RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
CLIC4-202ENST00000488683 AZU1P20160 251 aa9.25□□□□□ -0.93
CLIC4-202ENST00000488683 FAM104AQ969W3 186 aa9.25□□□□□ -0.93
CLIC4-202ENST00000488683 TSSC4Q9Y5U2 329 aaPredicted RBP9.25□□□□□ -0.93
CLIC4-202ENST00000488683 IGLV4-3A0A075B6K6 122 aa9.25□□□□□ -0.93
CLIC4-202ENST00000488683 TRAV2A0A0B4J234 112 aa9.25□□□□□ -0.93
CLIC4-202ENST00000488683 C20orf203Q8NBC4 194 aa9.25□□□□□ -0.93
CLIC4-202ENST00000488683 VWFP04275 2813 aa9.24□□□□□ -0.93
CLIC4-202ENST00000488683 H3BMM0 161 aa9.24□□□□□ -0.93
CLIC4-202ENST00000488683 UBE2D1P51668 147 aa9.24□□□□□ -0.93
CLIC4-202ENST00000488683 GAGE13Q4V321 117 aa9.24□□□□□ -0.93
CLIC4-202ENST00000488683 PAPPA-AS1Q5QFB9 102 aa9.24□□□□□ -0.93
CLIC4-202ENST00000488683 Q6ZSV7 163 aa9.24□□□□□ -0.93
CLIC4-202ENST00000488683 TRGV11A0A075B6L2 103 aa9.24□□□□□ -0.93
CLIC4-202ENST00000488683 I3L3M4 83 aa9.24□□□□□ -0.93
CLIC4-202ENST00000488683 CFC1BP0CG36 223 aa9.24□□□□□ -0.93
CLIC4-202ENST00000488683 CFC1P0CG37 223 aa9.24□□□□□ -0.93
CLIC4-202ENST00000488683 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
CLIC4-202ENST00000488683 HERVK_113P61574 105 aa9.24□□□□□ -0.93
CLIC4-202ENST00000488683 RHOHQ15669 191 aa9.24□□□□□ -0.93
CLIC4-202ENST00000488683 IGHV3-53P01767 116 aa9.23□□□□□ -0.93
CLIC4-202ENST00000488683 ZNF22P17026 224 aaPredicted RBP9.23□□□□□ -0.93
CLIC4-202ENST00000488683 LGALS3P17931 250 aaKnown RBP9.23□□□□□ -0.93
CLIC4-202ENST00000488683 LINC01587Q99440 93 aa9.23□□□□□ -0.93
CLIC4-202ENST00000488683 PRO0461Q9UI25 63 aa9.23□□□□□ -0.93
CLIC4-202ENST00000488683 IGHV3-30P01768 117 aa9.23□□□□□ -0.93
CLIC4-202ENST00000488683 IGHV3-30-5P0DP03 117 aa9.23□□□□□ -0.93
CLIC4-202ENST00000488683 PLA2G2AP14555 144 aa9.22□□□□□ -0.93
CLIC4-202ENST00000488683 NFE4Q86UQ8 179 aa9.22□□□□□ -0.93
CLIC4-202ENST00000488683 WFDC10AQ9H1F0 79 aa9.22□□□□□ -0.93
CLIC4-202ENST00000488683 VCX2Q9H322 139 aa9.22□□□□□ -0.93
CLIC4-202ENST00000488683 NDUFA7O95182 113 aa9.22□□□□□ -0.93
CLIC4-202ENST00000488683 SMAGPQ0VAQ4 97 aa9.22□□□□□ -0.93
CLIC4-202ENST00000488683 NDUFA11Q86Y39 141 aa9.22□□□□□ -0.93
CLIC4-202ENST00000488683 WFDC11Q8NEX6 87 aa9.22□□□□□ -0.93
CLIC4-202ENST00000488683 MAP6D1Q9H9H5 199 aa9.22□□□□□ -0.93
CLIC4-202ENST00000488683 PDZD2O15018 2839 aa9.22□□□□□ -0.93
CLIC4-202ENST00000488683 DEFB113Q30KQ7 82 aa9.21□□□□□ -0.93
CLIC4-202ENST00000488683 Q8N2B8 174 aa9.21□□□□□ -0.93
CLIC4-202ENST00000488683 ZNF843Q8N446 348 aa9.21□□□□□ -0.93
CLIC4-202ENST00000488683 C10orf126Q8N4M7 172 aa9.21□□□□□ -0.93
CLIC4-202ENST00000488683 DAND5Q8N907 189 aa9.21□□□□□ -0.93
CLIC4-202ENST00000488683 DYNLRB2Q8TF09 96 aa9.21□□□□□ -0.93
CLIC4-202ENST00000488683 TMEM223A0PJW6 202 aa9.21□□□□□ -0.94
CLIC4-202ENST00000488683 A4D1N5 150 aa9.21□□□□□ -0.94
CLIC4-202ENST00000488683 RHODO00212 210 aa9.21□□□□□ -0.94
CLIC4-202ENST00000488683 A8MTW9 85 aa9.2□□□□□ -0.94
CLIC4-202ENST00000488683 F8W1H4 67 aa9.2□□□□□ -0.94
CLIC4-202ENST00000488683 TCL1BO95988 128 aa9.2□□□□□ -0.94
CLIC4-202ENST00000488683 SPINK8P0C7L1 97 aa9.2□□□□□ -0.94
CLIC4-202ENST00000488683 KRTAP1-3Q8IUG1 177 aa9.2□□□□□ -0.94
CLIC4-202ENST00000488683 MUSTN1Q8IVN3 82 aa9.2□□□□□ -0.94
CLIC4-202ENST00000488683 SLC25A29Q8N8R3 303 aa9.2□□□□□ -0.94
CLIC4-202ENST00000488683 TNFRSF18Q9Y5U5 241 aa9.2□□□□□ -0.94
CLIC4-202ENST00000488683 A0A0U1RRA0 63 aa9.2□□□□□ -0.94
CLIC4-202ENST00000488683 LINC00467Q9BRT7 94 aa9.2□□□□□ -0.94
CLIC4-202ENST00000488683 TMEM238LA0A1B0GVL6 79 aa9.19□□□□□ -0.94
CLIC4-202ENST00000488683 A6NJY4 79 aa9.19□□□□□ -0.94
CLIC4-202ENST00000488683 NOTCH2Q04721 2471 aa9.19□□□□□ -0.94
CLIC4-202ENST00000488683 HELZ2Q9BYK8 2649 aaKnown RBP9.19□□□□□ -0.94
CLIC4-202ENST00000488683 ANK3Q12955 4377 aaKnown RBP9.19□□□□□ -0.94
CLIC4-202ENST00000488683 CFAP126Q5VTH2 177 aa9.19□□□□□ -0.94
CLIC4-202ENST00000488683 Q6ZUT4 128 aa9.19□□□□□ -0.94
CLIC4-202ENST00000488683 C4orf3Q8WVX3 66 aa9.18□□□□□ -0.94
CLIC4-202ENST00000488683 PRSS2P07478 247 aa9.18□□□□□ -0.94
CLIC4-202ENST00000488683 SCGB1C2P0DMR2 95 aa9.18□□□□□ -0.94
CLIC4-202ENST00000488683 ADAMTSL4-AS1Q5T5F5 129 aa9.18□□□□□ -0.94
CLIC4-202ENST00000488683 C11orf72Q8NBR9 251 aa9.18□□□□□ -0.94
CLIC4-202ENST00000488683 M0R2P5 195 aa9.18□□□□□ -0.94
CLIC4-202ENST00000488683 IGHV3-30-3P0DP02 117 aa9.18□□□□□ -0.94
CLIC4-202ENST00000488683 ESM1Q9NQ30 184 aa9.18□□□□□ -0.94
CLIC4-202ENST00000488683 LEPROTO15243 131 aa9.17□□□□□ -0.94
CLIC4-202ENST00000488683 DEFB114Q30KQ6 69 aa9.17□□□□□ -0.94
CLIC4-202ENST00000488683 ZNF625Q96I27 306 aaPredicted RBP9.17□□□□□ -0.94
CLIC4-202ENST00000488683 EDA2RQ9HAV5 297 aa9.17□□□□□ -0.94
CLIC4-202ENST00000488683 PEMTQ9UBM1 199 aa9.17□□□□□ -0.94
CLIC4-202ENST00000488683 FASNP49327 2511 aaKnown RBP9.17□□□□□ -0.94
CLIC4-202ENST00000488683 FHL3Q13643 280 aa9.17□□□□□ -0.94
CLIC4-202ENST00000488683 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.17□□□□□ -0.94
CLIC4-202ENST00000488683 CHCHD7Q9BUK0 85 aa9.17□□□□□ -0.94
CLIC4-202ENST00000488683 UBE2D3P61077 147 aa9.16□□□□□ -0.94
CLIC4-202ENST00000488683 UBE2D2P62837 147 aa9.16□□□□□ -0.94
CLIC4-202ENST00000488683 ODF3L2Q3SX64 289 aa9.16□□□□□ -0.94
CLIC4-202ENST00000488683 GAGE12HA6NDE8 117 aa9.16□□□□□ -0.94
CLIC4-202ENST00000488683 ZNF415Q09FC8 603 aa9.16□□□□□ -0.94
CLIC4-202ENST00000488683 TRGV1A0A0A0MS02 117 aa9.15□□□□□ -0.94
CLIC4-202ENST00000488683 A0A0J9YXY3 114 aa9.15□□□□□ -0.94
CLIC4-202ENST00000488683 A8MWV9 139 aa9.15□□□□□ -0.94
CLIC4-202ENST00000488683 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
CLIC4-202ENST00000488683 HECTD1Q9ULT8 2610 aa9.15□□□□□ -0.94
CLIC4-202ENST00000488683 TIMM21Q9BVV7 248 aa9.15□□□□□ -0.95
CLIC4-202ENST00000488683 COX6A2Q02221 97 aa9.14□□□□□ -0.95
CLIC4-202ENST00000488683 Q1RN00 199 aa9.14□□□□□ -0.95
CLIC4-202ENST00000488683 PYGO1Q9Y3Y4 419 aa9.14□□□□□ -0.95
CLIC4-202ENST00000488683 DNAJC9-AS1A6NH13 148 aa9.14□□□□□ -0.95
CLIC4-202ENST00000488683 Q6ZTI0 123 aa9.14□□□□□ -0.95
CLIC4-202ENST00000488683 PRO1854Q9UHT4 67 aa9.14□□□□□ -0.95
CLIC4-202ENST00000488683 UBE2D4Q9Y2X8 147 aa9.14□□□□□ -0.95
CLIC4-202ENST00000488683 MRPS36P82909 103 aaKnown RBP9.13□□□□□ -0.95
CLIC4-202ENST00000488683 C1orf158Q8N1D5 194 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms