RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 ATRAIDQ6UW56 229 aa9.14□□□□□ -0.95
SPTLC1-207ENST00000488921 LYZL1Q6UWQ5 148 aa9.14□□□□□ -0.95
SPTLC1-207ENST00000488921 PGLYRP4Q96LB8 373 aa9.14□□□□□ -0.95
SPTLC1-207ENST00000488921 CHCHD5Q9BSY4 110 aa9.14□□□□□ -0.95
SPTLC1-207ENST00000488921 TMEM242Q9NWH2 141 aa9.14□□□□□ -0.95
SPTLC1-207ENST00000488921 TRBV25-1A0A075B6N4 114 aa9.13□□□□□ -0.95
SPTLC1-207ENST00000488921 SMIM27A0A1W2PRY6 76 aa9.13□□□□□ -0.95
SPTLC1-207ENST00000488921 HIGD1CA8MV81 97 aa9.13□□□□□ -0.95
SPTLC1-207ENST00000488921 LECT2O14960 151 aa9.13□□□□□ -0.95
SPTLC1-207ENST00000488921 S100A1P23297 94 aa9.13□□□□□ -0.95
SPTLC1-207ENST00000488921 FOXA3P55318 350 aaPredicted RBP9.13□□□□□ -0.95
SPTLC1-207ENST00000488921 WFDC2Q14508 124 aa9.13□□□□□ -0.95
SPTLC1-207ENST00000488921 WDR73Q6P4I2 378 aa9.13□□□□□ -0.95
SPTLC1-207ENST00000488921 Q8N976 141 aa9.13□□□□□ -0.95
SPTLC1-207ENST00000488921 C1orf43Q9BWL3 253 aa9.13□□□□□ -0.95
SPTLC1-207ENST00000488921 DNAH8Q96JB1 4490 aa9.13□□□□□ -0.95
SPTLC1-207ENST00000488921 ANGP03950 147 aaKnown RBP9.12□□□□□ -0.95
SPTLC1-207ENST00000488921 CTRLP40313 264 aa9.12□□□□□ -0.95
SPTLC1-207ENST00000488921 TWIST1Q15672 202 aa9.12□□□□□ -0.95
SPTLC1-207ENST00000488921 MPV17L2Q567V2 206 aa9.12□□□□□ -0.95
SPTLC1-207ENST00000488921 Q5VSD8 79 aa9.12□□□□□ -0.95
SPTLC1-207ENST00000488921 SUMO4Q6EEV6 95 aa9.12□□□□□ -0.95
SPTLC1-207ENST00000488921 SMIM15Q7Z3B0 74 aa9.12□□□□□ -0.95
SPTLC1-207ENST00000488921 GTSF1Q8WW33 167 aa9.12□□□□□ -0.95
SPTLC1-207ENST00000488921 BAALCQ8WXS3 180 aa9.12□□□□□ -0.95
SPTLC1-207ENST00000488921 IMMP2LQ96T52 175 aa9.12□□□□□ -0.95
SPTLC1-207ENST00000488921 DPH3P1Q9H4G8 78 aa9.12□□□□□ -0.95
SPTLC1-207ENST00000488921 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.11□□□□□ -0.95
SPTLC1-207ENST00000488921 A0A1B0GUT8 65 aa9.11□□□□□ -0.95
SPTLC1-207ENST00000488921 M0QY20 66 aa9.11□□□□□ -0.95
SPTLC1-207ENST00000488921 RIGQ13278 110 aa9.11□□□□□ -0.95
SPTLC1-207ENST00000488921 C14orf177Q52M58 125 aa9.11□□□□□ -0.95
SPTLC1-207ENST00000488921 NUP35Q8NFH5 326 aa9.11□□□□□ -0.95
SPTLC1-207ENST00000488921 IGHV1-24A0A0C4DH33 117 aa9.1□□□□□ -0.95
SPTLC1-207ENST00000488921 FAM229AH3BQW9 127 aa9.1□□□□□ -0.95
SPTLC1-207ENST00000488921 NTF3P20783 257 aa9.1□□□□□ -0.95
SPTLC1-207ENST00000488921 MIAQ16674 131 aa9.1□□□□□ -0.95
SPTLC1-207ENST00000488921 IQCJQ1A5X6 159 aa9.1□□□□□ -0.95
SPTLC1-207ENST00000488921 RASL11AQ6T310 242 aa9.1□□□□□ -0.95
SPTLC1-207ENST00000488921 NTM-AS1Q6ZSK4 140 aa9.1□□□□□ -0.95
SPTLC1-207ENST00000488921 CNFNQ9BYD5 112 aa9.1□□□□□ -0.95
SPTLC1-207ENST00000488921 FAT1Q14517 4588 aa9.1□□□□□ -0.95
SPTLC1-207ENST00000488921 S100A8P05109 93 aa9.09□□□□□ -0.95
SPTLC1-207ENST00000488921 ENHOQ6UWT2 76 aa9.09□□□□□ -0.95
SPTLC1-207ENST00000488921 BTF3L4Q96K17 158 aa9.09□□□□□ -0.95
SPTLC1-207ENST00000488921 NIT2Q9NQR4 276 aa9.09□□□□□ -0.95
SPTLC1-207ENST00000488921 VPS13BQ7Z7G8 4022 aa9.09□□□□□ -0.95
SPTLC1-207ENST00000488921 A0A1B0GW15 77 aa9.08□□□□□ -0.96
SPTLC1-207ENST00000488921 ATP6V1G1O75348 118 aa9.08□□□□□ -0.96
SPTLC1-207ENST00000488921 SMR3BP02814 79 aaPredicted RBP9.08□□□□□ -0.96
SPTLC1-207ENST00000488921 GAGE6Q13070 117 aa9.08□□□□□ -0.96
SPTLC1-207ENST00000488921 TRAV9-1A0A075B6T8 112 aa9.07□□□□□ -0.96
SPTLC1-207ENST00000488921 INAFM2P0DMQ5 153 aa9.07□□□□□ -0.96
SPTLC1-207ENST00000488921 RBX1P62877 108 aa9.07□□□□□ -0.96
SPTLC1-207ENST00000488921 HAMPP81172 84 aa9.07□□□□□ -0.96
SPTLC1-207ENST00000488921 Q6ZSA8 131 aa9.07□□□□□ -0.96
SPTLC1-207ENST00000488921 ATP5L2Q7Z4Y8 100 aa9.07□□□□□ -0.96
SPTLC1-207ENST00000488921 SMCO4Q9NRQ5 59 aa9.07□□□□□ -0.96
SPTLC1-207ENST00000488921 HLA-DQA1P01909 254 aa9.06□□□□□ -0.96
SPTLC1-207ENST00000488921 CAMPP49913 170 aa9.06□□□□□ -0.96
SPTLC1-207ENST00000488921 MRPL54Q6P161 138 aaKnown RBP9.06□□□□□ -0.96
SPTLC1-207ENST00000488921 TMEM243Q9BU79 118 aa9.06□□□□□ -0.96
SPTLC1-207ENST00000488921 PRR34Q9NV39 138 aa9.06□□□□□ -0.96
SPTLC1-207ENST00000488921 FAM30AQ9NZY2 134 aa9.06□□□□□ -0.96
SPTLC1-207ENST00000488921 UBE2L6O14933 153 aa9.05□□□□□ -0.96
SPTLC1-207ENST00000488921 HBBP68871 147 aa9.05□□□□□ -0.96
SPTLC1-207ENST00000488921 COTL1Q14019 142 aa9.05□□□□□ -0.96
SPTLC1-207ENST00000488921 LINC00269Q8N2A0 174 aa9.05□□□□□ -0.96
SPTLC1-207ENST00000488921 CLPSL2Q6UWE3 100 aa9.04□□□□□ -0.96
SPTLC1-207ENST00000488921 A0A1B0GUV1 79 aa9.03□□□□□ -0.96
SPTLC1-207ENST00000488921 AMTP48728 403 aa9.03□□□□□ -0.96
SPTLC1-207ENST00000488921 REG3AQ06141 175 aa9.03□□□□□ -0.96
SPTLC1-207ENST00000488921 TMEM191AQ9H0A3 160 aa9.03□□□□□ -0.96
SPTLC1-207ENST00000488921 TRAV8-4A0A0B4J246 113 aa9.02□□□□□ -0.97
SPTLC1-207ENST00000488921 USP17L23D6RBM5 183 aa9.02□□□□□ -0.97
SPTLC1-207ENST00000488921 COX19Q49B96 90 aa9.02□□□□□ -0.97
SPTLC1-207ENST00000488921 GATD1Q8NB37 220 aa9.02□□□□□ -0.97
SPTLC1-207ENST00000488921 TRAV26-2A0A0B4J265 109 aa9.01□□□□□ -0.97
SPTLC1-207ENST00000488921 PLA2G1BP04054 148 aaKnown RBP9.01□□□□□ -0.97
SPTLC1-207ENST00000488921 LINC01620Q4KN68 170 aa9.01□□□□□ -0.97
SPTLC1-207ENST00000488921 CBLN2Q8IUK8 224 aa9.01□□□□□ -0.97
SPTLC1-207ENST00000488921 C20orf203Q8NBC4 194 aa9.01□□□□□ -0.97
SPTLC1-207ENST00000488921 A0A1B0GXF2 115 aa9□□□□□ -0.97
SPTLC1-207ENST00000488921 NCR2O95944 276 aa9□□□□□ -0.97
SPTLC1-207ENST00000488921 DGAT2L7PQ6IED9 249 aa9□□□□□ -0.97
SPTLC1-207ENST00000488921 SCXQ7RTU7 201 aa9□□□□□ -0.97
SPTLC1-207ENST00000488921 IGLV4-60A0A075B6I1 120 aa8.99□□□□□ -0.97
SPTLC1-207ENST00000488921 IGLV10-54A0A075B6I4 117 aa8.99□□□□□ -0.97
SPTLC1-207ENST00000488921 TRBV24-1A0A075B6N3 115 aa8.99□□□□□ -0.97
SPTLC1-207ENST00000488921 TGIF2-C20orf24A0A0A6YYL0 155 aa8.99□□□□□ -0.97
SPTLC1-207ENST00000488921 LINC00528Q8N1L1 170 aa8.99□□□□□ -0.97
SPTLC1-207ENST00000488921 RPL39LQ96EH5 51 aaKnown RBP8.99□□□□□ -0.97
SPTLC1-207ENST00000488921 CHAC1Q9BUX1 264 aa8.99□□□□□ -0.97
SPTLC1-207ENST00000488921 SDHAF1A6NFY7 115 aa8.98□□□□□ -0.97
SPTLC1-207ENST00000488921 APCSP02743 223 aa8.98□□□□□ -0.97
SPTLC1-207ENST00000488921 PRSS1P07477 247 aa8.98□□□□□ -0.97
SPTLC1-207ENST00000488921 FAM104BQ5XKR9 115 aa8.98□□□□□ -0.97
SPTLC1-207ENST00000488921 KRTAP26-1Q6PEX3 210 aa8.98□□□□□ -0.97
SPTLC1-207ENST00000488921 AMN1Q8IY45 258 aa8.98□□□□□ -0.97
SPTLC1-207ENST00000488921 GNB1LQ9BYB4 327 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms