENST00000489144 HRCT1Q6UXD1 115 aa13.61□□□□□ -0.23
POLR2J3-205ENST00000489144 U3KQE9 123 aa13.61□□□□□ -0.23
POLR2J3-205ENST00000489144 F8P00451 2351 aa13.61□□□□□ -0.23
POLR2J3-205ENST00000489144 CRYGDP07320 174 aa13.61□□□□□ -0.23
POLR2J3-205ENST00000489144 Q8N2B8 174 aa13.6□□□□□ -0.23
POLR2J3-205ENST00000489144 FAM240AA0A1B0GVK7 77 aa13.6□□□□□ -0.23
POLR2J3-205ENST00000489144 HOXD3P31249 432 aaPredicted RBP13.6□□□□□ -0.23
POLR2J3-205ENST00000489144 GPHB5Q86YW7 130 aa13.6□□□□□ -0.23
POLR2J3-205ENST00000489144 NXT2Q9NPJ8 142 aaKnown RBP13.6□□□□□ -0.23
POLR2J3-205ENST00000489144 ELANEP08246 267 aa13.59□□□□□ -0.23
POLR2J3-205ENST00000489144 PDE6HQ13956 83 aa13.59□□□□□ -0.23
POLR2J3-205ENST00000489144 C20orf173Q96LM9 149 aa13.59□□□□□ -0.23
POLR2J3-205ENST00000489144 DAZ1Q9NQZ3 744 aaKnown RBP13.59□□□□□ -0.23
POLR2J3-205ENST00000489144 H3BMM0 161 aa13.59□□□□□ -0.23
POLR2J3-205ENST00000489144 LYZL1Q6UWQ5 148 aa13.59□□□□□ -0.23
POLR2J3-205ENST00000489144 UBE2WQ96B02 151 aa13.59□□□□□ -0.23
POLR2J3-205ENST00000489144 C16orf92Q96LL3 132 aa13.59□□□□□ -0.23
POLR2J3-205ENST00000489144 ZNF580Q9UK33 172 aa13.59□□□□□ -0.23
POLR2J3-205ENST00000489144 C2CD3Q4AC94 2353 aa13.58□□□□□ -0.24
POLR2J3-205ENST00000489144 IGHV7-4-1A0A0J9YVY3 117 aa13.58□□□□□ -0.24
POLR2J3-205ENST00000489144 ATP5G1P05496 136 aa13.58□□□□□ -0.24
POLR2J3-205ENST00000489144 CRYGAP11844 174 aa13.58□□□□□ -0.24
POLR2J3-205ENST00000489144 CEMP1Q6PRD7 247 aaPredicted RBP13.58□□□□□ -0.24
POLR2J3-205ENST00000489144 KLHL30-AS1Q8NEE0 82 aa13.58□□□□□ -0.24
POLR2J3-205ENST00000489144 TRBV6-1A0A0K0K1D8 114 aa13.57□□□□□ -0.24
POLR2J3-205ENST00000489144 CD28P10747 220 aa13.57□□□□□ -0.24
POLR2J3-205ENST00000489144 LYPD1Q8N2G4 141 aa13.57□□□□□ -0.24
POLR2J3-205ENST00000489144 TMEM86BQ8N661 226 aa13.57□□□□□ -0.24
POLR2J3-205ENST00000489144 DPH3Q96FX2 82 aa13.57□□□□□ -0.24
POLR2J3-205ENST00000489144 F6UB75 175 aa13.57□□□□□ -0.24
POLR2J3-205ENST00000489144 CFC1BP0CG36 223 aa13.57□□□□□ -0.24
POLR2J3-205ENST00000489144 CFC1P0CG37 223 aa13.57□□□□□ -0.24
POLR2J3-205ENST00000489144 SCGB1D4Q6XE38 83 aa13.57□□□□□ -0.24
POLR2J3-205ENST00000489144 UBE2E2Q96LR5 201 aa13.57□□□□□ -0.24
POLR2J3-205ENST00000489144 Q5XG85 94 aa13.56□□□□□ -0.24
POLR2J3-205ENST00000489144 PRO1854Q9UHT4 67 aa13.56□□□□□ -0.24
POLR2J3-205ENST00000489144 COX7CP15954 63 aa13.56□□□□□ -0.24
POLR2J3-205ENST00000489144 OVOL1O14753 267 aa13.55□□□□□ -0.24
POLR2J3-205ENST00000489144 TMEM75Q8N9X5 138 aa13.55□□□□□ -0.24
POLR2J3-205ENST00000489144 LINC01006Q8NI28 216 aa13.55□□□□□ -0.24
POLR2J3-205ENST00000489144 TENM1Q9UKZ4 2725 aa13.55□□□□□ -0.24
POLR2J3-205ENST00000489144 CRIP1P50238 77 aa13.55□□□□□ -0.24
POLR2J3-205ENST00000489144 ZNF815PA8K554 130 aa13.54□□□□□ -0.24
POLR2J3-205ENST00000489144 LINC01620Q4KN68 170 aa13.54□□□□□ -0.24
POLR2J3-205ENST00000489144 CYSRT1A8MQ03 144 aa13.54□□□□□ -0.24
POLR2J3-205ENST00000489144 PRO0628Q9UI54 55 aa13.54□□□□□ -0.24
POLR2J3-205ENST00000489144 TRBV10-2A0A0K0K1G8 114 aa13.53□□□□□ -0.24
POLR2J3-205ENST00000489144 TMEM89A2RUT3 159 aa13.53□□□□□ -0.24
POLR2J3-205ENST00000489144 H7C1H1 209 aa13.53□□□□□ -0.24
POLR2J3-205ENST00000489144 RNASE1P07998 156 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-205ENST00000489144 ZNF80P51504 273 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-205ENST00000489144 SEC61GP60059 68 aa13.53□□□□□ -0.24
POLR2J3-205ENST00000489144 ATXN8Q156A1 80 aa13.53□□□□□ -0.24
POLR2J3-205ENST00000489144 PLEKHB2Q96CS7 222 aa13.53□□□□□ -0.24
POLR2J3-205ENST00000489144 F8VRH5 84 aa13.52□□□□□ -0.24
POLR2J3-205ENST00000489144 P0DMU3 169 aa13.52□□□□□ -0.24
POLR2J3-205ENST00000489144 FAM231AP0DMU4 169 aa13.52□□□□□ -0.24
POLR2J3-205ENST00000489144 FAM231CP0DMU5 169 aa13.52□□□□□ -0.24
POLR2J3-205ENST00000489144 MALP21145 153 aa13.52□□□□□ -0.24
POLR2J3-205ENST00000489144 HILS1P60008 231 aa13.52□□□□□ -0.24
POLR2J3-205ENST00000489144 RNF152Q8N8N0 203 aa13.52□□□□□ -0.24
POLR2J3-205ENST00000489144 Q8N8P6 123 aa13.52□□□□□ -0.24
POLR2J3-205ENST00000489144 LINC00477Q96M19 166 aa13.52□□□□□ -0.25
POLR2J3-205ENST00000489144 TRACP01848 142 aa13.51□□□□□ -0.25
POLR2J3-205ENST00000489144 SLC50A1Q9BRV3 221 aa13.51□□□□□ -0.25
POLR2J3-205ENST00000489144 AGPAT4-IT1Q9H0P7 198 aa13.51□□□□□ -0.25
POLR2J3-205ENST00000489144 TRAV12-1A0A0B4J245 112 aa13.5□□□□□ -0.25
POLR2J3-205ENST00000489144 TMEM258P61165 79 aa13.5□□□□□ -0.25
POLR2J3-205ENST00000489144 PRR25Q96S07 402 aa13.5□□□□□ -0.25
POLR2J3-205ENST00000489144 ZNF256Q9Y2P7 627 aaPredicted RBP13.5□□□□□ -0.25
POLR2J3-205ENST00000489144 TINCRA0A1B0GVN0 87 aa13.49□□□□□ -0.25
POLR2J3-205ENST00000489144 SOCS3O14543 225 aa13.49□□□□□ -0.25
POLR2J3-205ENST00000489144 OXTP01178 125 aa13.49□□□□□ -0.25
POLR2J3-205ENST00000489144 VWFP04275 2813 aa13.49□□□□□ -0.25
POLR2J3-205ENST00000489144 C2orf48Q96LS8 159 aa13.49□□□□□ -0.25
POLR2J3-205ENST00000489144 JPT2Q9H910 190 aa13.49□□□□□ -0.25
POLR2J3-205ENST00000489144 MAST4O15021 2626 aa13.49□□□□□ -0.25
POLR2J3-205ENST00000489144 TMEM170BQ5T4T1 132 aa13.48□□□□□ -0.25
POLR2J3-205ENST00000489144 C4orf3Q8WVX3 66 aa13.48□□□□□ -0.25
POLR2J3-205ENST00000489144 RNF185Q96GF1 192 aa13.48□□□□□ -0.25
POLR2J3-205ENST00000489144 SH2D1AO60880 128 aa13.48□□□□□ -0.25
POLR2J3-205ENST00000489144 DEFB121Q5J5C9 76 aa13.48□□□□□ -0.25
POLR2J3-205ENST00000489144 ATRQ13535 2644 aa13.48□□□□□ -0.25
POLR2J3-205ENST00000489144 IGKV3-20P01619 116 aa13.47□□□□□ -0.25
POLR2J3-205ENST00000489144 K7EMT4 169 aa13.47□□□□□ -0.25
POLR2J3-205ENST00000489144 IGHV3-30P01768 117 aa13.47□□□□□ -0.25
POLR2J3-205ENST00000489144 IGHV3-30-5P0DP03 117 aa13.47□□□□□ -0.25
POLR2J3-205ENST00000489144 IGLV2-18A0A075B6J9 118 aa13.46□□□□□ -0.25
POLR2J3-205ENST00000489144 hADV29S1A0JD25 119 aa13.46□□□□□ -0.25
POLR2J3-205ENST00000489144 GAS8-AS1O95177 125 aa13.46□□□□□ -0.25
POLR2J3-205ENST00000489144 NSUN5P1Q3KNT7 163 aa13.46□□□□□ -0.25
POLR2J3-205ENST00000489144 C2orf82Q6UX34 121 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms