RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 CLPSL1A2RUU4 121 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 M0R1B8 84 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 BCE1O60756 84 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 PRSS2P07478 247 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 BAALC-AS2P0C853 105 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 SEC61GP60059 68 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 KLRB1Q12918 225 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 ATP5EP2Q5VTU8 51 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 HIST2H2BCQ6DN03 193 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 HIST2H2BDQ6DRA6 164 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 C9orf139Q6ZV77 190 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 VSIG2Q96IQ7 327 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 ZNF580Q9UK33 172 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 MED13Q9UHV7 2174 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 FRYQ5TBA9 3013 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 ZGRF1Q86YA3 2104 aa3.46□□□□□ -1.86
CDC42BPA-213ENST00000488131 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 M0R1W7 72 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 NDUFA1O15239 70 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 DNAL4O96015 105 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 RPL35AP18077 110 aaKnown RBP3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 S100A4P26447 101 aaKnown RBP3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 VMO1Q7Z5L0 202 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 C10orf105Q8TEF2 133 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 COPS9Q8WXC6 57 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 OVOL2Q9BRP0 275 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 S4R3C0 116 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 ZNF318Q5VUA4 2279 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 IGHV3-64A0A075B6Q5 118 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 IGHG2P01859 326 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 NDPQ00604 133 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 LYPD2Q6UXB3 125 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 Q8N2B8 174 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 FAM104AQ969W3 186 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 V9GYY9 64 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 PLCE1Q9P212 2302 aa3.45□□□□□ -1.86
CDC42BPA-213ENST00000488131 IGLV5-45A0A087WSX0 123 aa3.44□□□□□ -1.86
CDC42BPA-213ENST00000488131 SMIM26A0A096LP01 95 aa3.44□□□□□ -1.86
CDC42BPA-213ENST00000488131 FAM223BA6NKX1 122 aa3.44□□□□□ -1.86
CDC42BPA-213ENST00000488131 M0QY20 66 aa3.44□□□□□ -1.86
CDC42BPA-213ENST00000488131 PIK3CD-AS1Q5SR53 167 aa3.44□□□□□ -1.86
CDC42BPA-213ENST00000488131 LINC00308Q8TCZ7 52 aa3.44□□□□□ -1.86
CDC42BPA-213ENST00000488131 OPRPNQ99935 248 aaPredicted RBP3.44□□□□□ -1.86
CDC42BPA-213ENST00000488131 TMEM243Q9BU79 118 aa3.44□□□□□ -1.86
CDC42BPA-213ENST00000488131 CADP27708 2225 aa3.44□□□□□ -1.86
CDC42BPA-213ENST00000488131 KIAA0100Q14667 2235 aaKnown RBP3.44□□□□□ -1.86
CDC42BPA-213ENST00000488131 MUC4Q99102 2169 aa3.44□□□□□ -1.86
CDC42BPA-213ENST00000488131 A0A087WVE0 104 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 TRBV10-3A0A0K0K1G6 114 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 H7BZZ5 65 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 SOCS3O14543 225 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 KLKP1Q107X0 134 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 LYPD5Q6UWN5 251 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 FP248Q71RG6 208 aaPredicted RBP3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 Q8N6K4 173 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 LY6G5BQ8NDX9 201 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 FAM218AQ96MZ4 157 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 LINC00846Q9NV44 126 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 SPTBN5Q9NRC6 3674 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 IGKV3D-7A0A0C4DH55 119 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 RBMY1BA6NDE4 496 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 RBMY1EA6NEQ0 496 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 IGHV3-23P01764 117 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 IGF1P05019 195 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 RBMY1DP0C7P1 496 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 RBMY1A1P0DJD3 496 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 RBMY1CP0DJD4 496 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 CD28P10747 220 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 RPL28P46779 137 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 XCL1P47992 114 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 RBMY1FQ15415 496 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 S100A7L2Q5SY68 101 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 FAM223AQ8IWN6 122 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 MAP6D1Q9H9H5 199 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 XCL2Q9UBD3 114 aa3.43□□□□□ -1.86
CDC42BPA-213ENST00000488131 FREM2Q5SZK8 3169 aa3.42□□□□□ -1.86
CDC42BPA-213ENST00000488131 ARHGAP32A7KAX9 2087 aa3.42□□□□□ -1.86
CDC42BPA-213ENST00000488131 TRAV12-3A0A0B4J271 114 aa3.42□□□□□ -1.86
CDC42BPA-213ENST00000488131 IGLV5-39A0A0G2JS06 123 aa3.42□□□□□ -1.86
CDC42BPA-213ENST00000488131 KNCNA6PVL3 124 aa3.42□□□□□ -1.86
CDC42BPA-213ENST00000488131 KLLNB2CW77 178 aa3.42□□□□□ -1.86
CDC42BPA-213ENST00000488131 GNRH2O43555 120 aa3.42□□□□□ -1.86
CDC42BPA-213ENST00000488131 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-213ENST00000488131 CIRBPQ14011 172 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-213ENST00000488131 C1orf195Q5TG92 126 aa3.42□□□□□ -1.86
CDC42BPA-213ENST00000488131 DPM3Q9P2X0 92 aa3.42□□□□□ -1.86
CDC42BPA-213ENST00000488131 NACAE9PAV3 2078 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 IGHV3OR16-8A0A075B7F1 116 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 ODF3BA8MYP8 253 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 TRBV12-3P01733 135 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 COX7A1P24310 79 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 C15orf32Q32M92 178 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 SOSTDC1Q6X4U4 206 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 RNASE6Q93091 150 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 PKIGQ9Y2B9 76 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 FRYLO94915 3013 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 AHCTF1Q8WYP5 2266 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms