RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 CASKIN1Q8WXD9 1431 aa-0.52□□□□□ -2.49
CCDC66-221ENST00000487739 HECTD4Q9Y4D8 3996 aa-0.52□□□□□ -2.49
CCDC66-221ENST00000487739 CBLN1P23435 193 aa-0.52□□□□□ -2.49
CCDC66-221ENST00000487739 Q5VV11 94 aa-0.52□□□□□ -2.49
CCDC66-221ENST00000487739 ZNF818PQ6ZRF7 136 aa-0.52□□□□□ -2.49
CCDC66-221ENST00000487739 SPTSSAQ969W0 71 aa-0.52□□□□□ -2.49
CCDC66-221ENST00000487739 PATJQ8NI35 1801 aa-0.52□□□□□ -2.49
CCDC66-221ENST00000487739 DOCK2Q92608 1830 aa-0.52□□□□□ -2.49
CCDC66-221ENST00000487739 C2CD3Q4AC94 2353 aa-0.53□□□□□ -2.49
CCDC66-221ENST00000487739 FHAD1B1AJZ9 1412 aa-0.53□□□□□ -2.49
CCDC66-221ENST00000487739 ZNF609O15014 1411 aa-0.53□□□□□ -2.49
CCDC66-221ENST00000487739 VWFP04275 2813 aa-0.53□□□□□ -2.49
CCDC66-221ENST00000487739 SNCGO76070 127 aa-0.53□□□□□ -2.49
CCDC66-221ENST00000487739 NCR2O95944 276 aa-0.53□□□□□ -2.49
CCDC66-221ENST00000487739 SPAG11BQ08648 103 aa-0.53□□□□□ -2.49
CCDC66-221ENST00000487739 KRTAP19-8Q3LI54 63 aa-0.53□□□□□ -2.49
CCDC66-221ENST00000487739 TSTD1Q8NFU3 115 aa-0.53□□□□□ -2.49
CCDC66-221ENST00000487739 LRP6O75581 1613 aa-0.53□□□□□ -2.49
CCDC66-221ENST00000487739 NPFFO15130 113 aa-0.54□□□□□ -2.5
CCDC66-221ENST00000487739 BCE1O60756 84 aa-0.54□□□□□ -2.5
CCDC66-221ENST00000487739 NDUFB6O95139 128 aa-0.54□□□□□ -2.5
CCDC66-221ENST00000487739 DR1Q01658 176 aa-0.54□□□□□ -2.5
CCDC66-221ENST00000487739 Q5VSD8 79 aa-0.54□□□□□ -2.5
CCDC66-221ENST00000487739 SEC11CQ9BY50 192 aa-0.54□□□□□ -2.5
CCDC66-221ENST00000487739 COL6A3P12111 3177 aa-0.55□□□□□ -2.5
CCDC66-221ENST00000487739 SPRR1AP35321 89 aa-0.55□□□□□ -2.5
CCDC66-221ENST00000487739 CCL18P55774 89 aa-0.55□□□□□ -2.5
CCDC66-221ENST00000487739 HAMPP81172 84 aa-0.55□□□□□ -2.5
CCDC66-221ENST00000487739 KRTAP20-2Q3LI61 65 aa-0.55□□□□□ -2.5
CCDC66-221ENST00000487739 Q8IZM0 81 aa-0.55□□□□□ -2.5
CCDC66-221ENST00000487739 LZICQ8WZA0 190 aa-0.55□□□□□ -2.5
CCDC66-221ENST00000487739 USF3Q68DE3 2245 aa-0.56□□□□□ -2.5
CCDC66-221ENST00000487739 PTPN13Q12923 2485 aa-0.56□□□□□ -2.5
CCDC66-221ENST00000487739 CCL8P80075 99 aa-0.56□□□□□ -2.5
CCDC66-221ENST00000487739 SCIMPQ6UWF3 145 aa-0.56□□□□□ -2.5
CCDC66-221ENST00000487739 TPT1P8Q9HAU6 139 aa-0.56□□□□□ -2.5
CCDC66-221ENST00000487739 SPCS1Q9Y6A9 102 aa-0.56□□□□□ -2.5
CCDC66-221ENST00000487739 ARAP2Q8WZ64 1704 aa-0.56□□□□□ -2.5
CCDC66-221ENST00000487739 PPP1R17O96001 155 aa-0.57□□□□□ -2.5
CCDC66-221ENST00000487739 TSC2P49815 1807 aa-0.57□□□□□ -2.5
CCDC66-221ENST00000487739 ERCC6L2Q5T890 1561 aa-0.57□□□□□ -2.5
CCDC66-221ENST00000487739 ALMS1Q8TCU4 4167 aa-0.58□□□□□ -2.5
CCDC66-221ENST00000487739 MRC1P22897 1456 aa-0.58□□□□□ -2.5
CCDC66-221ENST00000487739 COPZ1P61923 177 aa-0.58□□□□□ -2.5
CCDC66-221ENST00000487739 RPS25P62851 125 aaKnown RBP-0.58□□□□□ -2.5
CCDC66-221ENST00000487739 KCNRGQ8N5I3 272 aa-0.58□□□□□ -2.5
CCDC66-221ENST00000487739 AGPAT4-IT1Q9H0P7 198 aa-0.58□□□□□ -2.5
CCDC66-221ENST00000487739 COPZ2Q9P299 210 aa-0.58□□□□□ -2.5
CCDC66-221ENST00000487739 SBF2Q86WG5 1849 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 ZNF518AQ6AHZ1 1483 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 PXDNQ92626 1479 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 BSNQ9UPA5 3926 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 CHD6Q8TD26 2715 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 HCG22E2RYF7 251 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 M0R135 149 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 SPRR2BP35325 72 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 GUCA1AP43080 201 aaPredicted RBP-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 SDF2Q99470 211 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 C10orf71Q711Q0 1435 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 LRRC37A2A6NM11 1700 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 SVEP1Q4LDE5 3571 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 MYO7BQ6PIF6 2116 aa-0.59□□□□□ -2.5
CCDC66-221ENST00000487739 FAT2Q9NYQ8 4349 aa-0.6□□□□□ -2.5
CCDC66-221ENST00000487739 BCL9LQ86UU0 1499 aa-0.6□□□□□ -2.5
CCDC66-221ENST00000487739 IFT140Q96RY7 1462 aa-0.6□□□□□ -2.5
CCDC66-221ENST00000487739 UNC13AQ9UPW8 1703 aa-0.6□□□□□ -2.51
CCDC66-221ENST00000487739 MYOM3Q5VTT5 1437 aa-0.6□□□□□ -2.51
CCDC66-221ENST00000487739 FXYD6-FXYD2A0A087WZ82 144 aa-0.6□□□□□ -2.51
CCDC66-221ENST00000487739 CTXND1A0A1B0GTU2 59 aa-0.6□□□□□ -2.51
CCDC66-221ENST00000487739 SIX6O95475 246 aa-0.6□□□□□ -2.51
CCDC66-221ENST00000487739 ALX1Q15699 326 aa-0.6□□□□□ -2.51
CCDC66-221ENST00000487739 SMIM21Q3B7S5 101 aa-0.6□□□□□ -2.51
CCDC66-221ENST00000487739 ANP32BQ92688 251 aaKnown RBP-0.6□□□□□ -2.51
CCDC66-221ENST00000487739 R4GMQ9 66 aa-0.6□□□□□ -2.51
CCDC66-221ENST00000487739 NBEAL1Q6ZS30 2694 aa-0.6□□□□□ -2.51
CCDC66-221ENST00000487739 PI4KAP42356 2102 aa-0.61□□□□□ -2.51
CCDC66-221ENST00000487739 KIF21AQ7Z4S6 1674 aa-0.61□□□□□ -2.51
CCDC66-221ENST00000487739 TRAV13-2A0A0B4J235 113 aa-0.61□□□□□ -2.51
CCDC66-221ENST00000487739 RBM3P98179 157 aaKnown RBP-0.61□□□□□ -2.51
CCDC66-221ENST00000487739 C10orf128Q5T292 105 aa-0.61□□□□□ -2.51
CCDC66-221ENST00000487739 TP53AIP1Q9HCN2 124 aa-0.61□□□□□ -2.51
CCDC66-221ENST00000487739 LRP1BQ9NZR2 4599 aa-0.61□□□□□ -2.51
CCDC66-221ENST00000487739 PIEZO2Q9H5I5 2752 aa-0.61□□□□□ -2.51
CCDC66-221ENST00000487739 FLNBO75369 2602 aaKnown RBP-0.61□□□□□ -2.51
CCDC66-221ENST00000487739 NF1P21359 2839 aa-0.62□□□□□ -2.51
CCDC66-221ENST00000487739 FLGP20930 4061 aaPredicted RBP-0.62□□□□□ -2.51
CCDC66-221ENST00000487739 CSPG4Q6UVK1 2322 aa-0.62□□□□□ -2.51
CCDC66-221ENST00000487739 PAPPAQ13219 1627 aa-0.62□□□□□ -2.51
CCDC66-221ENST00000487739 I3L2K1 104 aa-0.62□□□□□ -2.51
CCDC66-221ENST00000487739 HIST1H1DP16402 221 aaKnown RBP-0.62□□□□□ -2.51
CCDC66-221ENST00000487739 MAFIPQ8WZ33 124 aa-0.62□□□□□ -2.51
CCDC66-221ENST00000487739 MYH7P12883 1935 aa-0.62□□□□□ -2.51
CCDC66-221ENST00000487739 LAMA5O15230 3695 aa-0.63□□□□□ -2.51
CCDC66-221ENST00000487739 SPTBN1Q01082 2364 aaKnown RBP-0.63□□□□□ -2.51
CCDC66-221ENST00000487739 PSME4Q14997 1843 aa-0.63□□□□□ -2.51
CCDC66-221ENST00000487739 SETXQ7Z333 2677 aaKnown RBP-0.63□□□□□ -2.51
CCDC66-221ENST00000487739 SPAARA0A1B0GVQ0 90 aa-0.63□□□□□ -2.51
CCDC66-221ENST00000487739 K7EQZ3 153 aa-0.63□□□□□ -2.51
CCDC66-221ENST00000487739 S100A3P33764 101 aa-0.63□□□□□ -2.51
CCDC66-221ENST00000487739 SMCO1Q147U7 214 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms